> top > docs > PMC:1310901 > spans > 11-267 > annotations

PMC:1310901 / 11-267 JSONTXT

Annnotations TAB JSON ListView MergeView

bionlp-st-ge-2016-reference-eval

Id Subject Object Predicate Lexical cue
T869 8-38 Protein denotes interferon regulatory factor 4
T870 44-54 Gene_expression denotes expression
T871 158-161 Protein denotes bcr
T872 162-165 Protein denotes abl
R630 T869 T870 themeOf interferon regulatory factor 4,expression

events-check-again

Id Subject Object Predicate Lexical cue
T805 8-38 Protein denotes interferon regulatory factor 4
T806 44-54 Gene_expression denotes expression
T807 158-161 Protein denotes bcr
T808 162-165 Protein denotes abl
R692 T805 T806 themeOf interferon regulatory factor 4,expression

GO-CC

Id Subject Object Predicate Lexical cue
T698 67-72 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T2 136-144 Sentence denotes Abstract

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T130 5-7 IN denotes of
T131 8-18 NN denotes interferon
T132 19-29 JJ denotes regulatory
T133 30-36 NN denotes factor
T134 37-38 CD denotes 4
T135 39-43 NN denotes gene
T136 44-54 NN denotes expression
T137 55-57 IN denotes in
T138 58-66 JJ denotes leukemic
T139 67-72 NN denotes cells
T140 73-76 JJ denotes due
T141 77-79 TO denotes to
T142 80-96 NN denotes hypermethylation
T143 97-99 IN denotes of
T144 100-103 NN denotes CpG
T145 104-110 NN denotes motifs
T146 111-113 IN denotes in
T147 114-117 DT denotes the
T148 118-126 NN denotes promoter
T149 127-133 NN denotes region
T150 145-153 IN denotes Although
T151 154-157 DT denotes the
T152 158-165 NN denotes bcr-abl
T153 166-179 NN denotes translocation
T154 180-183 VB denotes has
T155 184-188 VB denotes been
T156 189-194 VB denotes shown
T157 195-197 TO denotes to
T158 198-200 VB denotes be
T159 201-204 DT denotes the
T160 205-214 JJ denotes causative
T161 215-222 JJ denotes genetic
T162 223-233 NN denotes aberration
T163 234-236 IN denotes in
T164 237-244 JJ denotes chronic
T165 245-252 JJ denotes myeloid
R43 T136 T130 arg2Of expression,of
R44 T136 T131 arg1Of expression,interferon
R45 T136 T132 arg1Of expression,regulatory
R46 T136 T133 arg1Of expression,factor
R47 T136 T134 arg1Of expression,4
R48 T136 T135 arg1Of expression,gene
R49 T139 T137 arg2Of cells,in
R50 T139 T138 arg1Of cells,leukemic
R51 T139 T140 arg1Of cells,due
R52 T140 T141 arg1Of due,to
R53 T142 T141 arg2Of hypermethylation,to
R54 T142 T143 arg1Of hypermethylation,of
R55 T145 T143 arg2Of motifs,of
R56 T145 T144 arg1Of motifs,CpG
R57 T145 T146 arg1Of motifs,in
R58 T149 T146 arg2Of region,in
R59 T149 T147 arg1Of region,the
R60 T149 T148 arg1Of region,promoter
R61 T153 T151 arg1Of translocation,the
R62 T153 T152 arg1Of translocation,bcr-abl
R63 T153 T154 arg1Of translocation,has
R64 T153 T155 arg1Of translocation,been
R65 T153 T156 arg2Of translocation,shown
R66 T153 T158 arg1Of translocation,be
R67 T156 T150 arg2Of shown,Although
R68 T156 T154 arg2Of shown,has
R69 T156 T155 arg2Of shown,been
R70 T158 T156 arg3Of be,shown
R71 T158 T157 arg1Of be,to
R72 T158 T163 arg1Of be,in
R73 T162 T158 arg2Of aberration,be
R74 T162 T159 arg1Of aberration,the
R75 T162 T160 arg1Of aberration,causative
R76 T162 T161 arg1Of aberration,genetic

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T421 5-7 IN denotes of
T422 8-18 NN denotes interferon
T423 19-29 JJ denotes regulatory
T424 30-36 NN denotes factor
T425 37-38 CD denotes 4
T426 39-43 NN denotes gene
T427 44-54 NN denotes expression
T428 55-57 IN denotes in
T429 58-66 JJ denotes leukemic
T430 67-72 NNS denotes cells
T431 73-76 JJ denotes due
T432 77-79 TO denotes to
T433 80-96 NN denotes hypermethylation
T434 97-99 IN denotes of
T435 100-103 NNP denotes CpG
T436 104-110 NNS denotes motifs
T437 111-113 IN denotes in
T438 114-117 DT denotes the
T439 118-126 NN denotes promoter
T440 127-133 NN denotes region
T441 145-153 IN denotes Although
T442 154-157 DT denotes the
T443 158-165 JJ denotes bcr-abl
T444 166-179 NN denotes translocation
T445 180-183 VBZ denotes has
T446 184-188 VBN denotes been
T447 189-194 VBN denotes shown
T448 195-197 TO denotes to
T449 198-200 VB denotes be
T450 201-204 DT denotes the
T451 205-214 JJ denotes causative
T452 215-222 JJ denotes genetic
T453 223-233 NN denotes aberration
T454 234-236 IN denotes in
T455 237-244 JJ denotes chronic
T456 245-252 JJ denotes myeloid
R343 T454 T453 prep in,aberration
R326 T437 T433 prep in,hypermethylation
R327 T438 T440 det the,region
R328 T439 T440 compound promoter,region
R329 T440 T437 pobj region,in
R330 T441 T447 mark Although,shown
R331 T442 T444 det the,translocation
R332 T443 T444 amod bcr-abl,translocation
R333 T444 T447 nsubjpass translocation,shown
R334 T445 T447 aux has,shown
R335 T446 T447 auxpass been,shown
R337 T448 T449 aux to,be
R338 T449 T447 xcomp be,shown
R339 T450 T453 det the,aberration
R340 T451 T453 amod causative,aberration
R341 T452 T453 amod genetic,aberration
R342 T453 T449 attr aberration,be
R318 T429 T430 amod leukemic,cells
R319 T430 T428 pobj cells,in
R321 T432 T431 pcomp to,due
R322 T433 T432 pobj hypermethylation,to
R323 T434 T433 prep of,hypermethylation
R324 T435 T436 compound CpG,motifs
R325 T436 T434 pobj motifs,of
R311 T422 T424 nmod interferon,factor
R312 T423 T424 amod regulatory,factor
R313 T424 T421 pobj factor,of
R314 T425 T427 nummod 4,expression
R315 T426 T427 compound gene,expression
R317 T428 T427 prep in,expression

GO-BP

Id Subject Object Predicate Lexical cue
T117 39-54 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T838 8-43 Protein denotes interferon regulatory factor 4 gene
T839 44-54 Gene_expression denotes expression
T841 158-161 Protein denotes bcr
T842 162-165 Protein denotes abl
R615 T838 T839 themeOf interferon regulatory factor 4 gene,expression

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T72 8-38 Protein denotes interferon regulatory factor 4
T73 44-54 Gene_expression denotes expression
T74 158-161 Protein denotes bcr
T75 162-165 Protein denotes abl
R648 T72 T73 themeOf interferon regulatory factor 4,expression

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T388 8-38 Q02556 denotes interferon regulatory factor 4
T389 8-38 Q14653 denotes interferon regulatory factor 4
T390 8-38 Q92985 denotes interferon regulatory factor 4
T391 8-38 Q15306 denotes interferon regulatory factor 4
T392 8-38 Q13568 denotes interferon regulatory factor 4
T393 158-161 P11274 denotes bcr
T394 162-165 P00519 denotes abl

test2

Id Subject Object Predicate Lexical cue Negation Speculation
T36 8-38 Protein denotes interferon regulatory factor 4
T37 44-54 Gene_expression denotes expression true
T38 158-161 Protein denotes bcr true
T39 162-165 Protein denotes abl
T40 166-179 Localization denotes translocation
R19 T36 T37 themeOf interferon regulatory factor 4,expression
R21 T38 T40 themeOf bcr,translocation