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bionlp-st-ge-2016-reference-eval

Id Subject Object Predicate Lexical cue
T10828 183-193 Regulation denotes regulation
T10829 525-533 Gene_expression denotes negative
T10830 602-613 Transcription denotes mRNA levels
T10831 602-613 Transcription denotes mRNA levels
T10832 602-613 Transcription denotes mRNA levels
T10833 602-613 Transcription denotes mRNA levels
T10834 602-613 Transcription denotes mRNA levels
T10835 602-613 Transcription denotes mRNA levels
T10836 602-613 Transcription denotes mRNA levels
T10837 659-669 Transcription denotes expression
T10838 659-669 Transcription denotes expression
T10839 659-669 Transcription denotes expression
T10840 659-669 Transcription denotes expression
T10841 659-669 Transcription denotes expression
T10842 659-669 Transcription denotes expression
T10843 659-669 Transcription denotes expression
T10844 789-797 Gene_expression denotes positive
T10845 803-811 Gene_expression denotes negative
T10846 863-876 Transcription denotes transcription
T10847 863-876 Transcription denotes transcription
T10848 863-876 Transcription denotes transcription
T10849 863-876 Transcription denotes transcription
T10850 863-876 Transcription denotes transcription
T10851 863-876 Transcription denotes transcription
T10852 863-876 Transcription denotes transcription
T10853 511-519 Gene_expression denotes positive
T10854 101-106 Protein denotes IRF-4
T10855 505-510 Protein denotes IRF-4
T10856 695-700 Protein denotes IRF-4
T10857 783-788 Protein denotes IRF-4
T10858 174-182 Entity denotes promoter
T10859 339-344 Protein denotes IRF-4
T10860 420-425 Protein denotes DNMT1
T10861 427-433 Protein denotes DNMT3A
T10862 438-444 Protein denotes DNMT3B
T10863 454-458 Protein denotes MBD1
T10864 460-464 Protein denotes MBD2
T10865 466-470 Protein denotes MBD4
T10866 475-479 Protein denotes MeCP
T10867 486-496 Gene_expression denotes expression
T10868 486-496 Gene_expression denotes expression
T10869 486-496 Gene_expression denotes expression
T10870 486-496 Gene_expression denotes expression
T10871 486-496 Gene_expression denotes expression
T10872 486-496 Gene_expression denotes expression
R8956 T10855 T10853 themeOf IRF-4,positive
R8957 T10855 T10829 themeOf IRF-4,negative
R8958 T10857 T10844 themeOf IRF-4,positive
R8959 T10857 T10845 themeOf IRF-4,negative
R8960 T10858 T10828 themeOf promoter,regulation
R8961 T10858 T10859 partOf promoter,IRF-4
R8962 T10860 T10830 themeOf DNMT1,mRNA levels
R8963 T10860 T10837 themeOf DNMT1,expression
R8964 T10860 T10846 themeOf DNMT1,transcription
R8965 T10860 T10867 themeOf DNMT1,expression
R8966 T10861 T10831 themeOf DNMT3A,mRNA levels
R8967 T10861 T10838 themeOf DNMT3A,expression
R8968 T10861 T10847 themeOf DNMT3A,transcription
R8969 T10861 T10868 themeOf DNMT3A,expression
R8970 T10862 T10832 themeOf DNMT3B,mRNA levels
R8971 T10862 T10839 themeOf DNMT3B,expression
R8972 T10862 T10848 themeOf DNMT3B,transcription
R8973 T10862 T10869 themeOf DNMT3B,expression
R8974 T10863 T10833 themeOf MBD1,mRNA levels
R8975 T10863 T10840 themeOf MBD1,expression
R8976 T10863 T10849 themeOf MBD1,transcription
R8977 T10863 T10870 themeOf MBD1,expression
R8978 T10864 T10834 themeOf MBD2,mRNA levels
R8979 T10864 T10841 themeOf MBD2,expression
R8980 T10864 T10850 themeOf MBD2,transcription
R8981 T10864 T10871 themeOf MBD2,expression
R8982 T10865 T10835 themeOf MBD4,mRNA levels
R8983 T10865 T10842 themeOf MBD4,expression
R8984 T10865 T10851 themeOf MBD4,transcription
R8985 T10866 T10836 themeOf MeCP,mRNA levels
R8986 T10866 T10843 themeOf MeCP,expression
R8987 T10866 T10852 themeOf MeCP,transcription
R8988 T10866 T10872 themeOf MeCP,expression

events-check-again

Id Subject Object Predicate Lexical cue Negation
T10733 101-106 Protein denotes IRF-4
T10734 174-182 Entity denotes promoter
T10735 183-193 Regulation denotes regulation
T10736 339-344 Protein denotes IRF-4
T10737 420-425 Protein denotes DNMT1
T10738 427-433 Protein denotes DNMT3A
T10739 438-444 Protein denotes DNMT3B
T10740 454-458 Protein denotes MBD1
T10741 460-464 Protein denotes MBD2
T10742 466-470 Protein denotes MBD4
T10743 475-479 Protein denotes MeCP
T10744 481-496 Transcription denotes mRNA expression
T10745 481-496 Transcription denotes mRNA expression
T10746 481-496 Transcription denotes mRNA expression
T10747 481-496 Transcription denotes mRNA expression
T10748 481-496 Transcription denotes mRNA expression
T10749 481-496 Transcription denotes mRNA expression
T10750 481-496 Transcription denotes mRNA expression
T10751 505-510 Protein denotes IRF-4
T10752 511-519 Gene_expression denotes positive
T10753 525-533 Gene_expression denotes negative true
T10754 602-613 Transcription denotes mRNA levels
T10755 602-613 Transcription denotes mRNA levels
T10756 602-613 Transcription denotes mRNA levels
T10757 602-613 Transcription denotes mRNA levels
T10758 602-613 Transcription denotes mRNA levels
T10759 602-613 Transcription denotes mRNA levels
T10760 602-613 Transcription denotes mRNA levels
T10761 659-669 Transcription denotes expression
T10762 659-669 Transcription denotes expression
T10763 659-669 Transcription denotes expression
T10764 659-669 Transcription denotes expression
T10765 659-669 Transcription denotes expression
T10766 659-669 Transcription denotes expression
T10767 659-669 Transcription denotes expression
T10768 695-700 Protein denotes IRF-4
T10769 783-788 Protein denotes IRF-4
T10770 789-797 Gene_expression denotes positive
T10771 803-811 Gene_expression denotes negative true
T10772 863-876 Transcription denotes transcription
T10773 863-876 Transcription denotes transcription
T10774 863-876 Transcription denotes transcription
T10775 863-876 Transcription denotes transcription
T10776 863-876 Transcription denotes transcription
T10777 863-876 Transcription denotes transcription
T10778 863-876 Transcription denotes transcription
R8893 T10734 T10735 themeOf promoter,regulation
R8894 T10734 T10736 partOf promoter,IRF-4
R8895 T10737 T10747 themeOf DNMT1,mRNA expression
R8896 T10737 T10760 themeOf DNMT1,mRNA levels
R8897 T10737 T10763 themeOf DNMT1,expression
R8898 T10737 T10775 themeOf DNMT1,transcription
R8899 T10738 T10750 themeOf DNMT3A,mRNA expression
R8900 T10738 T10757 themeOf DNMT3A,mRNA levels
R8901 T10738 T10764 themeOf DNMT3A,expression
R8902 T10738 T10773 themeOf DNMT3A,transcription
R8903 T10739 T10749 themeOf DNMT3B,mRNA expression
R8904 T10739 T10758 themeOf DNMT3B,mRNA levels
R8905 T10739 T10767 themeOf DNMT3B,expression
R8906 T10739 T10774 themeOf DNMT3B,transcription
R8907 T10740 T10748 themeOf MBD1,mRNA expression
R8908 T10740 T10759 themeOf MBD1,mRNA levels
R8909 T10740 T10766 themeOf MBD1,expression
R8910 T10740 T10772 themeOf MBD1,transcription
R8911 T10741 T10745 themeOf MBD2,mRNA expression
R8912 T10741 T10756 themeOf MBD2,mRNA levels
R8913 T10741 T10765 themeOf MBD2,expression
R8914 T10741 T10776 themeOf MBD2,transcription
R8915 T10742 T10744 themeOf MBD4,mRNA expression
R8916 T10742 T10754 themeOf MBD4,mRNA levels
R8917 T10742 T10762 themeOf MBD4,expression
R8918 T10742 T10777 themeOf MBD4,transcription
R8919 T10743 T10746 themeOf MeCP,mRNA expression
R8920 T10743 T10755 themeOf MeCP,mRNA levels
R8921 T10743 T10761 themeOf MeCP,expression
R8922 T10743 T10778 themeOf MeCP,transcription
R8923 T10751 T10752 themeOf IRF-4,positive
R8924 T10751 T10753 themeOf IRF-4,negative
R8925 T10769 T10770 themeOf IRF-4,positive
R8926 T10769 T10771 themeOf IRF-4,negative

GO-CC

Id Subject Object Predicate Lexical cue
T10592 534-539 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T10593 575-580 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T10594 812-817 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T10244 0-127 Sentence denotes mRNA expression of DNA methyltransferases and methyl-CpG-binding proteins may not be associated with IRF-4 promoter methylation
T10245 128-354 Sentence denotes Since abundance of DNMT and MBP contribute to promoter regulation via methylation (25,26,28), we studied their mRNA expression to investigate a possible mechanism for the observed methylation differences in the IRF-4 promoter.
T10246 355-552 Sentence denotes To this end, we did not detect a significant difference in DNMT (DNMT1, DNMT3A and DNMT3B) or MBP (MBD1, MBD2, MBD4 and MeCP) mRNA expression between IRF-4-positive and -negative cells (Figure 5D).
T10247 553-708 Sentence denotes In fact, all analyzed cells had moderate to high mRNA levels of these tested DNMT/MBPs and differences in expression were not correlated with IRF-4 status.
T10248 709-877 Sentence denotes These results indicate a distinct cause of the methylation differences in IRF-4-positive and -negative cells rather than changes in the DNMT and MBP mRNA transcription.
T148 0-127 Sentence denotes mRNA expression of DNA methyltransferases and methyl-CpG-binding proteins may not be associated with IRF-4 promoter methylation
T149 128-354 Sentence denotes Since abundance of DNMT and MBP contribute to promoter regulation via methylation (25,26,28), we studied their mRNA expression to investigate a possible mechanism for the observed methylation differences in the IRF-4 promoter.
T150 355-552 Sentence denotes To this end, we did not detect a significant difference in DNMT (DNMT1, DNMT3A and DNMT3B) or MBP (MBD1, MBD2, MBD4 and MeCP) mRNA expression between IRF-4-positive and -negative cells (Figure 5D).
T151 553-708 Sentence denotes In fact, all analyzed cells had moderate to high mRNA levels of these tested DNMT/MBPs and differences in expression were not correlated with IRF-4 status.
T152 709-877 Sentence denotes These results indicate a distinct cause of the methylation differences in IRF-4-positive and -negative cells rather than changes in the DNMT and MBP mRNA transcription.

2_test

Id Subject Object Predicate Lexical cue
16396836-11222358-76538198 211-213 11222358 denotes 25
16396836-10454587-76538199 214-216 10454587 denotes 26
16396836-12101420-76538200 217-219 12101420 denotes 28

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T10256 0-4 NN denotes mRNA
T10257 5-15 NN denotes expression
T10258 16-18 IN denotes of
T10259 19-22 NN denotes DNA
T10260 23-41 NN denotes methyltransferases
T10261 42-45 CC denotes and
T10262 46-64 NN denotes methyl-CpG-binding
T10263 65-73 NN denotes proteins
T10264 74-77 MD denotes may
T10265 78-81 RB denotes not
T10266 82-84 VB denotes be
T10267 85-95 VB denotes associated
T10268 96-100 IN denotes with
T10269 101-106 NN denotes IRF-4
T10270 107-115 NN denotes promoter
T10271 116-127 NN denotes methylation
T10272 128-133 IN denotes Since
T10273 134-143 NN denotes abundance
T10274 144-146 IN denotes of
T10275 147-151 NN denotes DNMT
T10276 152-155 CC denotes and
T10277 156-159 NN denotes MBP
T10278 160-170 VB denotes contribute
T10279 171-173 TO denotes to
T10280 174-182 NN denotes promoter
T10281 183-193 NN denotes regulation
T10282 194-197 IN denotes via
T10283 198-209 NN denotes methylation
T10284 210-211 -LRB- denotes (
T10285 211-219 CD denotes 25,26,28
T10286 219-220 -RRB- denotes )
T10287 220-221 -COMMA- denotes ,
T10288 222-224 PRP denotes we
T10289 225-232 VB denotes studied
T10290 233-238 PRP-DOLLAR- denotes their
T10291 239-243 NN denotes mRNA
T10292 244-254 NN denotes expression
T10293 255-257 TO denotes to
T10294 258-269 VB denotes investigate
T10295 270-271 DT denotes a
T10296 272-280 JJ denotes possible
T10297 281-290 NN denotes mechanism
T10298 291-294 IN denotes for
T10299 295-298 DT denotes the
T10300 299-307 VB denotes observed
T10301 308-319 NN denotes methylation
T10302 320-331 NN denotes differences
T10303 332-334 IN denotes in
T10304 335-338 DT denotes the
T10305 339-344 NN denotes IRF-4
T10306 345-353 NN denotes promoter
T10307 355-357 TO denotes To
T10308 358-362 DT denotes this
T10309 363-366 NN denotes end
T10310 366-367 -COMMA- denotes ,
T10311 368-370 PRP denotes we
T10312 371-374 VB denotes did
T10313 375-378 RB denotes not
T10314 379-385 VB denotes detect
T10315 386-387 DT denotes a
T10316 388-399 JJ denotes significant
T10317 400-410 NN denotes difference
T10318 411-413 IN denotes in
T10319 414-418 NN denotes DNMT
T10320 419-420 -LRB- denotes (
T10321 420-425 NN denotes DNMT1
T10322 425-426 -COMMA- denotes ,
T10323 427-433 NN denotes DNMT3A
T10324 434-437 CC denotes and
T10325 438-444 NN denotes DNMT3B
T10326 444-445 -RRB- denotes )
T10327 446-448 CC denotes or
T10328 449-452 NN denotes MBP
T10329 453-454 -LRB- denotes (
T10330 454-458 NN denotes MBD1
T10331 458-459 -COMMA- denotes ,
T10332 460-464 NN denotes MBD2
T10333 464-465 -COMMA- denotes ,
T10334 466-470 NN denotes MBD4
T10335 471-474 CC denotes and
T10336 475-479 NN denotes MeCP
T10337 479-480 -RRB- denotes )
T10338 481-485 NN denotes mRNA
T10339 486-496 NN denotes expression
T10340 497-504 IN denotes between
T10341 505-519 JJ denotes IRF-4-positive
T10342 520-523 CC denotes and
T10343 524-533 JJ denotes -negative
T10344 534-539 NN denotes cells
T10345 540-541 -LRB- denotes (
T10346 541-547 NN denotes Figure
T10347 548-550 NN denotes 5D
T10348 550-551 -RRB- denotes )
T10349 553-555 IN denotes In
T10350 556-560 NN denotes fact
T10351 560-561 -COMMA- denotes ,
T10352 562-565 DT denotes all
T10353 566-574 VB denotes analyzed
T10354 575-580 NN denotes cells
T10355 581-584 VB denotes had
T10356 585-593 JJ denotes moderate
T10357 594-596 TO denotes to
T10358 597-601 JJ denotes high
T10359 602-606 NN denotes mRNA
T10360 607-613 NN denotes levels
T10361 614-616 IN denotes of
T10362 617-622 DT denotes these
T10363 623-629 VB denotes tested
T10364 630-639 NN denotes DNMT/MBPs
T10365 640-643 CC denotes and
T10366 644-655 NN denotes differences
T10367 656-658 IN denotes in
T10368 659-669 NN denotes expression
T10369 670-674 VB denotes were
T10370 675-678 RB denotes not
T10371 679-689 VB denotes correlated
T10372 690-694 IN denotes with
T10373 695-700 NN denotes IRF-4
T10374 701-707 NN denotes status
T10375 709-714 DT denotes These
T10376 715-722 NN denotes results
T10377 723-731 VB denotes indicate
T10378 732-733 DT denotes a
T10379 734-742 JJ denotes distinct
T10380 743-748 NN denotes cause
T10381 749-751 IN denotes of
T10382 752-755 DT denotes the
T10383 756-767 NN denotes methylation
T10384 768-779 NN denotes differences
T10385 780-782 IN denotes in
T10386 783-797 JJ denotes IRF-4-positive
T10387 798-801 CC denotes and
T10388 802-811 JJ denotes -negative
T10389 812-817 NN denotes cells
T10390 818-824 RB denotes rather
T10391 825-829 IN denotes than
T10392 830-837 NN denotes changes
T10393 838-840 IN denotes in
T10394 841-844 DT denotes the
T10395 845-849 NN denotes DNMT
T10396 850-853 CC denotes and
T10397 854-857 NN denotes MBP
T10398 858-862 NN denotes mRNA
T10399 863-876 NN denotes transcription
R8480 T10257 T10256 arg1Of expression,mRNA
R8481 T10257 T10258 arg1Of expression,of
R8482 T10257 T10264 arg1Of expression,may
R8483 T10257 T10266 arg1Of expression,be
R8484 T10257 T10267 arg2Of expression,associated
R8485 T10260 T10259 arg1Of methyltransferases,DNA
R8486 T10260 T10261 arg1Of methyltransferases,and
R8487 T10261 T10258 arg2Of and,of
R8488 T10263 T10261 arg2Of proteins,and
R8489 T10263 T10262 arg1Of proteins,methyl-CpG-binding
R8490 T10267 T10264 arg2Of associated,may
R8491 T10267 T10265 arg1Of associated,not
R8492 T10267 T10266 arg2Of associated,be
R8493 T10267 T10268 arg1Of associated,with
R8494 T10271 T10268 arg2Of methylation,with
R8495 T10271 T10269 arg1Of methylation,IRF-4
R8496 T10271 T10270 arg1Of methylation,promoter
R8497 T10273 T10274 arg1Of abundance,of
R8498 T10273 T10278 arg1Of abundance,contribute
R8499 T10275 T10276 arg1Of DNMT,and
R8500 T10276 T10274 arg2Of and,of
R8501 T10277 T10276 arg2Of MBP,and
R8502 T10278 T10272 arg2Of contribute,Since
R8503 T10278 T10279 arg1Of contribute,to
R8504 T10278 T10282 arg1Of contribute,via
R8505 T10281 T10279 arg2Of regulation,to
R8506 T10281 T10280 arg1Of regulation,promoter
R8507 T10283 T10282 arg2Of methylation,via
R8508 T10283 T10284 arg1Of methylation,(
R8509 T10285 T10284 arg2Of "25,26,28",(
R8510 T10286 T10284 arg3Of ),(
R8511 T10288 T10289 arg1Of we,studied
R8512 T10288 T10294 arg1Of we,investigate
R8513 T10289 T10272 arg1Of studied,Since
R8514 T10289 T10287 arg1Of studied,","
R8515 T10289 T10293 modOf studied,to
R8516 T10292 T10289 arg2Of expression,studied
R8517 T10292 T10290 arg1Of expression,their
R8518 T10292 T10291 arg1Of expression,mRNA
R8519 T10294 T10293 arg1Of investigate,to
R8520 T10297 T10294 arg2Of mechanism,investigate
R8521 T10297 T10295 arg1Of mechanism,a
R8522 T10297 T10296 arg1Of mechanism,possible
R8523 T10297 T10298 arg1Of mechanism,for
R8524 T10302 T10298 arg2Of differences,for
R8525 T10302 T10299 arg1Of differences,the
R8526 T10302 T10300 arg2Of differences,observed
R8527 T10302 T10301 arg1Of differences,methylation
R8528 T10302 T10303 arg1Of differences,in
R8529 T10306 T10303 arg2Of promoter,in
R8530 T10306 T10304 arg1Of promoter,the
R8531 T10306 T10305 arg1Of promoter,IRF-4
R8532 T10309 T10307 arg2Of end,To
R8533 T10309 T10308 arg1Of end,this
R8534 T10311 T10312 arg1Of we,did
R8535 T10311 T10314 arg1Of we,detect
R8536 T10314 T10307 arg1Of detect,To
R8537 T10314 T10310 arg1Of detect,","
R8538 T10314 T10312 arg2Of detect,did
R8539 T10314 T10313 arg1Of detect,not
R8540 T10317 T10316 arg1Of difference,significant
R8541 T10317 T10318 arg1Of difference,in
R8542 T10317 T10320 arg1Of difference,(
R8543 T10317 T10327 arg1Of difference,or
R8544 T10319 T10318 arg2Of DNMT,in
R8545 T10321 T10322 arg1Of DNMT1,","
R8546 T10322 T10324 arg1Of ",",and
R8547 T10323 T10322 arg2Of DNMT3A,","
R8548 T10324 T10320 arg2Of and,(
R8549 T10325 T10324 arg2Of DNMT3B,and
R8550 T10326 T10320 arg3Of ),(
R8551 T10327 T10314 arg2Of or,detect
R8552 T10327 T10315 arg1Of or,a
R8553 T10328 T10329 arg1Of MBP,(
R8554 T10330 T10331 arg1Of MBD1,","
R8555 T10331 T10333 arg1Of ",",","
R8556 T10332 T10331 arg2Of MBD2,","
R8557 T10333 T10335 arg1Of ",",and
R8558 T10334 T10333 arg2Of MBD4,","
R8559 T10335 T10329 arg2Of and,(
R8560 T10336 T10335 arg2Of MeCP,and
R8561 T10337 T10329 arg3Of ),(
R8562 T10339 T10327 arg2Of expression,or
R8563 T10339 T10328 arg1Of expression,MBP
R8564 T10339 T10338 arg1Of expression,mRNA
R8565 T10339 T10340 arg1Of expression,between
R8566 T10341 T10342 arg1Of IRF-4-positive,and
R8567 T10343 T10342 arg2Of -negative,and
R8568 T10344 T10340 arg2Of cells,between
R8569 T10344 T10341 arg1Of cells,IRF-4-positive
R8570 T10344 T10343 arg1Of cells,-negative
R8571 T10344 T10345 arg1Of cells,(
R8572 T10347 T10345 arg2Of 5D,(
R8573 T10347 T10346 arg1Of 5D,Figure
R8574 T10348 T10345 arg3Of ),(
R8575 T10350 T10349 arg2Of fact,In
R8576 T10354 T10352 arg1Of cells,all
R8577 T10354 T10353 arg2Of cells,analyzed
R8578 T10354 T10355 arg1Of cells,had
R8579 T10355 T10349 arg1Of had,In
R8580 T10355 T10351 arg1Of had,","
R8581 T10355 T10365 arg1Of had,and
R8582 T10358 T10356 arg1Of high,moderate
R8583 T10358 T10357 arg1Of high,to
R8584 T10360 T10355 arg2Of levels,had
R8585 T10360 T10358 arg1Of levels,high
R8586 T10360 T10359 arg1Of levels,mRNA
R8587 T10360 T10361 arg1Of levels,of
R8588 T10364 T10361 arg2Of DNMT/MBPs,of
R8589 T10364 T10362 arg1Of DNMT/MBPs,these
R8590 T10364 T10363 arg2Of DNMT/MBPs,tested
R8591 T10366 T10367 arg1Of differences,in
R8592 T10366 T10369 arg1Of differences,were
R8593 T10366 T10371 arg2Of differences,correlated
R8594 T10368 T10367 arg2Of expression,in
R8595 T10371 T10365 arg2Of correlated,and
R8596 T10371 T10369 arg2Of correlated,were
R8597 T10371 T10370 arg1Of correlated,not
R8598 T10371 T10372 arg1Of correlated,with
R8599 T10374 T10372 arg2Of status,with
R8600 T10374 T10373 arg1Of status,IRF-4
R8601 T10376 T10375 arg1Of results,These
R8602 T10376 T10377 arg1Of results,indicate
R8603 T10380 T10377 arg2Of cause,indicate
R8604 T10380 T10378 arg1Of cause,a
R8605 T10380 T10379 arg1Of cause,distinct
R8606 T10380 T10381 arg1Of cause,of
R8607 T10380 T10390 arg1Of cause,rather
R8608 T10384 T10381 arg2Of differences,of
R8609 T10384 T10382 arg1Of differences,the
R8610 T10384 T10383 arg1Of differences,methylation
R8611 T10384 T10385 arg1Of differences,in
R8612 T10386 T10387 arg1Of IRF-4-positive,and
R8613 T10388 T10387 arg2Of -negative,and
R8614 T10389 T10385 arg2Of cells,in
R8615 T10389 T10386 arg1Of cells,IRF-4-positive
R8616 T10389 T10388 arg1Of cells,-negative
R8617 T10390 T10391 arg1Of rather,than
R8618 T10392 T10391 arg2Of changes,than
R8619 T10392 T10393 arg1Of changes,in
R8620 T10395 T10396 arg1Of DNMT,and
R8621 T10397 T10396 arg2Of MBP,and
R8622 T10399 T10393 arg2Of transcription,in
R8623 T10399 T10394 arg1Of transcription,the
R8624 T10399 T10395 arg1Of transcription,DNMT
R8625 T10399 T10397 arg1Of transcription,MBP
R8626 T10399 T10398 arg1Of transcription,mRNA

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T10406 460-464 Antecedent denotes MBD2
T10407 466-470 Antecedent denotes MBD4
T10408 475-479 Antecedent denotes MeCP
T10409 841-849 Anaphor denotes the DNMT
T10410 854-857 Anaphor denotes MBP
T10400 617-634 Anaphor denotes these tested DNMT
T10401 420-425 Antecedent denotes DNMT1
T10402 427-433 Antecedent denotes DNMT3A
T10403 438-444 Antecedent denotes DNMT3B
T10404 635-639 Anaphor denotes MBPs
T10405 454-458 Antecedent denotes MBD1
R8634 T10409 T10401 boundBy the DNMT,DNMT1
R8635 T10409 T10402 boundBy the DNMT,DNMT3A
R8636 T10409 T10403 boundBy the DNMT,DNMT3B
R8637 T10410 T10405 boundBy MBP,MBD1
R8638 T10410 T10406 boundBy MBP,MBD2
R8639 T10410 T10407 boundBy MBP,MBD4
R8640 T10410 T10408 boundBy MBP,MeCP
R8627 T10400 T10401 boundBy these tested DNMT,DNMT1
R8628 T10400 T10402 boundBy these tested DNMT,DNMT3A
R8629 T10400 T10403 boundBy these tested DNMT,DNMT3B
R8630 T10404 T10405 boundBy MBPs,MBD1
R8631 T10404 T10406 boundBy MBPs,MBD2
R8632 T10404 T10407 boundBy MBPs,MBD4
R8633 T10404 T10408 boundBy MBPs,MeCP

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T10434 0-4 NNP denotes mRNA
T10435 5-15 NN denotes expression
T10436 16-18 IN denotes of
T10437 19-22 NNP denotes DNA
T10438 23-41 NNS denotes methyltransferases
T10439 42-45 CC denotes and
T10440 46-64 JJ denotes methyl-CpG-binding
T10441 65-73 NNS denotes proteins
T10442 74-77 MD denotes may
T10443 78-81 RB denotes not
T10444 82-84 VB denotes be
T10445 85-95 VBN denotes associated
T10446 96-100 IN denotes with
T10447 101-106 JJ denotes IRF-4
T10448 107-115 NN denotes promoter
T10449 116-127 NN denotes methylation
T10450 128-133 IN denotes Since
T10451 134-143 NN denotes abundance
T10452 144-146 IN denotes of
T10453 147-151 NNP denotes DNMT
T10454 152-155 CC denotes and
T10455 156-159 NNP denotes MBP
T10456 160-170 VBP denotes contribute
T10457 171-173 TO denotes to
T10458 174-182 NN denotes promoter
T10459 183-193 NN denotes regulation
T10460 194-197 IN denotes via
T10461 198-209 NN denotes methylation
T10462 210-211 -LRB- denotes (
T10463 211-219 CD denotes 25,26,28
T10464 219-220 -RRB- denotes )
T10465 220-221 , denotes ,
T10466 222-224 PRP denotes we
T10467 225-232 VBD denotes studied
T10468 233-238 PRP$ denotes their
T10469 239-243 NNP denotes mRNA
T10470 244-254 NN denotes expression
T10471 255-257 TO denotes to
T10472 258-269 VB denotes investigate
T10473 270-271 DT denotes a
T10474 272-280 JJ denotes possible
T10475 281-290 NN denotes mechanism
T10476 291-294 IN denotes for
T10477 295-298 DT denotes the
T10478 299-307 JJ denotes observed
T10479 308-319 NN denotes methylation
T10480 320-331 NNS denotes differences
T10481 332-334 IN denotes in
T10482 335-338 DT denotes the
T10483 339-344 NN denotes IRF-4
T10484 345-353 NN denotes promoter
T10485 353-354 . denotes .
T10486 355-357 TO denotes To
T10487 358-362 DT denotes this
T10488 363-366 NN denotes end
T10489 366-367 , denotes ,
T10490 368-370 PRP denotes we
T10491 371-374 VBD denotes did
T10492 375-378 RB denotes not
T10493 379-385 VB denotes detect
T10494 386-387 DT denotes a
T10495 388-399 JJ denotes significant
T10496 400-410 NN denotes difference
T10497 411-413 IN denotes in
T10498 414-418 NNP denotes DNMT
T10499 419-420 -LRB- denotes (
T10500 420-425 NNP denotes DNMT1
T10501 425-426 , denotes ,
T10502 427-433 NNP denotes DNMT3A
T10503 434-437 CC denotes and
T10504 438-444 NNP denotes DNMT3B
T10505 444-445 -RRB- denotes )
T10506 446-448 CC denotes or
T10507 449-452 NNP denotes MBP
T10508 453-454 -LRB- denotes (
T10509 454-458 NNP denotes MBD1
T10510 458-459 , denotes ,
T10511 460-464 NNP denotes MBD2
T10512 464-465 , denotes ,
T10513 466-470 NNP denotes MBD4
T10514 471-474 CC denotes and
T10515 475-479 NNP denotes MeCP
T10516 479-480 -RRB- denotes )
T10517 481-485 NNP denotes mRNA
T10518 486-496 NN denotes expression
T10519 497-504 IN denotes between
T10520 505-519 JJ denotes IRF-4-positive
T10521 520-523 CC denotes and
T10522 524-525 : denotes -
T10523 525-533 JJ denotes negative
T10524 534-539 NNS denotes cells
T10525 540-541 -LRB- denotes (
T10526 541-547 NN denotes Figure
T10527 548-550 CD denotes 5D
T10528 550-551 -RRB- denotes )
T10529 551-552 . denotes .
T10530 553-555 IN denotes In
T10531 556-560 NN denotes fact
T10532 560-561 , denotes ,
T10533 562-565 DT denotes all
T10534 566-574 VBD denotes analyzed
T10535 575-580 NNS denotes cells
T10536 581-584 VBD denotes had
T10537 585-593 JJ denotes moderate
T10538 594-596 TO denotes to
T10539 597-601 JJ denotes high
T10540 602-606 NN denotes mRNA
T10541 607-613 NNS denotes levels
T10542 614-616 IN denotes of
T10543 617-622 DT denotes these
T10544 623-629 VBN denotes tested
T10545 630-639 NNP denotes DNMT/MBPs
T10546 640-643 CC denotes and
T10547 644-655 NNS denotes differences
T10548 656-658 IN denotes in
T10549 659-669 NN denotes expression
T10550 670-674 VBD denotes were
T10551 675-678 RB denotes not
T10552 679-689 VBN denotes correlated
T10553 690-694 IN denotes with
T10554 695-700 JJ denotes IRF-4
T10555 701-707 NN denotes status
T10556 707-708 . denotes .
T10557 709-714 DT denotes These
T10558 715-722 NNS denotes results
T10559 723-731 VBP denotes indicate
T10560 732-733 DT denotes a
T10561 734-742 JJ denotes distinct
T10562 743-748 NN denotes cause
T10563 749-751 IN denotes of
T10564 752-755 DT denotes the
T10565 756-767 NN denotes methylation
T10566 768-779 NNS denotes differences
T10567 780-782 IN denotes in
T10568 783-797 JJ denotes IRF-4-positive
T10569 798-801 CC denotes and
T10570 802-803 : denotes -
T10571 803-811 JJ denotes negative
T10572 812-817 NNS denotes cells
T10573 818-824 RB denotes rather
T10574 825-829 IN denotes than
T10575 830-837 NNS denotes changes
T10576 838-840 IN denotes in
T10577 841-844 DT denotes the
T10578 845-849 NNP denotes DNMT
T10579 850-853 CC denotes and
T10580 854-857 NNP denotes MBP
T10581 858-862 NNP denotes mRNA
T10582 863-876 NN denotes transcription
T10583 876-877 . denotes .
R8641 T10434 T10435 compound mRNA,expression
R8642 T10435 T10445 nsubjpass expression,associated
R8643 T10436 T10435 prep of,expression
R8644 T10437 T10438 compound DNA,methyltransferases
R8645 T10438 T10436 pobj methyltransferases,of
R8646 T10439 T10438 cc and,methyltransferases
R8647 T10440 T10441 amod methyl-CpG-binding,proteins
R8648 T10441 T10438 conj proteins,methyltransferases
R8649 T10442 T10445 aux may,associated
R8650 T10443 T10445 neg not,associated
R8651 T10444 T10445 auxpass be,associated
R8652 T10445 T10445 ROOT associated,associated
R8653 T10446 T10445 prep with,associated
R8654 T10447 T10449 amod IRF-4,methylation
R8655 T10448 T10449 compound promoter,methylation
R8656 T10449 T10446 pobj methylation,with
R8657 T10450 T10456 mark Since,contribute
R8658 T10451 T10456 nsubj abundance,contribute
R8659 T10452 T10451 prep of,abundance
R8660 T10453 T10452 pobj DNMT,of
R8661 T10454 T10453 cc and,DNMT
R8662 T10455 T10453 conj MBP,DNMT
R8663 T10456 T10467 advcl contribute,studied
R8664 T10457 T10458 aux to,promoter
R8665 T10458 T10459 compound promoter,regulation
R8666 T10459 T10456 dobj regulation,contribute
R8667 T10460 T10459 prep via,regulation
R8668 T10461 T10460 pobj methylation,via
R8669 T10462 T10461 punct (,methylation
R8670 T10463 T10461 appos "25,26,28",methylation
R8671 T10464 T10461 punct ),methylation
R8672 T10465 T10467 punct ",",studied
R8698 T10491 T10493 aux did,detect
R8699 T10492 T10493 neg not,detect
R8700 T10493 T10493 ROOT detect,detect
R8701 T10494 T10496 det a,difference
R8702 T10495 T10496 amod significant,difference
R8703 T10496 T10493 dobj difference,detect
R8704 T10497 T10496 prep in,difference
R8705 T10498 T10497 pobj DNMT,in
R8706 T10499 T10500 punct (,DNMT1
R8707 T10500 T10498 appos DNMT1,DNMT
R8708 T10501 T10500 punct ",",DNMT1
R8709 T10502 T10500 conj DNMT3A,DNMT1
R8710 T10503 T10502 cc and,DNMT3A
R8725 T10518 T10496 conj expression,difference
R8726 T10519 T10518 prep between,expression
R8727 T10520 T10519 pobj IRF-4-positive,between
R8728 T10521 T10520 cc and,IRF-4-positive
R8729 T10522 T10523 punct -,negative
R8730 T10523 T10524 amod negative,cells
R8731 T10524 T10520 conj cells,IRF-4-positive
R8732 T10525 T10526 punct (,Figure
R8733 T10526 T10524 appos Figure,cells
R8734 T10527 T10526 nummod 5D,Figure
R8735 T10528 T10526 punct ),Figure
R8736 T10529 T10493 punct .,detect
R8737 T10530 T10534 prep In,analyzed
R8738 T10531 T10530 pobj fact,In
R8739 T10532 T10534 punct ",",analyzed
R8740 T10533 T10534 nsubj all,analyzed
R8741 T10534 T10534 ROOT analyzed,analyzed
R8742 T10535 T10536 nsubj cells,had
R8743 T10536 T10534 ccomp had,analyzed
R8744 T10537 T10536 dobj moderate,had
R8745 T10538 T10552 prep to,correlated
R8746 T10539 T10541 amod high,levels
R8747 T10540 T10541 compound mRNA,levels
R8748 T10541 T10538 pobj levels,to
R8749 T10542 T10541 prep of,levels
R8750 T10543 T10545 det these,DNMT/MBPs
R8751 T10544 T10545 amod tested,DNMT/MBPs
R8752 T10545 T10542 pobj DNMT/MBPs,of
R8753 T10546 T10545 cc and,DNMT/MBPs
R8754 T10547 T10541 conj differences,levels
R8755 T10548 T10547 prep in,differences
R8756 T10549 T10548 pobj expression,in
R8757 T10550 T10552 auxpass were,correlated
R8758 T10551 T10552 neg not,correlated
R8759 T10552 T10534 conj correlated,analyzed
R8760 T10553 T10552 prep with,correlated
R8761 T10554 T10555 amod IRF-4,status
R8762 T10555 T10553 pobj status,with
R8763 T10556 T10534 punct .,analyzed
R8764 T10557 T10558 det These,results
R8765 T10558 T10559 nsubj results,indicate
R8766 T10559 T10559 ROOT indicate,indicate
R8767 T10560 T10562 det a,cause
R8768 T10561 T10562 amod distinct,cause
R8769 T10562 T10559 dobj cause,indicate
R8770 T10563 T10562 prep of,cause
R8771 T10564 T10566 det the,differences
R8772 T10565 T10566 compound methylation,differences
R8773 T10566 T10563 pobj differences,of
R8774 T10567 T10566 prep in,differences
R8775 T10568 T10572 amod IRF-4-positive,cells
R8776 T10569 T10568 cc and,IRF-4-positive
R8777 T10570 T10571 punct -,negative
R8778 T10571 T10572 amod negative,cells
R8779 T10572 T10567 pobj cells,in
R8780 T10573 T10574 advmod rather,than
R8781 T10574 T10572 cc than,cells
R8782 T10575 T10574 pobj changes,than
R8783 T10576 T10575 prep in,changes
R8784 T10577 T10578 det the,DNMT
R8785 T10578 T10576 pobj DNMT,in
R8786 T10579 T10578 cc and,DNMT
R8787 T10580 T10581 compound MBP,mRNA
R8788 T10581 T10578 conj mRNA,DNMT
R8789 T10582 T10575 conj transcription,changes
R8790 T10583 T10559 punct .,indicate
R8673 T10466 T10467 nsubj we,studied
R8674 T10467 T10445 advcl studied,associated
R8675 T10468 T10470 poss their,expression
R8676 T10469 T10470 compound mRNA,expression
R8677 T10470 T10467 dobj expression,studied
R8678 T10471 T10472 aux to,investigate
R8679 T10472 T10467 advcl investigate,studied
R8680 T10473 T10475 det a,mechanism
R8681 T10474 T10475 amod possible,mechanism
R8682 T10475 T10472 dobj mechanism,investigate
R8683 T10476 T10475 prep for,mechanism
R8684 T10477 T10480 det the,differences
R8685 T10478 T10480 amod observed,differences
R8686 T10479 T10480 compound methylation,differences
R8687 T10480 T10476 pobj differences,for
R8688 T10481 T10480 prep in,differences
R8689 T10482 T10484 det the,promoter
R8690 T10483 T10484 compound IRF-4,promoter
R8691 T10484 T10481 pobj promoter,in
R8692 T10485 T10445 punct .,associated
R8693 T10486 T10493 prep To,detect
R8694 T10487 T10488 det this,end
R8695 T10488 T10486 pobj end,To
R8696 T10489 T10493 punct ",",detect
R8697 T10490 T10493 nsubj we,detect
R8711 T10504 T10502 conj DNMT3B,DNMT3A
R8712 T10505 T10504 punct ),DNMT3B
R8713 T10506 T10504 cc or,DNMT3B
R8714 T10507 T10504 conj MBP,DNMT3B
R8715 T10508 T10509 punct (,MBD1
R8716 T10509 T10504 conj MBD1,DNMT3B
R8717 T10510 T10509 punct ",",MBD1
R8718 T10511 T10509 conj MBD2,MBD1
R8719 T10512 T10511 punct ",",MBD2
R8720 T10513 T10511 conj MBD4,MBD2
R8721 T10514 T10513 cc and,MBD4
R8722 T10515 T10513 conj MeCP,MBD4
R8723 T10516 T10509 punct ),MBD1
R8724 T10517 T10518 compound mRNA,expression

GO-BP

Id Subject Object Predicate Lexical cue
T10249 116-127 http://purl.obolibrary.org/obo/GO_0032259 denotes methylation
T10250 198-209 http://purl.obolibrary.org/obo/GO_0032259 denotes methylation
T10251 308-319 http://purl.obolibrary.org/obo/GO_0032259 denotes methylation
T10252 756-767 http://purl.obolibrary.org/obo/GO_0032259 denotes methylation
T10253 183-193 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation
T10254 858-876 http://purl.obolibrary.org/obo/GO_0009299 denotes mRNA transcription
T10255 863-876 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription

GO-MF

Id Subject Object Predicate Lexical cue
T10589 46-64 http://purl.obolibrary.org/obo/GO_0008327 denotes methyl-CpG-binding
T10590 57-64 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T10591 57-73 http://purl.obolibrary.org/obo/GO_0005515 denotes binding proteins

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T10779 19-41 Protein denotes DNA methyltransferases
T10780 46-73 Protein denotes methyl-CpG-binding proteins
T10781 101-115 Protein denotes IRF-4 promoter
T10782 5-15 Gene_expression denotes expression
T10783 5-15 Gene_expression denotes expression
T10784 85-95 Positive_regulation denotes associated
T10785 85-95 Positive_regulation denotes associated
T10786 147-151 Protein denotes DNMT
T10787 156-159 Protein denotes MBP
T10788 339-353 Protein denotes IRF-4 promoter
T10789 134-143 Localization denotes abundance
T10790 134-143 Localization denotes abundance
T10791 414-418 Protein denotes DNMT
T10792 420-425 Protein denotes DNMT1
T10793 427-433 Protein denotes DNMT3A
T10794 438-444 Protein denotes DNMT3B
T10795 449-452 Protein denotes MBP
T10796 454-458 Protein denotes MBD1
T10797 460-464 Protein denotes MBD2
T10798 466-470 Protein denotes MBD4
T10799 475-479 Protein denotes MeCP
T10800 400-410 Regulation denotes difference
T10801 486-496 Transcription denotes expression
T10802 486-496 Transcription denotes expression
T10803 486-496 Transcription denotes expression
T10804 486-496 Transcription denotes expression
T10805 486-496 Transcription denotes expression
T10806 486-496 Transcription denotes expression
T10807 486-496 Transcription denotes expression
T10808 486-496 Transcription denotes expression
T10809 486-496 Transcription denotes expression
T10810 400-410 Regulation denotes difference
T10811 400-410 Regulation denotes difference
T10812 400-410 Regulation denotes difference
T10813 400-410 Regulation denotes difference
T10814 400-410 Regulation denotes difference
T10815 400-410 Regulation denotes difference
T10816 400-410 Regulation denotes difference
T10817 400-410 Regulation denotes difference
T10818 400-410 Regulation denotes difference
T10819 630-634 Protein denotes DNMT
T10820 635-639 Protein denotes MBPs
T10821 695-700 Protein denotes IRF-4
T10822 607-613 Transcription denotes levels
T10823 607-613 Transcription denotes levels
T10824 845-849 Protein denotes DNMT
T10825 854-862 Protein denotes MBP mRNA
T10826 863-876 Transcription denotes transcription
T10827 863-876 Transcription denotes transcription
R8927 T10779 T10782 themeOf DNA methyltransferases,expression
R8928 T10780 T10783 themeOf methyl-CpG-binding proteins,expression
R8929 T10782 T10784 themeOf expression,associated
R8930 T10783 T10785 themeOf expression,associated
R8931 T10786 T10789 themeOf DNMT,abundance
R8932 T10787 T10790 themeOf MBP,abundance
R8933 T10791 T10800 themeOf DNMT,difference
R8934 T10791 T10801 themeOf DNMT,expression
R8935 T10792 T10802 themeOf DNMT1,expression
R8936 T10793 T10803 themeOf DNMT3A,expression
R8937 T10794 T10804 themeOf DNMT3B,expression
R8938 T10795 T10805 themeOf MBP,expression
R8939 T10796 T10806 themeOf MBD1,expression
R8940 T10797 T10807 themeOf MBD2,expression
R8941 T10798 T10808 themeOf MBD4,expression
R8942 T10799 T10809 themeOf MeCP,expression
R8943 T10801 T10810 themeOf expression,difference
R8944 T10802 T10811 themeOf expression,difference
R8945 T10803 T10812 themeOf expression,difference
R8946 T10804 T10813 themeOf expression,difference
R8947 T10805 T10814 themeOf expression,difference
R8948 T10806 T10815 themeOf expression,difference
R8949 T10807 T10816 themeOf expression,difference
R8950 T10808 T10817 themeOf expression,difference
R8951 T10809 T10818 themeOf expression,difference
R8952 T10819 T10822 themeOf DNMT,levels
R8953 T10820 T10823 themeOf MBPs,levels
R8954 T10824 T10826 themeOf DNMT,transcription
R8955 T10825 T10827 themeOf MBP mRNA,transcription

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue Negation
T10212 481-496 Transcription denotes mRNA expression
T10213 481-496 Transcription denotes mRNA expression
T10214 481-496 Transcription denotes mRNA expression
T10215 481-496 Transcription denotes mRNA expression
T10216 505-510 Protein denotes IRF-4
T10217 511-519 Gene_expression denotes positive
T10218 525-533 Gene_expression denotes negative true
T10219 602-613 Transcription denotes mRNA levels
T10220 602-613 Transcription denotes mRNA levels
T10221 602-613 Transcription denotes mRNA levels
T10222 602-613 Transcription denotes mRNA levels
T10223 602-613 Transcription denotes mRNA levels
T10224 602-613 Transcription denotes mRNA levels
T10225 602-613 Transcription denotes mRNA levels
T10226 659-669 Transcription denotes expression
T10227 659-669 Transcription denotes expression
T10228 659-669 Transcription denotes expression
T10229 659-669 Transcription denotes expression
T10230 659-669 Transcription denotes expression
T10231 659-669 Transcription denotes expression
T10232 659-669 Transcription denotes expression
T10233 695-700 Protein denotes IRF-4
T10234 783-788 Protein denotes IRF-4
T10235 789-797 Gene_expression denotes positive
T10236 803-811 Gene_expression denotes negative true
T10237 863-876 Transcription denotes transcription
T10238 863-876 Transcription denotes transcription
T10239 863-876 Transcription denotes transcription
T10240 863-876 Transcription denotes transcription
T10241 863-876 Transcription denotes transcription
T10242 863-876 Transcription denotes transcription
T10243 863-876 Transcription denotes transcription
T10198 101-106 Protein denotes IRF-4
T10199 174-182 Entity denotes promoter
T10200 183-193 Regulation denotes regulation
T10201 339-344 Protein denotes IRF-4
T10202 420-425 Protein denotes DNMT1
T10203 427-433 Protein denotes DNMT3A
T10204 438-444 Protein denotes DNMT3B
T10205 454-458 Protein denotes MBD1
T10206 460-464 Protein denotes MBD2
T10207 466-470 Protein denotes MBD4
T10208 475-479 Protein denotes MeCP
T10209 481-496 Transcription denotes mRNA expression
T10210 481-496 Transcription denotes mRNA expression
T10211 481-496 Transcription denotes mRNA expression
R8449 T10202 T10225 themeOf DNMT1,mRNA levels
R8450 T10202 T10228 themeOf DNMT1,expression
R8451 T10202 T10240 themeOf DNMT1,transcription
R8452 T10203 T10215 themeOf DNMT3A,mRNA expression
R8453 T10203 T10222 themeOf DNMT3A,mRNA levels
R8454 T10203 T10229 themeOf DNMT3A,expression
R8455 T10203 T10238 themeOf DNMT3A,transcription
R8456 T10204 T10214 themeOf DNMT3B,mRNA expression
R8457 T10204 T10223 themeOf DNMT3B,mRNA levels
R8458 T10204 T10232 themeOf DNMT3B,expression
R8459 T10204 T10239 themeOf DNMT3B,transcription
R8460 T10205 T10213 themeOf MBD1,mRNA expression
R8461 T10205 T10224 themeOf MBD1,mRNA levels
R8462 T10205 T10231 themeOf MBD1,expression
R8463 T10205 T10237 themeOf MBD1,transcription
R8464 T10206 T10210 themeOf MBD2,mRNA expression
R8465 T10206 T10221 themeOf MBD2,mRNA levels
R8466 T10206 T10230 themeOf MBD2,expression
R8467 T10206 T10241 themeOf MBD2,transcription
R8468 T10207 T10209 themeOf MBD4,mRNA expression
R8469 T10207 T10219 themeOf MBD4,mRNA levels
R8470 T10207 T10227 themeOf MBD4,expression
R8471 T10207 T10242 themeOf MBD4,transcription
R8472 T10208 T10211 themeOf MeCP,mRNA expression
R8473 T10208 T10220 themeOf MeCP,mRNA levels
R8474 T10208 T10226 themeOf MeCP,expression
R8475 T10208 T10243 themeOf MeCP,transcription
R8476 T10216 T10217 themeOf IRF-4,positive
R8477 T10216 T10218 themeOf IRF-4,negative
R8478 T10234 T10235 themeOf IRF-4,positive
R8479 T10234 T10236 themeOf IRF-4,negative
R8446 T10199 T10200 themeOf promoter,regulation
R8447 T10199 T10201 partOf promoter,IRF-4
R8448 T10202 T10212 themeOf DNMT1,mRNA expression

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T10411 19-41 Q9Y6K1 denotes DNA methyltransferases
T10412 19-41 Q9UIS9 denotes DNA methyltransferases
T10413 19-41 Q9UBC3 denotes DNA methyltransferases
T10414 19-41 Q9UBB5 denotes DNA methyltransferases
T10415 19-41 P26358 denotes DNA methyltransferases
T10416 19-41 O95243 denotes DNA methyltransferases
T10417 46-73 P51608 denotes methyl-CpG-binding proteins
T10418 101-106 Q15306 denotes IRF-4
T10419 147-151 P26358 denotes DNMT
T10420 339-344 Q15306 denotes IRF-4
T10421 414-418 P26358 denotes DNMT
T10422 420-425 P26358 denotes DNMT1
T10423 427-433 Q9Y6K1 denotes DNMT3A
T10424 438-444 Q9UBC3 denotes DNMT3B
T10425 454-458 Q9UIS9 denotes MBD1
T10426 460-464 Q9UBB5 denotes MBD2
T10427 466-470 O95243 denotes MBD4
T10428 475-479 P51608 denotes MeCP
T10429 505-510 Q15306 denotes IRF-4
T10430 630-634 P26358 denotes DNMT
T10431 695-700 Q15306 denotes IRF-4
T10432 783-788 Q15306 denotes IRF-4
T10433 845-849 P26358 denotes DNMT