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PMC:1310901 / 14864-15047 JSONTXT

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bionlp-st-ge-2016-reference-eval

Id Subject Object Predicate Lexical cue
T7772 61-71 Positive_regulation denotes activation
T7773 81-94 Transcription denotes transcription
T7783 75-80 Protein denotes IRF-4
R6468 T7773 T7772 themeOf transcription,activation
R6474 T7783 T7773 themeOf IRF-4,transcription

events-check-again

Id Subject Object Predicate Lexical cue
T7710 61-71 Positive_regulation denotes activation
T7711 75-80 Protein denotes IRF-4
T7712 81-94 Transcription denotes transcription
R6435 T7711 T7712 themeOf IRF-4,transcription
R6436 T7712 T7710 themeOf transcription,activation

GO-CC

Id Subject Object Predicate Lexical cue
T7617 118-123 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T7009 0-183 Sentence denotes A 72 h AzadC-treatment resulted in a concentration-dependent activation of IRF-4 transcription in Jurkat and CML-T1 T-cells as well as in U-937, K-562 and EM-2 cell lines (Figure 2A).
T113 0-183 Sentence denotes A 72 h AzadC-treatment resulted in a concentration-dependent activation of IRF-4 transcription in Jurkat and CML-T1 T-cells as well as in U-937, K-562 and EM-2 cell lines (Figure 2A).

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T7108 0-1 DT denotes A
T7109 2-4 CD denotes 72
T7110 5-6 NN denotes h
T7111 7-22 NN denotes AzadC-treatment
T7112 23-31 VB denotes resulted
T7113 32-34 IN denotes in
T7114 35-36 DT denotes a
T7115 37-60 JJ denotes concentration-dependent
T7116 61-71 NN denotes activation
T7117 72-74 IN denotes of
T7118 75-80 NN denotes IRF-4
T7119 81-94 NN denotes transcription
T7120 95-97 IN denotes in
T7121 98-104 NN denotes Jurkat
T7122 105-108 CC denotes and
T7123 109-115 NN denotes CML-T1
T7124 116-123 NN denotes T-cells
T7125 124-126 RB denotes as
T7126 127-131 RB denotes well
T7127 132-134 IN denotes as
T7128 135-137 IN denotes in
T7129 138-143 NN denotes U-937
T7130 143-144 -COMMA- denotes ,
T7131 145-150 NN denotes K-562
T7132 151-154 CC denotes and
T7133 155-159 NN denotes EM-2
T7134 160-164 NN denotes cell
T7135 165-170 NN denotes lines
T7136 171-172 -LRB- denotes (
T7137 172-178 NN denotes Figure
T7138 179-181 NN denotes 2A
T7139 181-182 -RRB- denotes )
R5898 T7111 T7108 arg1Of AzadC-treatment,A
R5899 T7111 T7109 arg1Of AzadC-treatment,72
R5900 T7111 T7110 arg1Of AzadC-treatment,h
R5901 T7111 T7112 arg1Of AzadC-treatment,resulted
R5902 T7112 T7113 arg1Of resulted,in
R5903 T7112 T7128 arg1Of resulted,in
R5904 T7113 T7127 arg1Of in,as
R5905 T7116 T7113 arg2Of activation,in
R5906 T7116 T7114 arg1Of activation,a
R5907 T7116 T7115 arg1Of activation,concentration-dependent
R5908 T7116 T7117 arg1Of activation,of
R5909 T7116 T7120 arg1Of activation,in
R5910 T7119 T7117 arg2Of transcription,of
R5911 T7119 T7118 arg1Of transcription,IRF-4
R5912 T7121 T7122 arg1Of Jurkat,and
R5913 T7123 T7122 arg2Of CML-T1,and
R5914 T7124 T7120 arg2Of T-cells,in
R5915 T7124 T7121 arg1Of T-cells,Jurkat
R5916 T7124 T7123 arg1Of T-cells,CML-T1
R5917 T7127 T7125 arg1Of as,as
R5918 T7127 T7126 arg1Of as,well
R5919 T7128 T7127 arg2Of in,as
R5920 T7129 T7130 arg1Of U-937,","
R5921 T7130 T7132 arg1Of ",",and
R5922 T7131 T7130 arg2Of K-562,","
R5923 T7132 T7128 arg2Of and,in
R5924 T7135 T7132 arg2Of lines,and
R5925 T7135 T7133 arg1Of lines,EM-2
R5926 T7135 T7134 arg1Of lines,cell
R5927 T7135 T7136 arg1Of lines,(
R5928 T7138 T7136 arg2Of 2A,(
R5929 T7138 T7137 arg1Of 2A,Figure
R5930 T7139 T7136 arg3Of ),(

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T7402 0-1 DT denotes A
T7403 2-4 CD denotes 72
T7404 5-6 NN denotes h
T7405 7-22 NNP denotes AzadC-treatment
T7406 23-31 VBD denotes resulted
T7407 32-34 IN denotes in
T7408 35-36 DT denotes a
T7409 37-60 JJ denotes concentration-dependent
T7410 61-71 NN denotes activation
T7411 72-74 IN denotes of
T7412 75-80 NN denotes IRF-4
T7413 81-94 NN denotes transcription
T7414 95-97 IN denotes in
T7415 98-104 NNP denotes Jurkat
T7416 105-108 CC denotes and
T7417 109-115 NNP denotes CML-T1
T7418 116-123 NNS denotes T-cells
T7419 124-126 RB denotes as
T7420 127-131 RB denotes well
T7421 132-134 IN denotes as
T7422 135-137 IN denotes in
T7423 138-143 NNP denotes U-937
T7424 143-144 , denotes ,
T7425 145-150 NNP denotes K-562
T7426 151-154 CC denotes and
T7427 155-159 NNP denotes EM-2
T7428 160-164 NN denotes cell
T7429 165-170 NNS denotes lines
T7430 171-172 -LRB- denotes (
T7431 172-178 NN denotes Figure
T7432 179-181 NN denotes 2A
T7433 181-182 -RRB- denotes )
T7434 182-183 . denotes .
R6182 T7402 T7405 det A,AzadC-treatment
R6183 T7403 T7404 nummod 72,h
R6184 T7404 T7405 compound h,AzadC-treatment
R6185 T7405 T7406 nsubj AzadC-treatment,resulted
R6186 T7406 T7406 ROOT resulted,resulted
R6187 T7407 T7406 prep in,resulted
R6188 T7408 T7410 det a,activation
R6189 T7409 T7410 amod concentration-dependent,activation
R6190 T7410 T7407 pobj activation,in
R6191 T7411 T7410 prep of,activation
R6192 T7412 T7413 compound IRF-4,transcription
R6193 T7413 T7411 pobj transcription,of
R6194 T7414 T7413 prep in,transcription
R6195 T7415 T7414 pobj Jurkat,in
R6196 T7416 T7415 cc and,Jurkat
R6197 T7417 T7415 conj CML-T1,Jurkat
R6198 T7418 T7414 pobj T-cells,in
R6199 T7419 T7421 advmod as,as
R6200 T7420 T7421 advmod well,as
R6201 T7421 T7414 cc as,in
R6202 T7422 T7414 conj in,in
R6203 T7423 T7429 nmod U-937,lines
R6204 T7424 T7423 punct ",",U-937
R6205 T7425 T7423 conj K-562,U-937
R6206 T7426 T7425 cc and,K-562
R6207 T7427 T7425 conj EM-2,K-562
R6208 T7428 T7429 compound cell,lines
R6209 T7429 T7422 pobj lines,in
R6210 T7430 T7432 punct (,2A
R6211 T7431 T7432 compound Figure,2A
R6212 T7432 T7429 appos 2A,lines
R6213 T7433 T7432 punct ),2A
R6214 T7434 T7406 punct .,resulted

GO-BP

Id Subject Object Predicate Lexical cue
T7021 81-94 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T7739 75-80 Protein denotes IRF-4
T7740 81-94 Transcription denotes transcription
T7741 61-71 Positive_regulation denotes activation
R6452 T7739 T7740 themeOf IRF-4,transcription
R6453 T7740 T7741 themeOf transcription,activation

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T6982 61-71 Positive_regulation denotes activation
T6983 75-80 Protein denotes IRF-4
T6984 81-94 Transcription denotes transcription
R5801 T6983 T6984 themeOf IRF-4,transcription
R5802 T6984 T6982 themeOf transcription,activation

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T7306 75-80 Q15306 denotes IRF-4

test2

Id Subject Object Predicate Lexical cue Negation
T6950 61-71 Positive_regulation denotes activation
T6951 75-80 Protein denotes IRF-4
T6952 81-94 Transcription denotes transcription true
R5779 T6951 T6952 themeOf IRF-4,transcription
R5780 T6952 T6950 themeOf transcription,activation