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PMC:1310901 / 2800-2960 JSONTXT

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bionlp-st-ge-2016-reference-eval

Id Subject Object Predicate Lexical cue
T2670 151-154 Protein denotes Pip
T2671 155-159 Protein denotes MUM1
T2698 138-143 Protein denotes IRF-4
T2699 145-150 Protein denotes ICSAT
R2087 T2670 T2698 equivalentTo Pip,IRF-4
R2088 T2671 T2698 equivalentTo MUM1,IRF-4
R2120 T2699 T2698 equivalentTo ICSAT,IRF-4

events-check-again

Id Subject Object Predicate Lexical cue
T2527 138-143 Protein denotes IRF-4
T2528 145-150 Protein denotes ICSAT
T2529 151-154 Protein denotes Pip
T2530 155-159 Protein denotes MUM1
R2033 T2528 T2527 equivalentTo ICSAT,IRF-4
R2034 T2529 T2527 equivalentTo Pip,IRF-4
R2035 T2530 T2527 equivalentTo MUM1,IRF-4

2_test

Id Subject Object Predicate Lexical cue
16396836-9620643-76538167 132-133 9620643 denotes 4
16396836-10936058-76538167 132-133 10936058 denotes 4
16396836-11244049-76538167 132-133 11244049 denotes 4

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1276 4-8 NN denotes role
T1277 9-11 IN denotes in
T1278 12-15 DT denotes the
T1279 16-26 NN denotes regulation
T1280 27-29 IN denotes of
T1281 30-37 JJ denotes various
T1282 38-43 NN denotes genes
T1283 44-45 -LRB- denotes (
T1284 45-49 JJ denotes such
T1285 50-52 IN denotes as
T1286 53-57 NN denotes IFNs
T1287 57-58 -COMMA- denotes ,
T1288 59-71 NN denotes interleukins
T1289 71-72 -COMMA- denotes ,
T1290 73-76 NN denotes MHC
T1291 77-82 NN denotes class
T1292 83-87 NN denotes I/II
T1293 87-88 -RRB- denotes )
T1294 88-89 -COMMA- denotes ,
T1295 90-99 NN denotes apoptosis
T1296 100-103 CC denotes and
T1297 104-130 NN denotes differentiation/maturation
T1298 131-132 -LRB- denotes (
T1299 132-135 CD denotes 4–6
T1300 135-136 -RRB- denotes )
T1301 138-143 NN denotes IRF-4
T1302 144-145 -LRB- denotes (
R944 T1279 T1280 arg1Of regulation,of
R945 T1279 T1294 arg1Of regulation,","
R946 T1282 T1280 arg2Of genes,of
R947 T1282 T1281 arg1Of genes,various
R948 T1282 T1283 arg1Of genes,(
R949 T1282 T1285 arg1Of genes,as
R950 T1285 T1284 arg1Of as,such
R951 T1286 T1287 arg1Of IFNs,","
R952 T1287 T1289 arg1Of ",",","
R953 T1288 T1287 arg2Of interleukins,","
R954 T1289 T1285 arg2Of ",",as
R955 T1292 T1289 arg2Of I/II,","
R956 T1292 T1290 arg1Of I/II,MHC
R957 T1292 T1291 arg1Of I/II,class
R958 T1292 T1293 arg1Of I/II,)
R959 T1294 T1277 arg2Of ",",in
R960 T1294 T1278 arg1Of ",",the
R961 T1295 T1296 arg1Of apoptosis,and
R962 T1296 T1294 arg2Of and,","
R963 T1296 T1298 arg1Of and,(
R964 T1297 T1296 arg2Of differentiation/maturation,and
R965 T1299 T1298 arg2Of 4–6,(
R966 T1300 T1298 arg3Of ),(
R967 T1301 T1302 arg1Of IRF-4,(

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T1904 4-8 NN denotes role
T1905 9-11 IN denotes in
T1906 12-15 DT denotes the
T1907 16-26 NN denotes regulation
T1908 27-29 IN denotes of
T1909 30-37 JJ denotes various
T1910 38-43 NNS denotes genes
T1911 44-45 -LRB- denotes (
T1912 45-49 JJ denotes such
T1913 50-52 IN denotes as
T1914 53-57 NNS denotes IFNs
T1915 57-58 , denotes ,
T1916 59-71 NNS denotes interleukins
T1917 71-72 , denotes ,
T1918 73-76 NNP denotes MHC
T1919 77-82 NN denotes class
T1920 83-87 NNP denotes I/II
T1921 87-88 -RRB- denotes )
T1922 88-89 , denotes ,
T1923 90-99 NN denotes apoptosis
T1924 100-103 CC denotes and
T1925 104-130 NN denotes differentiation/maturation
T1926 131-132 -LRB- denotes (
T1927 132-133 CD denotes 4
T1928 134-135 CD denotes 6
T1929 135-136 -RRB- denotes )
T1930 136-137 . denotes .
T1931 138-143 NN denotes IRF-4
T1932 144-145 -LRB- denotes (
T1933 145-159 JJ denotes ICSAT/Pip/MUM1
T1934 159-160 NN denotes /
R1529 T1906 T1907 det the,regulation
R1530 T1907 T1905 pobj regulation,in
R1531 T1908 T1907 prep of,regulation
R1532 T1909 T1910 amod various,genes
R1533 T1910 T1908 pobj genes,of
R1534 T1911 T1910 punct (,genes
R1535 T1912 T1913 amod such,as
R1536 T1913 T1910 prep as,genes
R1537 T1914 T1913 pobj IFNs,as
R1538 T1915 T1914 punct ",",IFNs
R1539 T1916 T1914 conj interleukins,IFNs
R1540 T1917 T1916 punct ",",interleukins
R1542 T1918 T1919 amod MHC,class
R1545 T1919 T1920 compound class,I/II
R1549 T1920 T1907 appos I/II,regulation
R1552 T1921 T1907 punct ),regulation
R1559 T1922 T1907 punct ",",regulation
R1563 T1924 T1923 cc and,apoptosis
R1567 T1925 T1923 conj differentiation/maturation,apoptosis
R1571 T1926 T1925 punct (,differentiation/maturation
R1574 T1927 T1925 nummod 4,differentiation/maturation
R1577 T1928 T1925 appos 6,differentiation/maturation
R1581 T1929 T1925 punct ),differentiation/maturation
R1596 T1933 T1934 amod ICSAT/Pip/MUM1,/

GO-BP

Id Subject Object Predicate Lexical cue
T1080 16-26 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation
T1082 90-99 http://purl.obolibrary.org/obo/GO_0006915 denotes apoptosis
T1084 90-99 http://purl.obolibrary.org/obo/GO_0097194 denotes apoptosis

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T2584 53-57 Protein denotes IFNs
T2585 59-71 Protein denotes interleukins
T2586 73-87 Protein denotes MHC class I/II
T2587 16-26 Regulation denotes regulation
T2588 16-26 Regulation denotes regulation
T2589 16-26 Regulation denotes regulation
T2590 138-143 Protein denotes IRF-4
T2591 145-150 Protein denotes ICSAT
T2592 151-154 Protein denotes Pip
T2593 155-159 Protein denotes MUM1
R2066 T2584 T2587 themeOf IFNs,regulation
R2067 T2585 T2588 themeOf interleukins,regulation
R2068 T2586 T2589 themeOf MHC class I/II,regulation

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T1016 138-143 Protein denotes IRF-4
T1017 145-150 Protein denotes ICSAT
T1018 151-154 Protein denotes Pip
T1019 155-159 Protein denotes MUM1
R755 T1017 T1016 equivalentTo ICSAT,IRF-4
R756 T1018 T1016 equivalentTo Pip,IRF-4
R757 T1019 T1016 equivalentTo MUM1,IRF-4

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T1689 138-143 Q15306 denotes IRF-4
T1690 145-150 Q99419 denotes ICSAT
T1691 151-154 P12273 denotes Pip
T1692 155-159 Q15306 denotes MUM1
T1693 155-159 Q2TAK8 denotes MUM1

test2

Id Subject Object Predicate Lexical cue
T964 138-143 Protein denotes IRF-4
T965 145-150 Protein denotes ICSAT
T966 151-154 Protein denotes Pip
T967 155-159 Protein denotes MUM1
R728 T965 T964 equivalentTo ICSAT,IRF-4
R729 T966 T964 equivalentTo Pip,IRF-4
R730 T967 T964 equivalentTo MUM1,IRF-4