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PMC:1310620 / 21065-21662 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T5542 0-3 DT denotes The
T5543 9-13 NN denotes step
T5544 4-8 JJ denotes next
T5545 19-21 VB denotes be
T5546 14-18 MD denotes will
T5547 22-24 TO denotes to
T5548 25-33 VB denotes identify
T5549 34-47 NNS denotes polymorphisms
T5550 48-52 WDT denotes that
T5551 53-59 VBP denotes affect
T5552 60-70 NN denotes regulation
T5553 71-73 IN denotes of
T5554 74-79 NN denotes XRCC1
T5555 79-81 , denotes ,
T5556 81-86 NN denotes ERCC5
T5557 86-88 , denotes ,
T5558 88-93 NN denotes GSTP1
T5559 93-95 , denotes ,
T5560 95-99 NN denotes SOD1
T5561 99-101 , denotes ,
T5562 101-104 CC denotes and
T5563 105-109 NN denotes GPX1
T5564 110-112 IN denotes by
T5565 113-118 NN denotes CEBPG
T5566 118-119 . denotes .
T5567 119-251 sentence denotes Such polymorphisms should yield biomarkers suitable for more readily accessible samples, such as peripheral blood or buccal smears.
T5568 120-124 JJ denotes Such
T5569 125-138 NNS denotes polymorphisms
T5570 146-151 VB denotes yield
T5571 139-145 MD denotes should
T5572 152-162 NNS denotes biomarkers
T5573 163-171 JJ denotes suitable
T5574 172-175 IN denotes for
T5575 176-180 RBR denotes more
T5576 181-188 RB denotes readily
T5577 189-199 JJ denotes accessible
T5578 200-207 NNS denotes samples
T5579 207-209 , denotes ,
T5580 209-213 JJ denotes such
T5581 214-216 IN denotes as
T5582 217-227 JJ denotes peripheral
T5583 228-233 NN denotes blood
T5584 234-236 CC denotes or
T5585 237-243 JJ denotes buccal
T5586 244-250 NNS denotes smears
T5587 250-251 . denotes .
T5588 251-456 sentence denotes A biomarker combining polymorphisms that affect regulation with those that affect function of antioxidant and DNA repair genes is likely to be the most accurate for identifying individuals at risk for BC.
T5589 252-253 DT denotes A
T5590 254-263 NN denotes biomarker
T5591 379-381 VBZ denotes is
T5592 264-273 VBG denotes combining
T5593 274-287 NNS denotes polymorphisms
T5594 288-292 WDT denotes that
T5595 293-299 VBP denotes affect
T5596 300-310 NN denotes regulation
T5597 311-315 IN denotes with
T5598 316-321 DT denotes those
T5599 322-326 WDT denotes that
T5600 327-333 VBP denotes affect
T5601 334-342 NN denotes function
T5602 343-345 IN denotes of
T5603 346-357 NN denotes antioxidant
T5604 373-378 NNS denotes genes
T5605 358-361 CC denotes and
T5606 362-365 NN denotes DNA
T5607 366-372 NN denotes repair
T5608 382-388 JJ denotes likely
T5609 389-391 TO denotes to
T5610 392-394 VB denotes be
T5611 395-398 DT denotes the
T5612 404-412 JJ denotes accurate
T5613 399-403 RBS denotes most
T5614 413-416 IN denotes for
T5615 417-428 VBG denotes identifying
T5616 429-440 NNS denotes individuals
T5617 441-443 IN denotes at
T5618 444-448 NN denotes risk
T5619 449-452 IN denotes for
T5620 453-455 NN denotes BC
T5621 455-456 . denotes .
T5622 456-597 sentence denotes Biomarkers that accurately identify individuals at risk for BC will improve efficacy of chemoprevention and early detection clinical trials.
T5623 457-467 NNS denotes Biomarkers
T5624 525-532 VB denotes improve
T5625 468-472 WDT denotes that
T5626 484-492 VBP denotes identify
T5627 473-483 RB denotes accurately
T5628 493-504 NNS denotes individuals
T5629 505-507 IN denotes at
T5630 508-512 NN denotes risk
T5631 513-516 IN denotes for
T5632 517-519 NN denotes BC
T5633 520-524 MD denotes will
T5634 533-541 NN denotes efficacy
T5635 542-544 IN denotes of
T5636 545-560 NN denotes chemoprevention
T5637 561-564 CC denotes and
T5638 565-570 JJ denotes early
T5639 571-580 NN denotes detection
T5640 590-596 NNS denotes trials
T5641 581-589 JJ denotes clinical
T5642 596-597 . denotes .
R3571 T5542 T5543 det The,step
R3572 T5543 T5545 nsubj step,be
R3574 T5544 T5543 amod next,step
R3575 T5546 T5545 aux will,be
R3577 T5547 T5548 aux to,identify
R3578 T5548 T5545 xcomp identify,be
R3579 T5549 T5548 dobj polymorphisms,identify
R3581 T5550 T5551 dep that,affect
R3582 T5551 T5549 relcl affect,polymorphisms
R3583 T5552 T5551 dobj regulation,affect
R3585 T5553 T5552 prep of,regulation
R3586 T5554 T5553 pobj XRCC1,of
R3587 T5555 T5554 punct ", ",XRCC1
R3589 T5556 T5554 conj ERCC5,XRCC1
R3590 T5557 T5556 punct ", ",ERCC5
R3591 T5558 T5556 conj GSTP1,ERCC5
R3598 T5562 T5560 cc and,SOD1
R3599 T5563 T5560 conj GPX1,SOD1
R3600 T5564 T5552 prep by,regulation
R3601 T5565 T5564 pobj CEBPG,by
R3602 T5566 T5545 punct .,be
R3604 T5568 T5569 amod Such,polymorphisms
R3605 T5599 T5600 dep that,affect
R3606 T5569 T5570 nsubj polymorphisms,yield
R3607 T5571 T5570 aux should,yield
R3608 T5572 T5570 dobj biomarkers,yield
R3609 T5600 T5598 relcl affect,those
R3610 T5573 T5572 amod suitable,biomarkers
R3611 T5574 T5573 prep for,suitable
R3612 T5601 T5600 dobj function,affect
R3613 T5575 T5576 advmod more,readily
R3614 T5576 T5577 advmod readily,accessible
R3615 T5577 T5578 amod accessible,samples
R3616 T5602 T5601 prep of,function
R3617 T5578 T5574 pobj samples,for
R3618 T5579 T5578 punct ", ",samples
R3619 T5580 T5581 amod such,as
R3620 T5581 T5578 prep as,samples
R3621 T5603 T5604 nmod antioxidant,genes
R3622 T5582 T5583 amod peripheral,blood
R3623 T5604 T5602 pobj genes,of
R3624 T5583 T5581 pobj blood,as
R3625 T5584 T5583 cc or,blood
R3626 T5585 T5586 amod buccal,smears
R3627 T5586 T5583 conj smears,blood
R3628 T5605 T5603 cc and,antioxidant
R3629 T5587 T5570 punct .,yield
R3630 T5589 T5590 det A,biomarker
R3631 T5606 T5607 compound DNA,repair
R3632 T5590 T5591 nsubj biomarker,is
R3633 T5592 T5590 acl combining,biomarker
R3634 T5593 T5592 dobj polymorphisms,combining
R3635 T5607 T5603 conj repair,antioxidant
R3636 T5594 T5595 dep that,affect
R3637 T5595 T5593 relcl affect,polymorphisms
R3638 T5608 T5591 acomp likely,is
R3639 T5596 T5595 dobj regulation,affect
R3640 T5597 T5592 prep with,combining
R3641 T5598 T5597 pobj those,with
R3642 T5609 T5610 aux to,be
R3643 T5610 T5608 xcomp be,likely
R3644 T5611 T5612 det the,accurate
R3645 T5612 T5610 attr accurate,be
R3647 T5613 T5612 advmod most,accurate
R3650 T5614 T5610 prep for,be
R3656 T5615 T5614 pcomp identifying,for
R3659 T5616 T5615 dobj individuals,identifying
R3663 T5617 T5616 prep at,individuals
R3666 T5618 T5617 pobj risk,at
R3670 T5619 T5618 prep for,risk
R3674 T5620 T5619 pobj BC,for
R3677 T5621 T5591 punct .,is
R3680 T5623 T5624 nsubj Biomarkers,improve
R3681 T5625 T5626 dep that,identify
R3684 T5626 T5623 relcl identify,Biomarkers
R3687 T5627 T5626 advmod accurately,identify
R3692 T5628 T5626 dobj individuals,identify
R3694 T5629 T5628 prep at,individuals
R3699 T5630 T5629 pobj risk,at
R3702 T5631 T5630 prep for,risk
R3708 T5632 T5631 pobj BC,for
R3709 T5633 T5624 aux will,improve
R3710 T5634 T5624 dobj efficacy,improve
R3711 T5635 T5634 prep of,efficacy
R3712 T5636 T5635 pobj chemoprevention,of
R3713 T5637 T5634 cc and,efficacy
R3714 T5638 T5639 amod early,detection
R3715 T5639 T5640 nmod detection,trials
R3716 T5640 T5634 conj trials,efficacy
R3717 T5641 T5640 amod clinical,trials
R3718 T5642 T5624 punct .,improve
R3594 T5559 T5558 punct ", ",GSTP1
R3595 T5560 T5558 conj SOD1,GSTP1
R3596 T5561 T5560 punct ", ",SOD1

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T3961 34-47 SO_EXT:polymorphism denotes polymorphisms
T3962 60-70 GO:0065007 denotes regulation
T3963 74-79 PR_EXT:000017504 denotes XRCC1
T3964 81-86 PR_EXT:000007167 denotes ERCC5
T3965 88-93 PR_EXT:000029950 denotes GSTP1
T3966 95-99 PR_EXT:000015399 denotes SOD1
T3967 105-109 PR_EXT:000008210 denotes GPX1
T3968 113-118 PR_EXT:000005311 denotes CEBPG
T3969 125-138 SO_EXT:polymorphism denotes polymorphisms
T3970 152-162 CHEBI_SO_EXT:biomarker denotes biomarkers
T3971 228-233 UBERON:0000178 denotes blood
T3972 237-243 UBERON:0001567 denotes buccal
T3973 254-263 CHEBI_SO_EXT:biomarker denotes biomarker
T3974 274-287 SO_EXT:polymorphism denotes polymorphisms
T3975 300-310 GO:0065007 denotes regulation
T3976 346-357 CHEBI_GO_EXT:antioxidant denotes antioxidant
T3977 350-357 CHEBI_MOP_EXT:oxidising_agent_or_oxidation denotes oxidant
T3978 362-365 CHEBI_SO_EXT:DNA denotes DNA
T3979 362-372 GO:0006281 denotes DNA repair
T3980 373-378 SO_EXT:0000704 denotes genes
T3981 429-440 NCBITaxon:1 denotes individuals
T3982 457-467 CHEBI_SO_EXT:biomarker denotes Biomarkers
T3983 493-504 NCBITaxon:1 denotes individuals

craft-ca-core-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T4150 60-70 GO:0065007 denotes regulation
T4151 74-79 PR:000017504 denotes XRCC1
T4152 81-86 PR:000007167 denotes ERCC5
T4153 88-93 PR:000029950 denotes GSTP1
T4154 95-99 PR:000015399 denotes SOD1
T4155 105-109 PR:000008210 denotes GPX1
T4156 113-118 PR:000005311 denotes CEBPG
T4157 228-233 UBERON:0000178 denotes blood
T4158 237-243 UBERON:0001567 denotes buccal
T4159 300-310 GO:0065007 denotes regulation
T4160 362-372 GO:0006281 denotes DNA repair
T4161 373-378 SO:0000704 denotes genes
T4162 429-440 NCBITaxon:1 denotes individuals
T4163 493-504 NCBITaxon:1 denotes individuals