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PMC:1310901 / 27977-28193 JSONTXT

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bionlp-st-ge-2016-reference-eval

Id Subject Object Predicate Lexical cue
T14502 65-74 Regulation denotes regulates
T14503 81-91 Gene_expression denotes expression
T14504 111-121 Gene_expression denotes expression
T14506 169-180 Positive_regulation denotes consequence
T14566 38-43 Protein denotes IRF-4
T14568 75-80 Protein denotes IRF-4
T14569 125-130 Protein denotes IRF-4
T14570 184-189 Protein denotes IRF-4
R11941 T14503 T14502 themeOf expression,regulates
R11943 T14504 T14506 themeOf expression,consequence
R11984 T14568 T14503 themeOf IRF-4,expression
R11986 T14569 T14504 themeOf IRF-4,expression

events-check-again

Id Subject Object Predicate Lexical cue Speculation
T14304 38-43 Protein denotes IRF-4
T14305 65-74 Regulation denotes regulates true
T14306 75-80 Protein denotes IRF-4
T14307 81-91 Gene_expression denotes expression
T14308 111-121 Gene_expression denotes expression
T14309 125-130 Protein denotes IRF-4
T14310 169-180 Positive_regulation denotes consequence true
T14311 184-189 Protein denotes IRF-4
R11851 T14306 T14307 themeOf IRF-4,expression
R11855 T14307 T14305 themeOf expression,regulates
R11859 T14308 T14310 themeOf expression,consequence
R11861 T14309 T14308 themeOf IRF-4,expression

sentences

Id Subject Object Predicate Lexical cue
T11314 0-216 Sentence denotes Taken together, our data suggest that IRF-4 promoter methylation regulates IRF-4 expression, and that aberrant expression of IRF-4 in certain types of leukemia may be a consequence of IRF-4 promoter hypermethylation.
T190 0-216 Sentence denotes Taken together, our data suggest that IRF-4 promoter methylation regulates IRF-4 expression, and that aberrant expression of IRF-4 in certain types of leukemia may be a consequence of IRF-4 promoter hypermethylation.

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T12409 0-5 VB denotes Taken
T12410 6-14 RB denotes together
T12411 14-15 -COMMA- denotes ,
T12412 16-19 PRP-DOLLAR- denotes our
T12413 20-24 NN denotes data
T12414 25-32 VB denotes suggest
T12415 33-37 IN denotes that
T12416 38-43 NN denotes IRF-4
T12417 44-52 NN denotes promoter
T12418 53-64 NN denotes methylation
T12419 65-74 VB denotes regulates
T12420 75-80 NN denotes IRF-4
T12421 81-91 NN denotes expression
T12422 91-92 -COMMA- denotes ,
T12423 93-96 CC denotes and
T12424 97-101 IN denotes that
T12425 102-110 JJ denotes aberrant
T12426 111-121 NN denotes expression
T12427 122-124 IN denotes of
T12428 125-130 NN denotes IRF-4
T12429 131-133 IN denotes in
T12430 134-141 JJ denotes certain
T12431 142-147 NN denotes types
T12432 148-150 IN denotes of
T12433 151-159 NN denotes leukemia
T12434 160-163 MD denotes may
T12435 164-166 VB denotes be
T12436 167-168 DT denotes a
T12437 169-180 NN denotes consequence
T12438 181-183 IN denotes of
T12439 184-189 NN denotes IRF-4
T12440 190-198 NN denotes promoter
T12441 199-215 NN denotes hypermethylation
R10318 T12409 T12410 arg1Of Taken,together
R10319 T12413 T12412 arg1Of data,our
R10320 T12413 T12414 arg1Of data,suggest
R10321 T12414 T12409 modOf suggest,Taken
R10322 T12414 T12411 arg1Of suggest,","
R10323 T12418 T12416 arg1Of methylation,IRF-4
R10324 T12418 T12417 arg1Of methylation,promoter
R10325 T12418 T12419 arg1Of methylation,regulates
R10326 T12419 T12415 arg1Of regulates,that
R10327 T12419 T12423 arg1Of regulates,and
R10328 T12421 T12419 arg2Of expression,regulates
R10329 T12421 T12420 arg1Of expression,IRF-4
R10330 T12423 T12414 arg2Of and,suggest
R10331 T12423 T12422 arg1Of and,","
R10332 T12424 T12423 arg2Of that,and
R10333 T12426 T12425 arg1Of expression,aberrant
R10334 T12426 T12427 arg1Of expression,of
R10335 T12426 T12429 arg1Of expression,in
R10336 T12426 T12434 arg1Of expression,may
R10337 T12426 T12435 arg1Of expression,be
R10338 T12428 T12427 arg2Of IRF-4,of
R10339 T12431 T12429 arg2Of types,in
R10340 T12431 T12430 arg1Of types,certain
R10341 T12431 T12432 arg1Of types,of
R10342 T12433 T12432 arg2Of leukemia,of
R10343 T12435 T12424 arg2Of be,that
R10344 T12435 T12434 arg2Of be,may
R10345 T12437 T12435 arg2Of consequence,be
R10346 T12437 T12436 arg1Of consequence,a
R10347 T12437 T12438 arg1Of consequence,of
R10348 T12441 T12438 arg2Of hypermethylation,of
R10349 T12441 T12439 arg1Of hypermethylation,IRF-4
R10350 T12441 T12440 arg1Of hypermethylation,promoter

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T13652 0-5 VBN denotes Taken
T13653 6-14 RB denotes together
T13654 14-15 , denotes ,
T13655 16-19 PRP$ denotes our
T13656 20-24 NNS denotes data
T13657 25-32 VBP denotes suggest
T13658 33-37 IN denotes that
T13659 38-43 JJ denotes IRF-4
T13660 44-52 NN denotes promoter
T13661 53-64 NN denotes methylation
T13662 65-74 VBZ denotes regulates
T13663 75-80 JJ denotes IRF-4
T13664 81-91 NN denotes expression
T13665 91-92 , denotes ,
T13666 93-96 CC denotes and
T13667 97-101 IN denotes that
T13668 102-110 JJ denotes aberrant
T13669 111-121 NN denotes expression
T13670 122-124 IN denotes of
T13671 125-130 NN denotes IRF-4
T13672 131-133 IN denotes in
T13673 134-141 JJ denotes certain
T13674 142-147 NNS denotes types
T13675 148-150 IN denotes of
T13676 151-159 NN denotes leukemia
T13677 160-163 MD denotes may
T13678 164-166 VB denotes be
T13679 167-168 DT denotes a
T13680 169-180 NN denotes consequence
T13681 181-183 IN denotes of
T13682 184-189 NN denotes IRF-4
T13683 190-198 NN denotes promoter
T13684 199-215 NN denotes hypermethylation
T13685 215-216 . denotes .
R11440 T13653 T13652 advmod together,Taken
R11446 T13654 T13657 punct ",",suggest
R11450 T13655 T13656 poss our,data
R11452 T13656 T13657 nsubj data,suggest
R11453 T13657 T13657 ROOT suggest,suggest
R11455 T13658 T13662 mark that,regulates
R11458 T13659 T13661 amod IRF-4,methylation
R11459 T13660 T13661 compound promoter,methylation
R11461 T13661 T13662 nsubj methylation,regulates
R11465 T13662 T13657 ccomp regulates,suggest
R11471 T13663 T13664 amod IRF-4,expression
R11475 T13664 T13662 dobj expression,regulates
R11479 T13665 T13662 punct ",",regulates
R11482 T13666 T13662 cc and,regulates
R11487 T13667 T13678 mark that,be
R11489 T13652 T13657 advcl Taken,suggest
R11490 T13668 T13669 amod aberrant,expression
R11491 T13684 T13681 pobj hypermethylation,of
R11492 T13669 T13678 nsubj expression,be
R11493 T13685 T13657 punct .,suggest
R11494 T13670 T13669 prep of,expression
R11495 T13671 T13670 pobj IRF-4,of
R11496 T13672 T13669 prep in,expression
R11497 T13673 T13674 amod certain,types
R11498 T13674 T13672 pobj types,in
R11499 T13675 T13674 prep of,types
R11500 T13676 T13675 pobj leukemia,of
R11501 T13677 T13678 aux may,be
R11502 T13678 T13662 conj be,regulates
R11503 T13679 T13680 det a,consequence
R11504 T13680 T13678 attr consequence,be
R11505 T13681 T13680 prep of,consequence
R11506 T13682 T13684 compound IRF-4,hypermethylation
R11507 T13683 T13684 compound promoter,hypermethylation

GO-BP

Id Subject Object Predicate Lexical cue
T11329 53-64 http://purl.obolibrary.org/obo/GO_0032259 denotes methylation

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T14431 38-52 Protein denotes IRF-4 promoter
T14432 75-80 Protein denotes IRF-4
T14433 125-130 Protein denotes IRF-4
T14434 184-198 Protein denotes IRF-4 promoter
T14435 81-91 Gene_expression denotes expression
T14436 111-121 Gene_expression denotes expression
T14437 169-180 Positive_regulation denotes consequence
T14438 65-74 Regulation denotes regulates
R11925 T14432 T14435 themeOf IRF-4,expression
R11927 T14433 T14436 themeOf IRF-4,expression
R11928 T14435 T14438 themeOf expression,regulates
R11931 T14436 T14437 themeOf expression,consequence

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue Speculation
T11270 38-43 Protein denotes IRF-4
T11271 65-74 Regulation denotes regulates true
T11272 75-80 Protein denotes IRF-4
T11273 81-91 Gene_expression denotes expression
T11274 111-121 Gene_expression denotes expression
T11275 125-130 Protein denotes IRF-4
T11276 169-180 Positive_regulation denotes consequence true
T11277 184-189 Protein denotes IRF-4
R9220 T11272 T11273 themeOf IRF-4,expression
R9221 T11273 T11271 themeOf expression,regulates
R9222 T11274 T11276 themeOf expression,consequence
R9223 T11275 T11274 themeOf IRF-4,expression

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T12527 38-43 Q15306 denotes IRF-4
T12528 75-80 Q15306 denotes IRF-4
T12529 125-130 Q15306 denotes IRF-4
T12530 184-189 Q15306 denotes IRF-4

test2

Id Subject Object Predicate Lexical cue
T11128 38-43 Protein denotes IRF-4
T11129 65-74 Regulation denotes regulates
T11130 75-80 Protein denotes IRF-4
T11131 81-91 Gene_expression denotes expression
T11132 111-121 Gene_expression denotes expression
T11133 125-130 Protein denotes IRF-4
T11134 184-189 Protein denotes IRF-4
R9135 T11130 T11131 themeOf IRF-4,expression
R9136 T11131 T11129 themeOf expression,regulates
R9137 T11133 T11132 themeOf IRF-4,expression