PMC:1310901 / 23845-23973 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/1310901","sourcedb":"PMC","sourceid":"1310901","source_url":"http://www.ncbi.nlm.nih.gov/pmc/1310901","text":"We found that IRF-4 expression could indeed be connected to the methylation status of distinct CpG motifs in the IRF-4 promoter.","tracks":[{"project":"bionlp-st-ge-2016-reference-eval","denotations":[{"id":"T14456","span":{"begin":20,"end":30},"obj":"Gene_expression"},{"id":"T14519","span":{"begin":14,"end":19},"obj":"Protein"},{"id":"T14520","span":{"begin":113,"end":118},"obj":"Protein"}],"relations":[{"id":"R11940","pred":"themeOf","subj":"T14519","obj":"T14456"}],"attributes":[{"subj":"T14456","pred":"source","obj":"bionlp-st-ge-2016-reference-eval"},{"subj":"T14519","pred":"source","obj":"bionlp-st-ge-2016-reference-eval"},{"subj":"T14520","pred":"source","obj":"bionlp-st-ge-2016-reference-eval"}]},{"project":"events-check-again","denotations":[{"id":"T14215","span":{"begin":14,"end":19},"obj":"Protein"},{"id":"T14216","span":{"begin":20,"end":30},"obj":"Gene_expression"},{"id":"T14217","span":{"begin":113,"end":118},"obj":"Protein"}],"relations":[{"id":"R11795","pred":"themeOf","subj":"T14215","obj":"T14216"}],"attributes":[{"subj":"T14215","pred":"source","obj":"events-check-again"},{"subj":"T14216","pred":"source","obj":"events-check-again"},{"subj":"T14217","pred":"source","obj":"events-check-again"}]},{"project":"sentences","denotations":[{"id":"T11289","span":{"begin":0,"end":128},"obj":"Sentence"},{"id":"T165","span":{"begin":0,"end":128},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T11289","pred":"source","obj":"sentences"},{"subj":"T165","pred":"source","obj":"sentences"}]},{"project":"pmc-enju-pas","denotations":[{"id":"T11693","span":{"begin":0,"end":2},"obj":"PRP"},{"id":"T11694","span":{"begin":3,"end":8},"obj":"VB"},{"id":"T11695","span":{"begin":9,"end":13},"obj":"IN"},{"id":"T11696","span":{"begin":14,"end":19},"obj":"NN"},{"id":"T11697","span":{"begin":20,"end":30},"obj":"NN"},{"id":"T11698","span":{"begin":31,"end":36},"obj":"MD"},{"id":"T11699","span":{"begin":37,"end":43},"obj":"RB"},{"id":"T11700","span":{"begin":44,"end":46},"obj":"VB"},{"id":"T11701","span":{"begin":47,"end":56},"obj":"VB"},{"id":"T11702","span":{"begin":57,"end":59},"obj":"TO"},{"id":"T11703","span":{"begin":60,"end":63},"obj":"DT"},{"id":"T11704","span":{"begin":64,"end":75},"obj":"NN"},{"id":"T11705","span":{"begin":76,"end":82},"obj":"NN"},{"id":"T11706","span":{"begin":83,"end":85},"obj":"IN"},{"id":"T11707","span":{"begin":86,"end":94},"obj":"JJ"},{"id":"T11708","span":{"begin":95,"end":98},"obj":"NN"},{"id":"T11709","span":{"begin":99,"end":105},"obj":"NN"},{"id":"T11710","span":{"begin":106,"end":108},"obj":"IN"},{"id":"T11711","span":{"begin":109,"end":112},"obj":"DT"},{"id":"T11712","span":{"begin":113,"end":118},"obj":"NN"},{"id":"T11713","span":{"begin":119,"end":127},"obj":"NN"}],"relations":[{"id":"R9587","pred":"arg1Of","subj":"T11693","obj":"T11694"},{"id":"R9588","pred":"arg1Of","subj":"T11697","obj":"T11696"},{"id":"R9589","pred":"arg1Of","subj":"T11697","obj":"T11698"},{"id":"R9590","pred":"arg1Of","subj":"T11697","obj":"T11700"},{"id":"R9591","pred":"arg2Of","subj":"T11697","obj":"T11701"},{"id":"R9592","pred":"arg2Of","subj":"T11701","obj":"T11694"},{"id":"R9593","pred":"arg1Of","subj":"T11701","obj":"T11695"},{"id":"R9594","pred":"arg2Of","subj":"T11701","obj":"T11698"},{"id":"R9595","pred":"arg1Of","subj":"T11701","obj":"T11699"},{"id":"R9596","pred":"arg2Of","subj":"T11701","obj":"T11700"},{"id":"R9597","pred":"arg1Of","subj":"T11701","obj":"T11702"},{"id":"R9598","pred":"arg2Of","subj":"T11705","obj":"T11702"},{"id":"R9599","pred":"arg1Of","subj":"T11705","obj":"T11703"},{"id":"R9600","pred":"arg1Of","subj":"T11705","obj":"T11704"},{"id":"R9601","pred":"arg1Of","subj":"T11705","obj":"T11706"},{"id":"R9602","pred":"arg2Of","subj":"T11709","obj":"T11706"},{"id":"R9603","pred":"arg1Of","subj":"T11709","obj":"T11707"},{"id":"R9604","pred":"arg1Of","subj":"T11709","obj":"T11708"},{"id":"R9605","pred":"arg1Of","subj":"T11709","obj":"T11710"},{"id":"R9606","pred":"arg2Of","subj":"T11713","obj":"T11710"},{"id":"R9607","pred":"arg1Of","subj":"T11713","obj":"T11711"},{"id":"R9608","pred":"arg1Of","subj":"T11713","obj":"T11712"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"attributes":[{"subj":"T11693","pred":"source","obj":"pmc-enju-pas"},{"subj":"T11694","pred":"source","obj":"pmc-enju-pas"},{"subj":"T11695","pred":"source","obj":"pmc-enju-pas"},{"subj":"T11696","pred":"source","obj":"pmc-enju-pas"},{"subj":"T11697","pred":"source","obj":"pmc-enju-pas"},{"subj":"T11698","pred":"source","obj":"pmc-enju-pas"},{"subj":"T11699","pred":"source","obj":"pmc-enju-pas"},{"subj":"T11700","pred":"source","obj":"pmc-enju-pas"},{"subj":"T11701","pred":"source","obj":"pmc-enju-pas"},{"subj":"T11702","pred":"source","obj":"pmc-enju-pas"},{"subj":"T11703","pred":"source","obj":"pmc-enju-pas"},{"subj":"T11704","pred":"source","obj":"pmc-enju-pas"},{"subj":"T11705","pred":"source","obj":"pmc-enju-pas"},{"subj":"T11706","pred":"source","obj":"pmc-enju-pas"},{"subj":"T11707","pred":"source","obj":"pmc-enju-pas"},{"subj":"T11708","pred":"source","obj":"pmc-enju-pas"},{"subj":"T11709","pred":"source","obj":"pmc-enju-pas"},{"subj":"T11710","pred":"source","obj":"pmc-enju-pas"},{"subj":"T11711","pred":"source","obj":"pmc-enju-pas"},{"subj":"T11712","pred":"source","obj":"pmc-enju-pas"},{"subj":"T11713","pred":"source","obj":"pmc-enju-pas"}]},{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T12900","span":{"begin":0,"end":2},"obj":"PRP"},{"id":"T12901","span":{"begin":3,"end":8},"obj":"VBD"},{"id":"T12902","span":{"begin":9,"end":13},"obj":"IN"},{"id":"T12903","span":{"begin":14,"end":19},"obj":"JJ"},{"id":"T12904","span":{"begin":20,"end":30},"obj":"NN"},{"id":"T12905","span":{"begin":31,"end":36},"obj":"MD"},{"id":"T12906","span":{"begin":37,"end":43},"obj":"RB"},{"id":"T12907","span":{"begin":44,"end":46},"obj":"VB"},{"id":"T12908","span":{"begin":47,"end":56},"obj":"VBN"},{"id":"T12909","span":{"begin":57,"end":59},"obj":"TO"},{"id":"T12910","span":{"begin":60,"end":63},"obj":"DT"},{"id":"T12911","span":{"begin":64,"end":75},"obj":"NN"},{"id":"T12912","span":{"begin":76,"end":82},"obj":"NN"},{"id":"T12913","span":{"begin":83,"end":85},"obj":"IN"},{"id":"T12914","span":{"begin":86,"end":94},"obj":"JJ"},{"id":"T12915","span":{"begin":95,"end":98},"obj":"NNP"},{"id":"T12916","span":{"begin":99,"end":105},"obj":"NNS"},{"id":"T12917","span":{"begin":106,"end":108},"obj":"IN"},{"id":"T12918","span":{"begin":109,"end":112},"obj":"DT"},{"id":"T12919","span":{"begin":113,"end":118},"obj":"NN"},{"id":"T12920","span":{"begin":119,"end":127},"obj":"NN"},{"id":"T12921","span":{"begin":127,"end":128},"obj":"."}],"relations":[{"id":"R10722","pred":"nsubj","subj":"T12900","obj":"T12901"},{"id":"R10723","pred":"ROOT","subj":"T12901","obj":"T12901"},{"id":"R10724","pred":"mark","subj":"T12902","obj":"T12908"},{"id":"R10725","pred":"amod","subj":"T12903","obj":"T12904"},{"id":"R10726","pred":"nsubjpass","subj":"T12904","obj":"T12908"},{"id":"R10727","pred":"aux","subj":"T12905","obj":"T12908"},{"id":"R10728","pred":"advmod","subj":"T12906","obj":"T12908"},{"id":"R10729","pred":"auxpass","subj":"T12907","obj":"T12908"},{"id":"R10730","pred":"ccomp","subj":"T12908","obj":"T12901"},{"id":"R10731","pred":"prep","subj":"T12909","obj":"T12908"},{"id":"R10732","pred":"det","subj":"T12910","obj":"T12912"},{"id":"R10733","pred":"amod","subj":"T12911","obj":"T12912"},{"id":"R10734","pred":"pobj","subj":"T12912","obj":"T12909"},{"id":"R10735","pred":"prep","subj":"T12913","obj":"T12912"},{"id":"R10736","pred":"amod","subj":"T12914","obj":"T12916"},{"id":"R10737","pred":"compound","subj":"T12915","obj":"T12916"},{"id":"R10738","pred":"pobj","subj":"T12916","obj":"T12913"},{"id":"R10739","pred":"prep","subj":"T12917","obj":"T12912"},{"id":"R10740","pred":"det","subj":"T12918","obj":"T12920"},{"id":"R10741","pred":"compound","subj":"T12919","obj":"T12920"},{"id":"R10742","pred":"pobj","subj":"T12920","obj":"T12917"},{"id":"R10743","pred":"punct","subj":"T12921","obj":"T12901"}],"attributes":[{"subj":"T12900","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T12901","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T12902","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T12903","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T12904","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T12905","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T12906","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T12907","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T12908","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T12909","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T12910","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T12911","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T12912","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T12913","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T12914","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T12915","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T12916","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T12917","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T12918","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T12919","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T12920","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T12921","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"}]},{"project":"GO-BP","denotations":[{"id":"T11319","span":{"begin":64,"end":75},"obj":"http://purl.obolibrary.org/obo/GO_0032259"}],"attributes":[{"subj":"T11319","pred":"source","obj":"GO-BP"}]},{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T14339","span":{"begin":14,"end":19},"obj":"Protein"},{"id":"T14340","span":{"begin":95,"end":105},"obj":"Protein"},{"id":"T14341","span":{"begin":113,"end":127},"obj":"Protein"},{"id":"T14342","span":{"begin":20,"end":30},"obj":"Gene_expression"}],"relations":[{"id":"R11870","pred":"themeOf","subj":"T14339","obj":"T14342"}],"attributes":[{"subj":"T14339","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T14340","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T14341","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T14342","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"}]},{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T11181","span":{"begin":14,"end":19},"obj":"Protein"},{"id":"T11182","span":{"begin":20,"end":30},"obj":"Gene_expression"},{"id":"T11183","span":{"begin":113,"end":118},"obj":"Protein"}],"relations":[{"id":"R9167","pred":"themeOf","subj":"T11181","obj":"T11182"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"attributes":[{"subj":"T11181","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T11182","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T11183","pred":"source","obj":"bionlp-st-ge-2016-reference"}]},{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T12461","span":{"begin":14,"end":19},"obj":"Q15306"},{"id":"T12462","span":{"begin":113,"end":118},"obj":"Q15306"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"attributes":[{"subj":"T12461","pred":"source","obj":"bionlp-st-ge-2016-uniprot"},{"subj":"T12462","pred":"source","obj":"bionlp-st-ge-2016-uniprot"}]},{"project":"test2","denotations":[{"id":"T11049","span":{"begin":14,"end":19},"obj":"Protein"},{"id":"T11050","span":{"begin":20,"end":30},"obj":"Gene_expression"},{"id":"T11051","span":{"begin":113,"end":118},"obj":"Protein"}],"relations":[{"id":"R9098","pred":"themeOf","subj":"T11049","obj":"T11050"}],"attributes":[{"subj":"T11049","pred":"source","obj":"test2"},{"subj":"T11050","pred":"source","obj":"test2"},{"subj":"T11051","pred":"source","obj":"test2"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"bionlp-st-ge-2016-reference-eval","color":"#a0ec93","default":true},{"id":"events-check-again","color":"#ec93ba"},{"id":"sentences","color":"#93d4ec"},{"id":"pmc-enju-pas","color":"#ecea93"},{"id":"bionlp-st-ge-2016-spacy-parsed","color":"#d093ec"},{"id":"GO-BP","color":"#93ecb6"},{"id":"bionlp-st-ge-2016-reference-tees","color":"#ec9c93"},{"id":"bionlp-st-ge-2016-reference","color":"#93a3ec"},{"id":"bionlp-st-ge-2016-uniprot","color":"#beec93"},{"id":"test2","color":"#ec93d8"}]}]}}