PMC:1310901 / 1177-1316 JSONTXT

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    bionlp-st-ge-2016-reference-eval

    {"project":"bionlp-st-ge-2016-reference-eval","denotations":[{"id":"T890","span":{"begin":16,"end":24},"obj":"Positive_regulation"},{"id":"T891","span":{"begin":28,"end":33},"obj":"Protein"}],"relations":[{"id":"R642","pred":"themeOf","subj":"T891","obj":"T890"}],"text":"ation-dependent increase of IRF-4 mRNA and protein levels. Second, using a restriction-PCR-assay and bisulfite-sequencing we identified spe"}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T826","span":{"begin":16,"end":24},"obj":"Positive_regulation"},{"id":"T827","span":{"begin":28,"end":33},"obj":"Protein"}],"relations":[{"id":"R609","pred":"themeOf","subj":"T827","obj":"T826"}],"text":"ation-dependent increase of IRF-4 mRNA and protein levels. Second, using a restriction-PCR-assay and bisulfite-sequencing we identified spe"}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T303","span":{"begin":16,"end":24},"obj":"NN"},{"id":"T304","span":{"begin":25,"end":27},"obj":"IN"},{"id":"T305","span":{"begin":28,"end":33},"obj":"NN"},{"id":"T306","span":{"begin":34,"end":38},"obj":"NN"},{"id":"T307","span":{"begin":39,"end":42},"obj":"CC"},{"id":"T308","span":{"begin":43,"end":50},"obj":"NN"},{"id":"T309","span":{"begin":51,"end":57},"obj":"NN"},{"id":"T310","span":{"begin":59,"end":65},"obj":"RB"},{"id":"T311","span":{"begin":65,"end":66},"obj":"-COMMA-"},{"id":"T312","span":{"begin":67,"end":72},"obj":"VB"},{"id":"T313","span":{"begin":73,"end":74},"obj":"DT"},{"id":"T314","span":{"begin":75,"end":96},"obj":"NN"},{"id":"T315","span":{"begin":97,"end":100},"obj":"CC"},{"id":"T316","span":{"begin":101,"end":121},"obj":"NN"},{"id":"T317","span":{"begin":122,"end":124},"obj":"PRP"},{"id":"T318","span":{"begin":125,"end":135},"obj":"VB"}],"relations":[{"id":"R224","pred":"arg1Of","subj":"T303","obj":"T304"},{"id":"R225","pred":"arg1Of","subj":"T306","obj":"T307"},{"id":"R226","pred":"arg2Of","subj":"T308","obj":"T307"},{"id":"R227","pred":"arg2Of","subj":"T309","obj":"T304"},{"id":"R228","pred":"arg1Of","subj":"T309","obj":"T305"},{"id":"R229","pred":"arg1Of","subj":"T309","obj":"T306"},{"id":"R230","pred":"arg1Of","subj":"T309","obj":"T308"},{"id":"R231","pred":"arg1Of","subj":"T314","obj":"T315"},{"id":"R232","pred":"arg2Of","subj":"T315","obj":"T312"},{"id":"R233","pred":"arg1Of","subj":"T315","obj":"T313"},{"id":"R234","pred":"arg2Of","subj":"T316","obj":"T315"},{"id":"R235","pred":"arg1Of","subj":"T317","obj":"T312"},{"id":"R236","pred":"arg1Of","subj":"T317","obj":"T318"},{"id":"R237","pred":"arg1Of","subj":"T318","obj":"T310"},{"id":"R238","pred":"arg1Of","subj":"T318","obj":"T311"},{"id":"R239","pred":"modOf","subj":"T318","obj":"T312"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"ation-dependent increase of IRF-4 mRNA and protein levels. Second, using a restriction-PCR-assay and bisulfite-sequencing we identified spe"}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T599","span":{"begin":16,"end":24},"obj":"NN"},{"id":"T600","span":{"begin":25,"end":27},"obj":"IN"},{"id":"T601","span":{"begin":28,"end":33},"obj":"NNP"},{"id":"T602","span":{"begin":34,"end":38},"obj":"NNP"},{"id":"T603","span":{"begin":39,"end":42},"obj":"CC"},{"id":"T604","span":{"begin":43,"end":50},"obj":"NN"},{"id":"T605","span":{"begin":51,"end":57},"obj":"NNS"},{"id":"T606","span":{"begin":57,"end":58},"obj":"."},{"id":"T607","span":{"begin":59,"end":65},"obj":"NNP"},{"id":"T608","span":{"begin":65,"end":66},"obj":","},{"id":"T609","span":{"begin":67,"end":72},"obj":"VBG"},{"id":"T610","span":{"begin":73,"end":74},"obj":"DT"},{"id":"T611","span":{"begin":75,"end":96},"obj":"JJ"},{"id":"T612","span":{"begin":97,"end":100},"obj":"CC"},{"id":"T613","span":{"begin":101,"end":121},"obj":"JJ"},{"id":"T614","span":{"begin":122,"end":124},"obj":"PRP"},{"id":"T615","span":{"begin":125,"end":135},"obj":"VBD"}],"relations":[{"id":"R488","pred":"nmod","subj":"T599","obj":"T605"},{"id":"R489","pred":"prep","subj":"T600","obj":"T599"},{"id":"R490","pred":"compound","subj":"T601","obj":"T602"},{"id":"R491","pred":"pobj","subj":"T602","obj":"T600"},{"id":"R492","pred":"cc","subj":"T603","obj":"T599"},{"id":"R493","pred":"compound","subj":"T604","obj":"T605"},{"id":"R496","pred":"advmod","subj":"T607","obj":"T615"},{"id":"R497","pred":"punct","subj":"T608","obj":"T615"},{"id":"R498","pred":"advcl","subj":"T609","obj":"T615"},{"id":"R499","pred":"npadvmod","subj":"T610","obj":"T615"},{"id":"R500","pred":"npadvmod","subj":"T611","obj":"T615"},{"id":"R501","pred":"cc","subj":"T612","obj":"T611"},{"id":"R502","pred":"conj","subj":"T613","obj":"T611"},{"id":"R503","pred":"nsubj","subj":"T614","obj":"T615"},{"id":"R504","pred":"ROOT","subj":"T615","obj":"T615"}],"text":"ation-dependent increase of IRF-4 mRNA and protein levels. Second, using a restriction-PCR-assay and bisulfite-sequencing we identified spe"}

    bionlp-st-ge-2016-reference-tees

    {"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T858","span":{"begin":28,"end":38},"obj":"Protein"},{"id":"T859","span":{"begin":16,"end":24},"obj":"Positive_regulation"}],"relations":[{"id":"R625","pred":"themeOf","subj":"T858","obj":"T859"}],"text":"ation-dependent increase of IRF-4 mRNA and protein levels. Second, using a restriction-PCR-assay and bisulfite-sequencing we identified spe"}

    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T93","span":{"begin":16,"end":24},"obj":"Positive_regulation"},{"id":"T94","span":{"begin":28,"end":33},"obj":"Protein"}],"relations":[{"id":"R660","pred":"themeOf","subj":"T94","obj":"T93"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"ation-dependent increase of IRF-4 mRNA and protein levels. Second, using a restriction-PCR-assay and bisulfite-sequencing we identified spe"}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T407","span":{"begin":28,"end":33},"obj":"Q15306"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"ation-dependent increase of IRF-4 mRNA and protein levels. Second, using a restriction-PCR-assay and bisulfite-sequencing we identified spe"}

    test2

    {"project":"test2","denotations":[{"id":"T56","span":{"begin":6,"end":15},"obj":"Regulation"},{"id":"T57","span":{"begin":16,"end":24},"obj":"Positive_regulation"},{"id":"T58","span":{"begin":28,"end":33},"obj":"Protein"}],"relations":[{"id":"R30","pred":"themeOf","subj":"T57","obj":"T56"},{"id":"R31","pred":"themeOf","subj":"T58","obj":"T57"}],"text":"ation-dependent increase of IRF-4 mRNA and protein levels. Second, using a restriction-PCR-assay and bisulfite-sequencing we identified spe"}