PMC:1310901 / 3965-4128 JSONTXT

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    GO-CC

    {"project":"GO-CC","denotations":[{"id":"T2362","span":{"begin":41,"end":45},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"De novo DNA methylation of genes such as cell cycle, DNA repair, apoptosis and tumor suppressor genes is therefore thought to be involved in tumorigenesis (15–17)."}

    sentences

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    2_test

    {"project":"2_test","denotations":[{"id":"16396836-9639410-76538175","span":{"begin":156,"end":158},"obj":"9639410"},{"id":"16396836-10729832-76538175","span":{"begin":156,"end":158},"obj":"10729832"},{"id":"16396836-11748635-76538175","span":{"begin":156,"end":158},"obj":"11748635"}],"text":"De novo DNA methylation of genes such as cell cycle, DNA repair, apoptosis and tumor suppressor genes is therefore thought to be involved in tumorigenesis (15–17)."}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T1476","span":{"begin":0,"end":2},"obj":"FW"},{"id":"T1477","span":{"begin":3,"end":7},"obj":"FW"},{"id":"T1478","span":{"begin":8,"end":11},"obj":"NN"},{"id":"T1479","span":{"begin":12,"end":23},"obj":"NN"},{"id":"T1480","span":{"begin":24,"end":26},"obj":"IN"},{"id":"T1481","span":{"begin":27,"end":32},"obj":"NN"},{"id":"T1482","span":{"begin":33,"end":37},"obj":"JJ"},{"id":"T1483","span":{"begin":38,"end":40},"obj":"IN"},{"id":"T1484","span":{"begin":41,"end":45},"obj":"NN"},{"id":"T1485","span":{"begin":46,"end":51},"obj":"NN"},{"id":"T1486","span":{"begin":51,"end":52},"obj":"-COMMA-"},{"id":"T1487","span":{"begin":53,"end":56},"obj":"NN"},{"id":"T1488","span":{"begin":57,"end":63},"obj":"NN"},{"id":"T1489","span":{"begin":63,"end":64},"obj":"-COMMA-"},{"id":"T1490","span":{"begin":65,"end":74},"obj":"NN"},{"id":"T1491","span":{"begin":75,"end":78},"obj":"CC"},{"id":"T1492","span":{"begin":79,"end":84},"obj":"NN"},{"id":"T1493","span":{"begin":85,"end":95},"obj":"NN"},{"id":"T1494","span":{"begin":96,"end":101},"obj":"NN"},{"id":"T1495","span":{"begin":102,"end":104},"obj":"VB"},{"id":"T1496","span":{"begin":105,"end":114},"obj":"RB"},{"id":"T1497","span":{"begin":115,"end":122},"obj":"VB"},{"id":"T1498","span":{"begin":123,"end":125},"obj":"TO"},{"id":"T1499","span":{"begin":126,"end":128},"obj":"VB"},{"id":"T1500","span":{"begin":129,"end":137},"obj":"VB"},{"id":"T1501","span":{"begin":138,"end":140},"obj":"IN"},{"id":"T1502","span":{"begin":141,"end":154},"obj":"NN"},{"id":"T1503","span":{"begin":155,"end":156},"obj":"-LRB-"},{"id":"T1504","span":{"begin":156,"end":161},"obj":"CD"},{"id":"T1505","span":{"begin":161,"end":162},"obj":"-RRB-"}],"relations":[{"id":"R1141","pred":"arg1Of","subj":"T1477","obj":"T1476"},{"id":"R1142","pred":"arg1Of","subj":"T1479","obj":"T1477"},{"id":"R1143","pred":"arg1Of","subj":"T1479","obj":"T1478"},{"id":"R1144","pred":"arg1Of","subj":"T1479","obj":"T1480"},{"id":"R1145","pred":"arg1Of","subj":"T1479","obj":"T1495"},{"id":"R1146","pred":"arg2Of","subj":"T1479","obj":"T1497"},{"id":"R1147","pred":"arg1Of","subj":"T1479","obj":"T1499"},{"id":"R1148","pred":"arg2Of","subj":"T1479","obj":"T1500"},{"id":"R1149","pred":"arg2Of","subj":"T1481","obj":"T1480"},{"id":"R1150","pred":"arg1Of","subj":"T1481","obj":"T1483"},{"id":"R1151","pred":"arg1Of","subj":"T1483","obj":"T1482"},{"id":"R1152","pred":"arg1Of","subj":"T1485","obj":"T1484"},{"id":"R1153","pred":"arg1Of","subj":"T1485","obj":"T1486"},{"id":"R1154","pred":"arg1Of","subj":"T1486","obj":"T1489"},{"id":"R1155","pred":"arg2Of","subj":"T1488","obj":"T1486"},{"id":"R1156","pred":"arg1Of","subj":"T1488","obj":"T1487"},{"id":"R1157","pred":"arg1Of","subj":"T1489","obj":"T1491"},{"id":"R1158","pred":"arg2Of","subj":"T1490","obj":"T1489"},{"id":"R1159","pred":"arg2Of","subj":"T1491","obj":"T1483"},{"id":"R1160","pred":"arg2Of","subj":"T1494","obj":"T1491"},{"id":"R1161","pred":"arg1Of","subj":"T1494","obj":"T1492"},{"id":"R1162","pred":"arg1Of","subj":"T1494","obj":"T1493"},{"id":"R1163","pred":"arg2Of","subj":"T1497","obj":"T1495"},{"id":"R1164","pred":"arg1Of","subj":"T1497","obj":"T1496"},{"id":"R1165","pred":"arg3Of","subj":"T1500","obj":"T1497"},{"id":"R1166","pred":"arg1Of","subj":"T1500","obj":"T1498"},{"id":"R1167","pred":"arg2Of","subj":"T1500","obj":"T1499"},{"id":"R1168","pred":"arg1Of","subj":"T1500","obj":"T1501"},{"id":"R1169","pred":"arg2Of","subj":"T1502","obj":"T1501"},{"id":"R1170","pred":"arg1Of","subj":"T1502","obj":"T1503"},{"id":"R1171","pred":"arg2Of","subj":"T1504","obj":"T1503"},{"id":"R1172","pred":"arg3Of","subj":"T1505","obj":"T1503"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"De novo DNA methylation of genes such as cell cycle, DNA repair, apoptosis and tumor suppressor genes is therefore thought to be involved in tumorigenesis (15–17)."}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T2118","span":{"begin":0,"end":2},"obj":"NNP"},{"id":"T2119","span":{"begin":3,"end":7},"obj":"NNP"},{"id":"T2120","span":{"begin":8,"end":11},"obj":"NNP"},{"id":"T2121","span":{"begin":12,"end":23},"obj":"NN"},{"id":"T2122","span":{"begin":24,"end":26},"obj":"IN"},{"id":"T2123","span":{"begin":27,"end":32},"obj":"NNS"},{"id":"T2124","span":{"begin":33,"end":37},"obj":"JJ"},{"id":"T2125","span":{"begin":38,"end":40},"obj":"IN"},{"id":"T2126","span":{"begin":41,"end":45},"obj":"NN"},{"id":"T2127","span":{"begin":46,"end":51},"obj":"NN"},{"id":"T2128","span":{"begin":51,"end":52},"obj":","},{"id":"T2129","span":{"begin":53,"end":56},"obj":"NNP"},{"id":"T2130","span":{"begin":57,"end":63},"obj":"NN"},{"id":"T2131","span":{"begin":63,"end":64},"obj":","},{"id":"T2132","span":{"begin":65,"end":74},"obj":"NN"},{"id":"T2133","span":{"begin":75,"end":78},"obj":"CC"},{"id":"T2134","span":{"begin":79,"end":84},"obj":"NN"},{"id":"T2135","span":{"begin":85,"end":95},"obj":"NN"},{"id":"T2136","span":{"begin":96,"end":101},"obj":"NNS"},{"id":"T2137","span":{"begin":102,"end":104},"obj":"VBZ"},{"id":"T2138","span":{"begin":105,"end":114},"obj":"RB"},{"id":"T2139","span":{"begin":115,"end":122},"obj":"VBN"},{"id":"T2140","span":{"begin":123,"end":125},"obj":"TO"},{"id":"T2141","span":{"begin":126,"end":128},"obj":"VB"},{"id":"T2142","span":{"begin":129,"end":137},"obj":"VBN"},{"id":"T2143","span":{"begin":138,"end":140},"obj":"IN"},{"id":"T2144","span":{"begin":141,"end":154},"obj":"NN"},{"id":"T2145","span":{"begin":155,"end":156},"obj":"-LRB-"},{"id":"T2146","span":{"begin":156,"end":158},"obj":"CD"},{"id":"T2147","span":{"begin":159,"end":161},"obj":"CD"},{"id":"T2148","span":{"begin":161,"end":162},"obj":"-RRB-"},{"id":"T2149","span":{"begin":162,"end":163},"obj":"."}],"relations":[{"id":"R1683","pred":"punct","subj":"T2149","obj":"T2139"},{"id":"R1900","pred":"compound","subj":"T2118","obj":"T2120"},{"id":"R1903","pred":"compound","subj":"T2119","obj":"T2120"},{"id":"R1907","pred":"compound","subj":"T2120","obj":"T2121"},{"id":"R1914","pred":"nsubjpass","subj":"T2121","obj":"T2139"},{"id":"R1918","pred":"prep","subj":"T2122","obj":"T2121"},{"id":"R1922","pred":"pobj","subj":"T2123","obj":"T2122"},{"id":"R1924","pred":"amod","subj":"T2124","obj":"T2125"},{"id":"R1926","pred":"prep","subj":"T2125","obj":"T2123"},{"id":"R1927","pred":"compound","subj":"T2126","obj":"T2127"},{"id":"R1928","pred":"pobj","subj":"T2127","obj":"T2125"},{"id":"R1929","pred":"punct","subj":"T2128","obj":"T2121"},{"id":"R1930","pred":"compound","subj":"T2129","obj":"T2130"},{"id":"R1931","pred":"conj","subj":"T2130","obj":"T2121"},{"id":"R1932","pred":"punct","subj":"T2131","obj":"T2130"},{"id":"R1933","pred":"conj","subj":"T2132","obj":"T2130"},{"id":"R1934","pred":"cc","subj":"T2133","obj":"T2132"},{"id":"R1935","pred":"compound","subj":"T2134","obj":"T2136"},{"id":"R1936","pred":"compound","subj":"T2135","obj":"T2136"},{"id":"R1937","pred":"conj","subj":"T2136","obj":"T2132"},{"id":"R1938","pred":"auxpass","subj":"T2137","obj":"T2139"},{"id":"R1939","pred":"advmod","subj":"T2138","obj":"T2139"},{"id":"R1940","pred":"ROOT","subj":"T2139","obj":"T2139"},{"id":"R1941","pred":"aux","subj":"T2140","obj":"T2142"},{"id":"R1942","pred":"auxpass","subj":"T2141","obj":"T2142"},{"id":"R1943","pred":"xcomp","subj":"T2142","obj":"T2139"},{"id":"R1944","pred":"prep","subj":"T2143","obj":"T2142"},{"id":"R1945","pred":"pobj","subj":"T2144","obj":"T2143"},{"id":"R1946","pred":"punct","subj":"T2145","obj":"T2147"},{"id":"R1947","pred":"nummod","subj":"T2146","obj":"T2147"},{"id":"R1948","pred":"ROOT","subj":"T2147","obj":"T2147"},{"id":"R1949","pred":"punct","subj":"T2148","obj":"T2147"}],"text":"De novo DNA methylation of genes such as cell cycle, DNA repair, apoptosis and tumor suppressor genes is therefore thought to be involved in tumorigenesis (15–17)."}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T1083","span":{"begin":65,"end":74},"obj":"http://purl.obolibrary.org/obo/GO_0006915"},{"id":"T1085","span":{"begin":65,"end":74},"obj":"http://purl.obolibrary.org/obo/GO_0097194"},{"id":"T1092","span":{"begin":12,"end":23},"obj":"http://purl.obolibrary.org/obo/GO_0032259"},{"id":"T1098","span":{"begin":41,"end":51},"obj":"http://purl.obolibrary.org/obo/GO_0007049"},{"id":"T1099","span":{"begin":41,"end":56},"obj":"http://purl.obolibrary.org/obo/GO_0044786"},{"id":"T1100","span":{"begin":53,"end":63},"obj":"http://purl.obolibrary.org/obo/GO_0006281"},{"id":"T1101","span":{"begin":79,"end":95},"obj":"http://purl.obolibrary.org/obo/GO_0051726"}],"text":"De novo DNA methylation of genes such as cell cycle, DNA repair, apoptosis and tumor suppressor genes is therefore thought to be involved in tumorigenesis (15–17)."}