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PMC:1310901 / 10610-10932 JSONTXT

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sentences

Id Subject Object Predicate Lexical cue
T4936 0-322 Sentence denotes Fresh solutions of 30 µl of 10 mM hydrochinon (Sigma) and 530 µl of 3 M sodium bisulfite (pH 5.0; Sigma) were added, the solution was gently mixed, overlayed with mineral oil and incubated in the dark for 12–13 h at 50°C. The aqueous phase was recovered using the ‘Wizard DNA clean-up system’ (Promega, Mannheim, Germany).
T83 0-221 Sentence denotes Fresh solutions of 30 µl of 10 mM hydrochinon (Sigma) and 530 µl of 3 M sodium bisulfite (pH 5.0; Sigma) were added, the solution was gently mixed, overlayed with mineral oil and incubated in the dark for 12–13 h at 50°C.
T84 222-322 Sentence denotes The aqueous phase was recovered using the ‘Wizard DNA clean-up system’ (Promega, Mannheim, Germany).

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T5021 0-5 JJ denotes Fresh
T5022 6-15 NN denotes solutions
T5023 16-18 IN denotes of
T5024 19-21 CD denotes 30
T5025 22-24 NN denotes µl
T5026 25-27 IN denotes of
T5027 28-30 CD denotes 10
T5028 31-33 NN denotes mM
T5029 34-45 NN denotes hydrochinon
T5030 46-47 -LRB- denotes (
T5031 47-52 NN denotes Sigma
T5032 52-53 -RRB- denotes )
T5033 54-57 CC denotes and
T5034 58-61 CD denotes 530
T5035 62-64 NN denotes µl
T5036 65-67 IN denotes of
T5037 68-69 CD denotes 3
T5038 70-71 NN denotes M
T5039 72-78 NN denotes sodium
T5040 79-88 NN denotes bisulfite
T5041 89-90 -LRB- denotes (
T5042 90-92 NN denotes pH
T5043 93-96 CD denotes 5.0
T5044 96-97 -COLON- denotes ;
T5045 98-103 NNP denotes Sigma
T5046 103-104 -RRB- denotes )
T5047 105-109 VB denotes were
T5048 110-115 VB denotes added
T5049 115-116 -COMMA- denotes ,
T5050 117-120 DT denotes the
T5051 121-129 NN denotes solution
T5052 130-133 VB denotes was
T5053 134-140 RB denotes gently
T5054 141-146 VB denotes mixed
T5055 146-147 -COMMA- denotes ,
T5056 148-157 VB denotes overlayed
T5057 158-162 IN denotes with
T5058 163-170 NN denotes mineral
T5059 171-174 NN denotes oil
T5060 175-178 CC denotes and
T5061 179-188 VB denotes incubated
T5062 189-191 IN denotes in
T5063 192-195 DT denotes the
T5064 196-200 NN denotes dark
T5065 201-204 IN denotes for
T5066 205-210 CD denotes 12–13
T5067 211-212 NN denotes h
T5068 213-215 IN denotes at
T5069 216-221 NNP denotes 50°C.
T5070 222-225 DT denotes The
T5071 226-233 JJ denotes aqueous
T5072 234-239 NN denotes phase
T5073 240-243 VB denotes was
T5074 244-253 VB denotes recovered
T5075 254-259 VB denotes using
T5076 260-263 DT denotes the
T5077 264-271 NNP denotes ‘Wizard
T5078 272-275 NN denotes DNA
T5079 276-284 NN denotes clean-up
T5080 285-292 NN denotes system’
T5081 293-294 -LRB- denotes (
T5082 294-301 NNP denotes Promega
T5083 301-302 -COMMA- denotes ,
T5084 303-311 NNP denotes Mannheim
T5085 311-312 -COMMA- denotes ,
T5086 313-320 NNP denotes Germany
T5087 320-321 -RRB- denotes )
R4134 T5022 T5021 arg1Of solutions,Fresh
R4135 T5022 T5023 arg1Of solutions,of
R4136 T5022 T5047 arg1Of solutions,were
R4137 T5022 T5048 arg2Of solutions,added
R4138 T5025 T5024 arg1Of µl,30
R4139 T5025 T5026 arg1Of µl,of
R4140 T5025 T5033 arg1Of µl,and
R4141 T5027 T5028 arg1Of 10,mM
R4142 T5029 T5026 arg2Of hydrochinon,of
R4143 T5029 T5027 arg1Of hydrochinon,10
R4144 T5029 T5030 arg1Of hydrochinon,(
R4145 T5031 T5030 arg2Of Sigma,(
R4146 T5032 T5030 arg3Of ),(
R4147 T5033 T5023 arg2Of and,of
R4148 T5035 T5033 arg2Of µl,and
R4149 T5035 T5034 arg1Of µl,530
R4150 T5035 T5036 arg1Of µl,of
R4151 T5037 T5038 arg1Of 3,M
R4152 T5040 T5036 arg2Of bisulfite,of
R4153 T5040 T5037 arg1Of bisulfite,3
R4154 T5040 T5039 arg1Of bisulfite,sodium
R4155 T5040 T5041 arg1Of bisulfite,(
R4156 T5042 T5041 arg2Of pH,(
R4157 T5042 T5043 arg1Of pH,5.0
R4158 T5042 T5044 arg1Of pH,;
R4159 T5045 T5044 arg2Of Sigma,;
R4160 T5046 T5041 arg3Of ),(
R4161 T5048 T5047 arg2Of added,were
R4162 T5051 T5050 arg1Of solution,the
R4163 T5051 T5052 arg1Of solution,was
R4164 T5051 T5054 arg2Of solution,mixed
R4165 T5051 T5056 arg2Of solution,overlayed
R4166 T5051 T5061 arg2Of solution,incubated
R4167 T5054 T5055 arg1Of mixed,","
R4168 T5055 T5060 arg1Of ",",and
R4169 T5056 T5055 arg2Of overlayed,","
R4170 T5056 T5057 arg1Of overlayed,with
R4171 T5059 T5057 arg2Of oil,with
R4172 T5059 T5058 arg1Of oil,mineral
R4173 T5060 T5049 arg1Of and,","
R4174 T5060 T5052 arg2Of and,was
R4175 T5060 T5053 arg1Of and,gently
R4176 T5061 T5060 arg2Of incubated,and
R4177 T5061 T5062 arg1Of incubated,in
R4178 T5064 T5062 arg2Of dark,in
R4179 T5064 T5063 arg1Of dark,the
R4180 T5067 T5066 arg1Of h,12–13
R4181 T5067 T5068 arg1Of h,at
R4182 T5067 T5073 arg1Of h,was
R4183 T5067 T5074 arg2Of h,recovered
R4184 T5072 T5068 arg2Of phase,at
R4185 T5072 T5069 arg1Of phase,50°C.
R4186 T5072 T5070 arg1Of phase,The
R4187 T5072 T5071 arg1Of phase,aqueous
R4188 T5074 T5073 arg2Of recovered,was
R4189 T5074 T5075 modOf recovered,using
R4190 T5074 T5081 arg1Of recovered,(
R4191 T5080 T5075 arg2Of system’,using
R4192 T5080 T5076 arg1Of system’,the
R4193 T5080 T5077 arg1Of system’,‘Wizard
R4194 T5080 T5078 arg1Of system’,DNA
R4195 T5080 T5079 arg1Of system’,clean-up
R4196 T5082 T5083 arg1Of Promega,","
R4197 T5083 T5081 arg2Of ",",(
R4198 T5083 T5085 arg1Of ",",","
R4199 T5084 T5083 arg2Of Mannheim,","
R4200 T5086 T5085 arg2Of Germany,","
R4201 T5087 T5081 arg3Of ),(

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T5357 0-5 JJ denotes Fresh
T5358 6-15 NNS denotes solutions
T5359 16-18 IN denotes of
T5360 19-21 CD denotes 30
T5361 22-24 NN denotes µl
T5362 25-27 IN denotes of
T5363 28-30 CD denotes 10
T5364 31-33 NN denotes mM
T5365 34-45 NN denotes hydrochinon
T5366 46-47 -LRB- denotes (
T5367 47-52 NNP denotes Sigma
T5368 52-53 -RRB- denotes )
T5369 54-57 CC denotes and
T5370 58-61 CD denotes 530
T5371 62-64 NN denotes µl
T5372 65-67 IN denotes of
T5373 68-69 CD denotes 3
T5374 70-71 NNP denotes M
T5375 72-78 NN denotes sodium
T5376 79-88 NN denotes bisulfite
T5377 89-90 -LRB- denotes (
T5378 90-92 NNP denotes pH
T5379 93-96 CD denotes 5.0
T5380 96-97 : denotes ;
T5381 98-103 NNP denotes Sigma
T5382 103-104 -RRB- denotes )
T5383 105-109 VBD denotes were
T5384 110-115 VBN denotes added
T5385 115-116 , denotes ,
T5386 117-120 DT denotes the
T5387 121-129 NN denotes solution
T5388 130-133 VBD denotes was
T5389 134-140 RB denotes gently
T5390 141-146 JJ denotes mixed
T5391 146-147 , denotes ,
T5392 148-157 VBN denotes overlayed
T5393 158-162 IN denotes with
T5394 163-170 NN denotes mineral
T5395 171-174 NN denotes oil
T5396 175-178 CC denotes and
T5397 179-188 VBN denotes incubated
T5398 189-191 IN denotes in
T5399 192-195 DT denotes the
T5400 196-200 NN denotes dark
T5401 201-204 IN denotes for
T5402 205-207 CD denotes 12
T5403 208-210 CD denotes 13
T5404 211-212 NN denotes h
T5405 213-215 IN denotes at
T5406 216-218 CD denotes 50
T5407 218-219 CD denotes °
T5408 219-220 NNP denotes C
T5409 220-221 . denotes .
T5410 222-225 DT denotes The
T5411 226-233 JJ denotes aqueous
T5412 234-239 NN denotes phase
T5413 240-243 VBD denotes was
T5414 244-253 VBN denotes recovered
T5415 254-259 VBG denotes using
T5416 260-263 DT denotes the
T5417 265-271 NNP denotes Wizard
T5418 272-275 NNP denotes DNA
T5419 276-284 JJ denotes clean-up
T5420 285-291 NN denotes system
T5421 293-294 -LRB- denotes (
T5422 294-301 NNP denotes Promega
T5423 301-302 , denotes ,
T5424 303-311 NNP denotes Mannheim
T5425 311-312 , denotes ,
T5426 313-320 NNP denotes Germany
T5427 320-321 -RRB- denotes )
T5428 321-322 . denotes .
R4471 T5357 T5358 amod Fresh,solutions
R4472 T5358 T5384 nsubjpass solutions,added
R4473 T5359 T5358 prep of,solutions
R4474 T5360 T5361 nummod 30,µl
R4475 T5361 T5359 pobj µl,of
R4476 T5362 T5361 prep of,µl
R4477 T5363 T5365 nummod 10,hydrochinon
R4478 T5364 T5365 compound mM,hydrochinon
R4479 T5365 T5362 pobj hydrochinon,of
R4480 T5366 T5367 punct (,Sigma
R4481 T5367 T5365 appos Sigma,hydrochinon
R4482 T5368 T5367 punct ),Sigma
R4483 T5369 T5365 cc and,hydrochinon
R4484 T5370 T5371 nummod 530,µl
R4485 T5371 T5361 appos µl,µl
R4486 T5372 T5371 prep of,µl
R4487 T5373 T5376 nummod 3,bisulfite
R4488 T5374 T5375 compound M,sodium
R4489 T5375 T5376 compound sodium,bisulfite
R4490 T5376 T5372 pobj bisulfite,of
R4491 T5377 T5376 punct (,bisulfite
R4492 T5378 T5376 appos pH,bisulfite
R4493 T5379 T5378 nummod 5.0,pH
R4494 T5380 T5358 punct ;,solutions
R4495 T5381 T5358 appos Sigma,solutions
R4496 T5382 T5358 punct ),solutions
R4497 T5383 T5384 auxpass were,added
R4498 T5384 T5384 ROOT added,added
R4499 T5385 T5384 punct ",",added
R4500 T5386 T5387 det the,solution
R4501 T5387 T5388 nsubj solution,was
R4502 T5388 T5384 conj was,added
R4503 T5389 T5390 advmod gently,mixed
R4504 T5390 T5388 acomp mixed,was
R4505 T5391 T5388 punct ",",was
R4506 T5392 T5388 prep overlayed,was
R4507 T5393 T5392 prep with,overlayed
R4508 T5394 T5395 compound mineral,oil
R4509 T5395 T5393 pobj oil,with
R4510 T5396 T5392 cc and,overlayed
R4511 T5397 T5392 conj incubated,overlayed
R4512 T5398 T5397 prep in,incubated
R4513 T5399 T5400 det the,dark
R4514 T5400 T5398 pobj dark,in
R4515 T5401 T5397 prep for,incubated
R4516 T5402 T5401 pobj 12,for
R4517 T5403 T5404 nummod 13,h
R4518 T5404 T5402 appos h,12
R4519 T5405 T5404 prep at,h
R4520 T5406 T5407 nummod 50,°
R4521 T5407 T5405 pobj °,at
R4522 T5408 T5404 npadvmod C,h
R4523 T5409 T5388 punct .,was
R4524 T5410 T5412 det The,phase
R4525 T5411 T5412 amod aqueous,phase
R4526 T5412 T5414 nsubjpass phase,recovered
R4527 T5413 T5414 auxpass was,recovered
R4528 T5414 T5414 ROOT recovered,recovered
R4529 T5415 T5414 advcl using,recovered
R4530 T5416 T5420 det the,system
R4531 T5417 T5420 compound Wizard,system
R4532 T5418 T5420 compound DNA,system
R4533 T5419 T5420 compound clean-up,system
R4534 T5420 T5415 dobj system,using
R4535 T5421 T5420 punct (,system
R4536 T5422 T5420 appos Promega,system
R4537 T5423 T5422 punct ",",Promega
R4538 T5424 T5422 conj Mannheim,Promega
R4539 T5425 T5424 punct ",",Mannheim
R4540 T5426 T5424 conj Germany,Mannheim
R4541 T5427 T5420 punct ),system
R4542 T5428 T5414 punct .,recovered

GO-BP

Id Subject Object Predicate Lexical cue
T4942 163-170 http://purl.obolibrary.org/obo/GO_0031214 denotes mineral

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T5270 90-92 P0A7Z4 denotes pH