PMC:1310901 / 17339-17534
Annnotations
bionlp-st-ge-2016-reference-eval
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T8468 | 24-37 | Transcription | denotes | transcription |
T8469 | 180-188 | Gene_expression | denotes | negative |
T8476 | 18-23 | Protein | denotes | IRF-4 |
T8477 | 174-179 | Protein | denotes | IRF-4 |
R7045 | T8476 | T8468 | themeOf | IRF-4,transcription |
events-check-again
Id | Subject | Object | Predicate | Lexical cue | Negation |
---|---|---|---|---|---|
T8443 | 18-23 | Protein | denotes | IRF-4 | |
T8444 | 24-37 | Transcription | denotes | transcription | |
T8445 | 174-179 | Protein | denotes | IRF-4 | |
T8446 | 180-188 | Gene_expression | denotes | negative | true |
R7036 | T8443 | T8444 | themeOf | IRF-4,transcription | |
R7037 | T8445 | T8446 | themeOf | IRF-4,negative |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T8388 | 57-62 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T8389 | 189-194 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T8390 | 57-76 | http://purl.obolibrary.org/obo/GO_0009986 | denotes | cells is associated |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7839 | 0-195 | Sentence | denotes | This implied that IRF-4 transcription in SD-1 and BV-173 cells is associated with less promoter methylation (in BV-173 especially at HpaII sites) as compared with the tested IRF-4-negative cells. |
T128 | 0-195 | Sentence | denotes | This implied that IRF-4 transcription in SD-1 and BV-173 cells is associated with less promoter methylation (in BV-173 especially at HpaII sites) as compared with the tested IRF-4-negative cells. |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T8074 | 0-4 | DT | denotes | This |
T8075 | 5-12 | VB | denotes | implied |
T8076 | 13-17 | IN | denotes | that |
T8077 | 18-23 | NN | denotes | IRF-4 |
T8078 | 24-37 | NN | denotes | transcription |
T8079 | 38-40 | IN | denotes | in |
T8080 | 41-45 | NN | denotes | SD-1 |
T8081 | 46-49 | CC | denotes | and |
T8082 | 50-56 | NN | denotes | BV-173 |
T8083 | 57-62 | NN | denotes | cells |
T8084 | 63-65 | VB | denotes | is |
T8085 | 66-76 | VB | denotes | associated |
T8086 | 77-81 | IN | denotes | with |
T8087 | 82-86 | JJ | denotes | less |
T8088 | 87-95 | NN | denotes | promoter |
T8089 | 96-107 | NN | denotes | methylation |
T8090 | 108-109 | -LRB- | denotes | ( |
T8091 | 109-111 | IN | denotes | in |
T8092 | 112-118 | NN | denotes | BV-173 |
T8093 | 119-129 | RB | denotes | especially |
T8094 | 130-132 | IN | denotes | at |
T8095 | 133-138 | NN | denotes | HpaII |
T8096 | 139-144 | NN | denotes | sites |
T8097 | 144-145 | -RRB- | denotes | ) |
T8098 | 146-148 | IN | denotes | as |
T8099 | 149-157 | VB | denotes | compared |
T8100 | 158-162 | IN | denotes | with |
T8101 | 163-166 | DT | denotes | the |
T8102 | 167-173 | VB | denotes | tested |
T8103 | 174-188 | JJ | denotes | IRF-4-negative |
T8104 | 189-194 | NN | denotes | cells |
R6721 | T8074 | T8075 | arg1Of | This,implied |
R6722 | T8078 | T8077 | arg1Of | transcription,IRF-4 |
R6723 | T8078 | T8079 | arg1Of | transcription,in |
R6724 | T8078 | T8084 | arg1Of | transcription,is |
R6725 | T8078 | T8085 | arg2Of | transcription,associated |
R6726 | T8080 | T8081 | arg1Of | SD-1,and |
R6727 | T8082 | T8081 | arg2Of | BV-173,and |
R6728 | T8083 | T8079 | arg2Of | cells,in |
R6729 | T8083 | T8080 | arg1Of | cells,SD-1 |
R6730 | T8083 | T8082 | arg1Of | cells,BV-173 |
R6731 | T8085 | T8075 | arg2Of | associated,implied |
R6732 | T8085 | T8076 | arg1Of | associated,that |
R6733 | T8085 | T8084 | arg2Of | associated,is |
R6734 | T8085 | T8086 | arg1Of | associated,with |
R6735 | T8085 | T8090 | arg1Of | associated,( |
R6736 | T8085 | T8098 | arg1Of | associated,as |
R6737 | T8089 | T8086 | arg2Of | methylation,with |
R6738 | T8089 | T8087 | arg1Of | methylation,less |
R6739 | T8089 | T8088 | arg1Of | methylation,promoter |
R6740 | T8091 | T8090 | arg2Of | in,( |
R6741 | T8092 | T8091 | arg2Of | BV-173,in |
R6742 | T8092 | T8094 | arg1Of | BV-173,at |
R6743 | T8094 | T8093 | arg1Of | at,especially |
R6744 | T8096 | T8094 | arg2Of | sites,at |
R6745 | T8096 | T8095 | arg1Of | sites,HpaII |
R6746 | T8097 | T8090 | arg3Of | ),( |
R6747 | T8099 | T8098 | arg2Of | compared,as |
R6748 | T8099 | T8100 | arg1Of | compared,with |
R6749 | T8104 | T8100 | arg2Of | cells,with |
R6750 | T8104 | T8101 | arg1Of | cells,the |
R6751 | T8104 | T8102 | arg2Of | cells,tested |
R6752 | T8104 | T8103 | arg1Of | cells,IRF-4-negative |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T8342 | 0-4 | DT | denotes | This |
T8343 | 5-12 | VBD | denotes | implied |
T8344 | 13-17 | IN | denotes | that |
T8345 | 18-23 | JJ | denotes | IRF-4 |
T8346 | 24-37 | NN | denotes | transcription |
T8347 | 38-40 | IN | denotes | in |
T8348 | 41-45 | NN | denotes | SD-1 |
T8349 | 46-49 | CC | denotes | and |
T8350 | 50-56 | JJ | denotes | BV-173 |
T8351 | 57-62 | NNS | denotes | cells |
T8352 | 63-65 | VBZ | denotes | is |
T8353 | 66-76 | VBN | denotes | associated |
T8354 | 77-81 | IN | denotes | with |
T8355 | 82-86 | JJR | denotes | less |
T8356 | 87-95 | NN | denotes | promoter |
T8357 | 96-107 | NN | denotes | methylation |
T8358 | 108-109 | -LRB- | denotes | ( |
T8359 | 109-111 | IN | denotes | in |
T8360 | 112-118 | NN | denotes | BV-173 |
T8361 | 119-129 | RB | denotes | especially |
T8362 | 130-132 | IN | denotes | at |
T8363 | 133-138 | NNP | denotes | HpaII |
T8364 | 139-144 | NNS | denotes | sites |
T8365 | 144-145 | -RRB- | denotes | ) |
T8366 | 146-148 | IN | denotes | as |
T8367 | 149-157 | VBN | denotes | compared |
T8368 | 158-162 | IN | denotes | with |
T8369 | 163-166 | DT | denotes | the |
T8370 | 167-173 | VBN | denotes | tested |
T8371 | 174-188 | JJ | denotes | IRF-4-negative |
T8372 | 189-194 | NNS | denotes | cells |
T8373 | 194-195 | . | denotes | . |
R6982 | T8342 | T8343 | nsubj | This,implied |
R6983 | T8343 | T8343 | ROOT | implied,implied |
R6984 | T8344 | T8353 | mark | that,associated |
R6985 | T8345 | T8346 | amod | IRF-4,transcription |
R6986 | T8346 | T8353 | nsubjpass | transcription,associated |
R6987 | T8347 | T8346 | prep | in,transcription |
R6988 | T8348 | T8347 | pobj | SD-1,in |
R6989 | T8349 | T8348 | cc | and,SD-1 |
R7009 | T8369 | T8372 | det | the,cells |
R7010 | T8370 | T8372 | amod | tested,cells |
R7011 | T8371 | T8372 | amod | IRF-4-negative,cells |
R7012 | T8372 | T8368 | pobj | cells,with |
R7013 | T8373 | T8343 | punct | .,implied |
R6990 | T8350 | T8351 | amod | BV-173,cells |
R6991 | T8351 | T8348 | conj | cells,SD-1 |
R6992 | T8352 | T8353 | auxpass | is,associated |
R6993 | T8353 | T8343 | ccomp | associated,implied |
R6994 | T8354 | T8353 | prep | with,associated |
R6995 | T8355 | T8356 | amod | less,promoter |
R6996 | T8356 | T8357 | compound | promoter,methylation |
R6997 | T8357 | T8354 | pobj | methylation,with |
R6998 | T8358 | T8357 | punct | (,methylation |
R6999 | T8359 | T8357 | prep | in,methylation |
R7000 | T8360 | T8359 | pobj | BV-173,in |
R7001 | T8361 | T8362 | advmod | especially,at |
R7002 | T8362 | T8357 | prep | at,methylation |
R7003 | T8363 | T8364 | compound | HpaII,sites |
R7004 | T8364 | T8362 | pobj | sites,at |
R7005 | T8365 | T8353 | punct | ),associated |
R7006 | T8366 | T8367 | mark | as,compared |
R7007 | T8367 | T8343 | advcl | compared,implied |
R7008 | T8368 | T8367 | prep | with,compared |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7846 | 96-107 | http://purl.obolibrary.org/obo/GO_0032259 | denotes | methylation |
T7851 | 24-37 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcription |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T8461 | 18-23 | Protein | denotes | IRF-4 |
T8462 | 133-144 | Protein | denotes | HpaII sites |
T8463 | 24-37 | Transcription | denotes | transcription |
R7042 | T8461 | T8463 | themeOf | IRF-4,transcription |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue | Negation |
---|---|---|---|---|---|
T7827 | 18-23 | Protein | denotes | IRF-4 | |
T7828 | 24-37 | Transcription | denotes | transcription | |
T7829 | 174-179 | Protein | denotes | IRF-4 | |
T7830 | 180-188 | Gene_expression | denotes | negative | true |
R6495 | T7827 | T7828 | themeOf | IRF-4,transcription | |
R6496 | T7829 | T7830 | themeOf | IRF-4,negative |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T8111 | 18-23 | Q15306 | denotes | IRF-4 |
T8112 | 174-179 | Q15306 | denotes | IRF-4 |
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7813 | 18-23 | Protein | denotes | IRF-4 |
T7814 | 24-37 | Transcription | denotes | transcription |
T7815 | 174-179 | Protein | denotes | IRF-4 |
T7816 | 180-188 | Gene_expression | denotes | negative |
R6489 | T7813 | T7814 | themeOf | IRF-4,transcription |
R6490 | T7815 | T7816 | themeOf | IRF-4,negative |