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PMC:1310901 / 2167-2317 JSONTXT

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bionlp-st-ge-2016-reference-eval

Id Subject Object Predicate Lexical cue
T2650 5-12 Positive_regulation denotes leading
T2661 16-26 Gene_expression denotes expression
T2669 32-51 Protein denotes bcr-abl fusion gene
T2680 111-123 Protein denotes interferon α
T2691 125-130 Protein denotes IFN-α
R2079 T2661 T2650 themeOf expression,leading
R2085 T2669 T2661 themeOf bcr-abl fusion gene,expression
R2110 T2691 T2680 equivalentTo IFN-α,interferon α

events-check-again

Id Subject Object Predicate Lexical cue
T2515 5-12 Positive_regulation denotes leading
T2516 16-26 Gene_expression denotes expression
T2517 32-51 Protein denotes bcr-abl fusion gene
T2518 111-123 Protein denotes interferon α
T2519 125-130 Protein denotes IFN-α
R2017 T2516 T2515 themeOf expression,leading
R2021 T2517 T2516 themeOf bcr-abl fusion gene,expression
R2024 T2519 T2518 equivalentTo IFN-α,interferon α

2_test

Id Subject Object Predicate Lexical cue
16396836-10219069-76538163 92-93 10219069 denotes 2

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1163 0-1 -COLON- denotes ;
T1164 1-3 CD denotes 22
T1165 3-4 -RRB- denotes )
T1166 5-12 VB denotes leading
T1167 13-15 TO denotes to
T1168 16-26 NN denotes expression
T1169 27-29 IN denotes of
T1170 30-31 DT denotes a
T1171 32-39 NN denotes bcr-abl
T1172 40-46 NN denotes fusion
T1173 47-51 NN denotes gene
T1174 51-52 -COMMA- denotes ,
T1175 53-55 DT denotes an
T1176 56-64 JJ denotes aberrant
T1177 65-74 VB denotes activated
T1178 75-83 NN denotes tyrosine
T1179 84-90 NN denotes kinase
T1180 91-92 -LRB- denotes (
T1181 92-93 CD denotes 2
T1182 93-94 -RRB- denotes )
T1183 96-105 NN denotes Treatment
T1184 106-110 IN denotes with
T1185 111-121 NN denotes interferon
T1186 122-123 NN denotes α
T1187 124-125 -LRB- denotes (
T1188 125-130 NN denotes IFN-α
T1189 130-131 -RRB- denotes )
T1190 132-140 VB denotes prolongs
T1191 141-149 NN denotes survival
R833 T1164 T1163 arg2Of 22,;
R835 T1166 T1167 arg1Of leading,to
R836 T1168 T1167 arg2Of expression,to
R837 T1168 T1169 arg1Of expression,of
R838 T1173 T1169 arg2Of gene,of
R839 T1173 T1170 arg1Of gene,a
R840 T1173 T1171 arg1Of gene,bcr-abl
R841 T1173 T1172 arg1Of gene,fusion
R842 T1173 T1174 arg1Of gene,","
R843 T1179 T1174 arg2Of kinase,","
R844 T1179 T1175 arg1Of kinase,an
R845 T1179 T1176 arg1Of kinase,aberrant
R846 T1179 T1177 arg2Of kinase,activated
R847 T1179 T1178 arg1Of kinase,tyrosine
R848 T1179 T1180 arg1Of kinase,(
R849 T1181 T1180 arg2Of 2,(
R850 T1182 T1180 arg3Of ),(
R851 T1183 T1184 arg1Of Treatment,with
R852 T1183 T1190 arg1Of Treatment,prolongs
R855 T1186 T1184 arg2Of α,with
R856 T1186 T1185 arg1Of α,interferon
R857 T1186 T1187 arg1Of α,(
R858 T1188 T1187 arg2Of IFN-α,(
R859 T1189 T1187 arg3Of ),(
R861 T1191 T1190 arg2Of survival,prolongs

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T1785 0-1 : denotes ;
T1786 1-3 CD denotes 22
T1787 3-4 -RRB- denotes )
T1788 5-12 VBG denotes leading
T1789 13-15 TO denotes to
T1790 16-26 NN denotes expression
T1791 27-29 IN denotes of
T1792 30-31 DT denotes a
T1793 32-39 JJ denotes bcr-abl
T1794 40-46 NN denotes fusion
T1795 47-51 NN denotes gene
T1796 51-52 , denotes ,
T1797 53-55 DT denotes an
T1798 56-64 JJ denotes aberrant
T1799 65-74 VBN denotes activated
T1800 75-83 NN denotes tyrosine
T1801 84-90 NN denotes kinase
T1802 91-92 -LRB- denotes (
T1803 92-93 LS denotes 2
T1804 93-94 -RRB- denotes )
T1805 94-95 . denotes .
T1806 96-105 NNP denotes Treatment
T1807 106-110 IN denotes with
T1808 111-121 NN denotes interferon
T1809 122-123 NN denotes α
T1810 124-125 -LRB- denotes (
T1811 125-130 NNP denotes IFN-α
T1812 130-131 -RRB- denotes )
T1813 132-140 NNS denotes prolongs
T1814 141-149 NN denotes survival
R1408 T1785 T1786 punct ;,22
R1412 T1789 T1788 prep to,leading
R1413 T1790 T1789 pobj expression,to
R1414 T1791 T1790 prep of,expression
R1415 T1792 T1795 det a,gene
R1416 T1793 T1795 amod bcr-abl,gene
R1417 T1794 T1795 compound fusion,gene
R1418 T1795 T1791 pobj gene,of
R1419 T1796 T1795 punct ",",gene
R1420 T1797 T1801 det an,kinase
R1421 T1798 T1801 amod aberrant,kinase
R1422 T1799 T1801 amod activated,kinase
R1423 T1800 T1801 compound tyrosine,kinase
R1424 T1801 T1795 appos kinase,gene
R1425 T1802 T1803 punct (,2
R1426 T1803 T1801 appos 2,kinase
R1427 T1804 T1803 punct ),2
R1429 T1806 T1813 nsubj Treatment,prolongs
R1430 T1807 T1806 prep with,Treatment
R1431 T1808 T1809 compound interferon,α
R1432 T1809 T1807 pobj α,with
R1433 T1810 T1811 punct (,IFN-α
R1434 T1811 T1809 appos IFN-α,α
R1435 T1812 T1806 punct ),Treatment
R1436 T1813 T1813 ROOT prolongs,prolongs
R1437 T1814 T1813 dobj survival,prolongs

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T2565 32-35 Protein denotes bcr
T2566 36-39 Protein denotes abl
T2567 16-26 Gene_expression denotes expression
T2568 16-26 Gene_expression denotes expression
T2569 5-12 Positive_regulation denotes leading
T2570 5-12 Positive_regulation denotes leading
T2571 111-123 Protein denotes interferon α
T2572 125-130 Protein denotes IFN-α
R2052 T2565 T2567 themeOf bcr,expression
R2053 T2566 T2568 themeOf abl,expression
R2055 T2567 T2569 themeOf expression,leading
R2056 T2568 T2570 themeOf expression,leading

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T1004 5-12 Positive_regulation denotes leading
T1005 16-26 Gene_expression denotes expression
T1006 32-51 Protein denotes bcr-abl fusion gene
T1007 111-123 Protein denotes interferon α
T1008 125-130 Protein denotes IFN-α
R749 T1008 T1007 equivalentTo IFN-α,interferon α
R747 T1005 T1004 themeOf expression,leading
R748 T1006 T1005 themeOf bcr-abl fusion gene,expression

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T1673 32-35 P11274 denotes bcr
T1674 36-39 P00519 denotes abl
T1675 125-130 P01562 denotes IFN-α

test2

Id Subject Object Predicate Lexical cue
T952 5-12 Positive_regulation denotes leading
T953 16-26 Gene_expression denotes expression
T954 32-51 Protein denotes bcr-abl fusion gene
T955 111-123 Protein denotes interferon α
T956 125-130 Protein denotes IFN-α
R720 T953 T952 themeOf expression,leading
R721 T954 T953 themeOf bcr-abl fusion gene,expression
R722 T956 T955 equivalentTo IFN-α,interferon α