PMC:1310901 / 13058-13138 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"http://pubannotation.org/docs/sourcedb/PMC/sourceid/1310901","sourcedb":"PMC","sourceid":"1310901","source_url":"http://www.ncbi.nlm.nih.gov/pmc/1310901","text":"Absence of IRF-4 expression in leukemia cells is not due to promoter alterations","tracks":[{"project":"bionlp-st-ge-2016-reference-eval","denotations":[{"id":"T6887","span":{"begin":0,"end":7},"obj":"Negative_regulation"},{"id":"T6894","span":{"begin":17,"end":27},"obj":"Gene_expression"},{"id":"T6895","span":{"begin":53,"end":56},"obj":"Positive_regulation"},{"id":"T6902","span":{"begin":11,"end":16},"obj":"Protein"}],"relations":[{"id":"R5743","pred":"themeOf","subj":"T6887","obj":"T6895"},{"id":"R5745","pred":"themeOf","subj":"T6894","obj":"T6887"},{"id":"R5747","pred":"themeOf","subj":"T6902","obj":"T6894"}],"attributes":[{"subj":"T6887","pred":"source","obj":"bionlp-st-ge-2016-reference-eval"},{"subj":"T6894","pred":"source","obj":"bionlp-st-ge-2016-reference-eval"},{"subj":"T6895","pred":"source","obj":"bionlp-st-ge-2016-reference-eval"},{"subj":"T6902","pred":"source","obj":"bionlp-st-ge-2016-reference-eval"}]},{"project":"events-check-again","denotations":[{"id":"T6817","span":{"begin":0,"end":7},"obj":"Negative_regulation"},{"id":"T6818","span":{"begin":11,"end":16},"obj":"Protein"},{"id":"T6819","span":{"begin":17,"end":27},"obj":"Gene_expression"},{"id":"T6820","span":{"begin":53,"end":56},"obj":"Positive_regulation"}],"relations":[{"id":"R5705","pred":"themeOf","subj":"T6817","obj":"T6820"},{"id":"R5706","pred":"themeOf","subj":"T6818","obj":"T6819"},{"id":"R5707","pred":"themeOf","subj":"T6819","obj":"T6817"}],"attributes":[{"id":"M143","pred":"Negation","subj":"T6820","obj":"true"},{"subj":"T6817","pred":"source","obj":"events-check-again"},{"subj":"T6818","pred":"source","obj":"events-check-again"},{"subj":"T6819","pred":"source","obj":"events-check-again"},{"subj":"T6820","pred":"source","obj":"events-check-again"}]},{"project":"GO-CC","denotations":[{"id":"T6720","span":{"begin":40,"end":45},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"attributes":[{"subj":"T6720","pred":"source","obj":"GO-CC"}]},{"project":"sentences","denotations":[{"id":"T6214","span":{"begin":0,"end":80},"obj":"Sentence"},{"id":"T101","span":{"begin":0,"end":80},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T6214","pred":"source","obj":"sentences"},{"subj":"T101","pred":"source","obj":"sentences"}]},{"project":"pmc-enju-pas","denotations":[{"id":"T6221","span":{"begin":0,"end":7},"obj":"NN"},{"id":"T6222","span":{"begin":8,"end":10},"obj":"IN"},{"id":"T6223","span":{"begin":11,"end":16},"obj":"NN"},{"id":"T6224","span":{"begin":17,"end":27},"obj":"NN"},{"id":"T6225","span":{"begin":28,"end":30},"obj":"IN"},{"id":"T6226","span":{"begin":31,"end":39},"obj":"NN"},{"id":"T6227","span":{"begin":40,"end":45},"obj":"NN"},{"id":"T6228","span":{"begin":46,"end":48},"obj":"VB"},{"id":"T6229","span":{"begin":49,"end":52},"obj":"RB"},{"id":"T6230","span":{"begin":53,"end":56},"obj":"JJ"},{"id":"T6231","span":{"begin":57,"end":59},"obj":"TO"},{"id":"T6232","span":{"begin":60,"end":68},"obj":"NN"},{"id":"T6233","span":{"begin":69,"end":80},"obj":"NN"}],"relations":[{"id":"R5176","pred":"arg1Of","subj":"T6221","obj":"T6222"},{"id":"R5177","pred":"arg1Of","subj":"T6221","obj":"T6228"},{"id":"R5178","pred":"arg1Of","subj":"T6221","obj":"T6230"},{"id":"R5179","pred":"arg2Of","subj":"T6224","obj":"T6222"},{"id":"R5180","pred":"arg1Of","subj":"T6224","obj":"T6223"},{"id":"R5181","pred":"arg1Of","subj":"T6224","obj":"T6225"},{"id":"R5182","pred":"arg2Of","subj":"T6227","obj":"T6225"},{"id":"R5183","pred":"arg1Of","subj":"T6227","obj":"T6226"},{"id":"R5184","pred":"arg1Of","subj":"T6228","obj":"T6229"},{"id":"R5185","pred":"arg2Of","subj":"T6230","obj":"T6228"},{"id":"R5186","pred":"arg1Of","subj":"T6230","obj":"T6231"},{"id":"R5187","pred":"arg2Of","subj":"T6233","obj":"T6231"},{"id":"R5188","pred":"arg1Of","subj":"T6233","obj":"T6232"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"attributes":[{"subj":"T6221","pred":"source","obj":"pmc-enju-pas"},{"subj":"T6222","pred":"source","obj":"pmc-enju-pas"},{"subj":"T6223","pred":"source","obj":"pmc-enju-pas"},{"subj":"T6224","pred":"source","obj":"pmc-enju-pas"},{"subj":"T6225","pred":"source","obj":"pmc-enju-pas"},{"subj":"T6226","pred":"source","obj":"pmc-enju-pas"},{"subj":"T6227","pred":"source","obj":"pmc-enju-pas"},{"subj":"T6228","pred":"source","obj":"pmc-enju-pas"},{"subj":"T6229","pred":"source","obj":"pmc-enju-pas"},{"subj":"T6230","pred":"source","obj":"pmc-enju-pas"},{"subj":"T6231","pred":"source","obj":"pmc-enju-pas"},{"subj":"T6232","pred":"source","obj":"pmc-enju-pas"},{"subj":"T6233","pred":"source","obj":"pmc-enju-pas"}]},{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T6468","span":{"begin":0,"end":7},"obj":"NN"},{"id":"T6469","span":{"begin":8,"end":10},"obj":"IN"},{"id":"T6470","span":{"begin":11,"end":16},"obj":"NN"},{"id":"T6471","span":{"begin":17,"end":27},"obj":"NN"},{"id":"T6472","span":{"begin":28,"end":30},"obj":"IN"},{"id":"T6473","span":{"begin":31,"end":39},"obj":"NN"},{"id":"T6474","span":{"begin":40,"end":45},"obj":"NNS"},{"id":"T6475","span":{"begin":46,"end":48},"obj":"VBZ"},{"id":"T6476","span":{"begin":49,"end":52},"obj":"RB"},{"id":"T6477","span":{"begin":53,"end":56},"obj":"JJ"},{"id":"T6478","span":{"begin":57,"end":59},"obj":"TO"},{"id":"T6479","span":{"begin":60,"end":68},"obj":"NN"},{"id":"T6480","span":{"begin":69,"end":80},"obj":"NNS"}],"relations":[{"id":"R5410","pred":"nsubj","subj":"T6468","obj":"T6475"},{"id":"R5411","pred":"prep","subj":"T6469","obj":"T6468"},{"id":"R5412","pred":"compound","subj":"T6470","obj":"T6471"},{"id":"R5413","pred":"pobj","subj":"T6471","obj":"T6469"},{"id":"R5414","pred":"prep","subj":"T6472","obj":"T6468"},{"id":"R5415","pred":"compound","subj":"T6473","obj":"T6474"},{"id":"R5416","pred":"pobj","subj":"T6474","obj":"T6472"},{"id":"R5417","pred":"ROOT","subj":"T6475","obj":"T6475"},{"id":"R5418","pred":"neg","subj":"T6476","obj":"T6475"},{"id":"R5419","pred":"acomp","subj":"T6477","obj":"T6475"},{"id":"R5420","pred":"aux","subj":"T6478","obj":"T6479"},{"id":"R5421","pred":"xcomp","subj":"T6479","obj":"T6477"},{"id":"R5422","pred":"conj","subj":"T6480","obj":"T6475"}],"attributes":[{"subj":"T6468","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T6469","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T6470","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T6471","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T6472","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T6473","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T6474","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T6475","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T6476","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T6477","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T6478","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T6479","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T6480","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"}]},{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T6847","span":{"begin":11,"end":16},"obj":"Protein"},{"id":"T6848","span":{"begin":17,"end":27},"obj":"Gene_expression"},{"id":"T6849","span":{"begin":0,"end":7},"obj":"Negative_regulation"},{"id":"T6850","span":{"begin":53,"end":56},"obj":"Positive_regulation"}],"relations":[{"id":"R5722","pred":"themeOf","subj":"T6847","obj":"T6848"},{"id":"R5723","pred":"themeOf","subj":"T6848","obj":"T6849"},{"id":"R5724","pred":"themeOf","subj":"T6849","obj":"T6850"}],"attributes":[{"subj":"T6847","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T6848","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T6849","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T6850","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"}]},{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T6184","span":{"begin":0,"end":7},"obj":"Negative_regulation"},{"id":"T6185","span":{"begin":11,"end":16},"obj":"Protein"},{"id":"T6186","span":{"begin":17,"end":27},"obj":"Gene_expression"},{"id":"T6187","span":{"begin":53,"end":56},"obj":"Positive_regulation"}],"relations":[{"id":"R5159","pred":"themeOf","subj":"T6184","obj":"T6187"},{"id":"R5160","pred":"themeOf","subj":"T6185","obj":"T6186"},{"id":"R5161","pred":"themeOf","subj":"T6186","obj":"T6184"}],"attributes":[{"id":"M123","pred":"Negation","subj":"T6187","obj":"true"},{"subj":"T6184","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T6185","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T6186","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T6187","pred":"source","obj":"bionlp-st-ge-2016-reference"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}]},{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T6450","span":{"begin":11,"end":16},"obj":"Q15306"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"attributes":[{"subj":"T6450","pred":"source","obj":"bionlp-st-ge-2016-uniprot"}]},{"project":"test2","denotations":[{"id":"T6152","span":{"begin":0,"end":7},"obj":"Negative_regulation"},{"id":"T6153","span":{"begin":11,"end":16},"obj":"Protein"},{"id":"T6154","span":{"begin":17,"end":27},"obj":"Gene_expression"},{"id":"T6155","span":{"begin":53,"end":56},"obj":"Positive_regulation"}],"relations":[{"id":"R5140","pred":"themeOf","subj":"T6152","obj":"T6155"},{"id":"R5141","pred":"themeOf","subj":"T6153","obj":"T6154"},{"id":"R5142","pred":"themeOf","subj":"T6154","obj":"T6152"},{"id":"R5143","pred":"themeOf","subj":"T6154","obj":"T6155"}],"attributes":[{"id":"M118","pred":"Negation","subj":"T6154","obj":"true"},{"subj":"T6152","pred":"source","obj":"test2"},{"subj":"T6153","pred":"source","obj":"test2"},{"subj":"T6154","pred":"source","obj":"test2"},{"subj":"T6155","pred":"source","obj":"test2"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"bionlp-st-ge-2016-reference-eval","color":"#ecb093","default":true},{"id":"events-check-again","color":"#9693ec"},{"id":"GO-CC","color":"#a9ec93"},{"id":"sentences","color":"#ec93c3"},{"id":"pmc-enju-pas","color":"#93ddec"},{"id":"bionlp-st-ge-2016-spacy-parsed","color":"#ece193"},{"id":"bionlp-st-ge-2016-reference-tees","color":"#c693ec"},{"id":"bionlp-st-ge-2016-reference","color":"#93ecac"},{"id":"bionlp-st-ge-2016-uniprot","color":"#ec9393"},{"id":"test2","color":"#93adec"}]}]}}