PMC:1310901 / 3442-3567
Annnotations
bionlp-st-ge-2016-reference-eval
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events-check-again
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2_test
{"project":"2_test","denotations":[{"id":"16396836-8999800-76538171","span":{"begin":2,"end":4},"obj":"8999800"},{"id":"16396836-11013272-76538172","span":{"begin":87,"end":88},"obj":"11013272"}],"text":" (12), and the impaired expression of IRF-4 in CML was predominately found in T-cells (3). These data suggest a crucial role "}
pmc-enju-pas
{"project":"pmc-enju-pas","denotations":[{"id":"T1382","span":{"begin":1,"end":2},"obj":"-LRB-"},{"id":"T1383","span":{"begin":2,"end":4},"obj":"CD"},{"id":"T1384","span":{"begin":4,"end":5},"obj":"-RRB-"},{"id":"T1385","span":{"begin":5,"end":6},"obj":"-COMMA-"},{"id":"T1386","span":{"begin":7,"end":10},"obj":"CC"},{"id":"T1387","span":{"begin":11,"end":14},"obj":"DT"},{"id":"T1388","span":{"begin":15,"end":23},"obj":"JJ"},{"id":"T1389","span":{"begin":24,"end":34},"obj":"NN"},{"id":"T1390","span":{"begin":35,"end":37},"obj":"IN"},{"id":"T1391","span":{"begin":38,"end":43},"obj":"NN"},{"id":"T1392","span":{"begin":44,"end":46},"obj":"IN"},{"id":"T1393","span":{"begin":47,"end":50},"obj":"NN"},{"id":"T1394","span":{"begin":51,"end":54},"obj":"VB"},{"id":"T1395","span":{"begin":55,"end":68},"obj":"RB"},{"id":"T1396","span":{"begin":69,"end":74},"obj":"VB"},{"id":"T1397","span":{"begin":75,"end":77},"obj":"IN"},{"id":"T1398","span":{"begin":78,"end":85},"obj":"NN"},{"id":"T1399","span":{"begin":86,"end":87},"obj":"-LRB-"},{"id":"T1400","span":{"begin":87,"end":88},"obj":"CD"},{"id":"T1401","span":{"begin":88,"end":89},"obj":"-RRB-"},{"id":"T1402","span":{"begin":91,"end":96},"obj":"DT"},{"id":"T1403","span":{"begin":97,"end":101},"obj":"NN"},{"id":"T1404","span":{"begin":102,"end":109},"obj":"VB"},{"id":"T1405","span":{"begin":110,"end":111},"obj":"DT"},{"id":"T1406","span":{"begin":112,"end":119},"obj":"JJ"},{"id":"T1407","span":{"begin":120,"end":124},"obj":"NN"}],"relations":[{"id":"R1049","pred":"arg2Of","subj":"T1383","obj":"T1382"},{"id":"R1050","pred":"arg3Of","subj":"T1384","obj":"T1382"},{"id":"R1053","pred":"arg1Of","subj":"T1386","obj":"T1385"},{"id":"R1054","pred":"arg1Of","subj":"T1389","obj":"T1387"},{"id":"R1055","pred":"arg1Of","subj":"T1389","obj":"T1388"},{"id":"R1056","pred":"arg1Of","subj":"T1389","obj":"T1390"},{"id":"R1057","pred":"arg1Of","subj":"T1389","obj":"T1392"},{"id":"R1058","pred":"arg1Of","subj":"T1389","obj":"T1394"},{"id":"R1059","pred":"arg2Of","subj":"T1389","obj":"T1396"},{"id":"R1060","pred":"arg2Of","subj":"T1391","obj":"T1390"},{"id":"R1061","pred":"arg2Of","subj":"T1393","obj":"T1392"},{"id":"R1062","pred":"arg2Of","subj":"T1396","obj":"T1386"},{"id":"R1063","pred":"arg2Of","subj":"T1396","obj":"T1394"},{"id":"R1064","pred":"arg1Of","subj":"T1396","obj":"T1395"},{"id":"R1065","pred":"arg1Of","subj":"T1396","obj":"T1397"},{"id":"R1066","pred":"arg2Of","subj":"T1398","obj":"T1397"},{"id":"R1067","pred":"arg1Of","subj":"T1398","obj":"T1399"},{"id":"R1068","pred":"arg2Of","subj":"T1400","obj":"T1399"},{"id":"R1069","pred":"arg3Of","subj":"T1401","obj":"T1399"},{"id":"R1070","pred":"arg1Of","subj":"T1403","obj":"T1402"},{"id":"R1071","pred":"arg1Of","subj":"T1403","obj":"T1404"},{"id":"R1072","pred":"arg2Of","subj":"T1407","obj":"T1404"},{"id":"R1073","pred":"arg1Of","subj":"T1407","obj":"T1405"},{"id":"R1074","pred":"arg1Of","subj":"T1407","obj":"T1406"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":" (12), and the impaired expression of IRF-4 in CML was predominately found in T-cells (3). These data suggest a crucial role "}
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T2020","span":{"begin":1,"end":2},"obj":"-LRB-"},{"id":"T2021","span":{"begin":2,"end":4},"obj":"CD"},{"id":"T2022","span":{"begin":4,"end":5},"obj":"-RRB-"},{"id":"T2023","span":{"begin":5,"end":6},"obj":","},{"id":"T2024","span":{"begin":7,"end":10},"obj":"CC"},{"id":"T2025","span":{"begin":11,"end":14},"obj":"DT"},{"id":"T2026","span":{"begin":15,"end":23},"obj":"VBN"},{"id":"T2027","span":{"begin":24,"end":34},"obj":"NN"},{"id":"T2028","span":{"begin":35,"end":37},"obj":"IN"},{"id":"T2029","span":{"begin":38,"end":43},"obj":"NN"},{"id":"T2030","span":{"begin":44,"end":46},"obj":"IN"},{"id":"T2031","span":{"begin":47,"end":50},"obj":"NNP"},{"id":"T2032","span":{"begin":51,"end":54},"obj":"VBD"},{"id":"T2033","span":{"begin":55,"end":68},"obj":"RB"},{"id":"T2034","span":{"begin":69,"end":74},"obj":"VBN"},{"id":"T2035","span":{"begin":75,"end":77},"obj":"IN"},{"id":"T2036","span":{"begin":78,"end":85},"obj":"NNS"},{"id":"T2037","span":{"begin":86,"end":87},"obj":"-LRB-"},{"id":"T2038","span":{"begin":87,"end":88},"obj":"CD"},{"id":"T2039","span":{"begin":88,"end":89},"obj":"-RRB-"},{"id":"T2040","span":{"begin":89,"end":90},"obj":"."},{"id":"T2041","span":{"begin":91,"end":96},"obj":"DT"},{"id":"T2042","span":{"begin":97,"end":101},"obj":"NNS"},{"id":"T2043","span":{"begin":102,"end":109},"obj":"VBP"},{"id":"T2044","span":{"begin":110,"end":111},"obj":"DT"},{"id":"T2045","span":{"begin":112,"end":119},"obj":"JJ"},{"id":"T2046","span":{"begin":120,"end":124},"obj":"NN"}],"relations":[{"id":"R1642","pred":"det","subj":"T2025","obj":"T2027"},{"id":"R1644","pred":"amod","subj":"T2026","obj":"T2027"},{"id":"R1645","pred":"nsubjpass","subj":"T2027","obj":"T2034"},{"id":"R1646","pred":"prep","subj":"T2028","obj":"T2027"},{"id":"R1648","pred":"pobj","subj":"T2029","obj":"T2028"},{"id":"R1649","pred":"prep","subj":"T2030","obj":"T2029"},{"id":"R1650","pred":"pobj","subj":"T2031","obj":"T2030"},{"id":"R1652","pred":"auxpass","subj":"T2032","obj":"T2034"},{"id":"R1654","pred":"advmod","subj":"T2033","obj":"T2034"},{"id":"R1656","pred":"prep","subj":"T2035","obj":"T2034"},{"id":"R1657","pred":"pobj","subj":"T2036","obj":"T2035"},{"id":"R1658","pred":"punct","subj":"T2037","obj":"T2036"},{"id":"R1660","pred":"appos","subj":"T2038","obj":"T2036"},{"id":"R1661","pred":"punct","subj":"T2039","obj":"T2036"},{"id":"R1662","pred":"punct","subj":"T2040","obj":"T2034"},{"id":"R1664","pred":"det","subj":"T2041","obj":"T2042"},{"id":"R1665","pred":"nsubj","subj":"T2042","obj":"T2043"},{"id":"R1666","pred":"ROOT","subj":"T2043","obj":"T2043"},{"id":"R1668","pred":"det","subj":"T2044","obj":"T2046"},{"id":"R1669","pred":"amod","subj":"T2045","obj":"T2046"},{"id":"R1671","pred":"dobj","subj":"T2046","obj":"T2043"}],"text":" (12), and the impaired expression of IRF-4 in CML was predominately found in T-cells (3). These data suggest a crucial role "}
bionlp-st-ge-2016-reference-tees
{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T2608","span":{"begin":38,"end":43},"obj":"Protein"},{"id":"T2610","span":{"begin":24,"end":34},"obj":"Gene_expression"}],"relations":[{"id":"R2072","pred":"themeOf","subj":"T2608","obj":"T2610"}],"text":" (12), and the impaired expression of IRF-4 in CML was predominately found in T-cells (3). These data suggest a crucial role "}
bionlp-st-ge-2016-reference
{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T1029","span":{"begin":24,"end":34},"obj":"Gene_expression"},{"id":"T1030","span":{"begin":38,"end":43},"obj":"Protein"}],"relations":[{"id":"R763","pred":"themeOf","subj":"T1030","obj":"T1029"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":" (12), and the impaired expression of IRF-4 in CML was predominately found in T-cells (3). These data suggest a crucial role "}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T1698","span":{"begin":38,"end":43},"obj":"Q15306"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":" (12), and the impaired expression of IRF-4 in CML was predominately found in T-cells (3). These data suggest a crucial role "}
test2
{"project":"test2","denotations":[{"id":"T977","span":{"begin":15,"end":23},"obj":"Negative_regulation"},{"id":"T978","span":{"begin":24,"end":34},"obj":"Gene_expression"},{"id":"T979","span":{"begin":38,"end":43},"obj":"Protein"}],"relations":[{"id":"R736","pred":"themeOf","subj":"T978","obj":"T977"},{"id":"R737","pred":"themeOf","subj":"T979","obj":"T978"}],"text":" (12), and the impaired expression of IRF-4 in CML was predominately found in T-cells (3). These data suggest a crucial role "}