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PMC:1310620 / 20552-20953 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T5454 0-401 sentence denotes According to the paradigm used in this study, a) a normal phenotype results from regulated transcription of a group of genes by one or more transcription factors, b) the corresponding risk-conferring or disease phenotype results from sub-optimal interaction among those same genes, and c) each phenotype is identifiable and distinguishable through virtually-multiplexed transcript abundance analysis.
T5455 1-10 VBG denotes According
T5456 69-76 VBZ denotes results
T5457 11-13 IN denotes to
T5458 14-17 DT denotes the
T5459 18-26 NN denotes paradigm
T5460 27-31 VBN denotes used
T5461 32-34 IN denotes in
T5462 35-39 DT denotes this
T5463 40-45 NN denotes study
T5464 45-47 , denotes ,
T5465 47-48 LS denotes a
T5466 48-49 -RRB- denotes )
T5467 50-51 DT denotes a
T5468 59-68 NN denotes phenotype
T5469 52-58 JJ denotes normal
T5470 77-81 IN denotes from
T5471 82-91 VBN denotes regulated
T5472 92-105 NN denotes transcription
T5473 106-108 IN denotes of
T5474 109-110 DT denotes a
T5475 111-116 NN denotes group
T5476 117-119 IN denotes of
T5477 120-125 NNS denotes genes
T5478 126-128 IN denotes by
T5479 129-132 CD denotes one
T5480 155-162 NNS denotes factors
T5481 133-135 CC denotes or
T5482 136-140 JJR denotes more
T5483 141-154 NN denotes transcription
T5484 162-164 , denotes ,
T5485 164-165 LS denotes b
T5486 222-229 VBZ denotes results
T5487 165-166 -RRB- denotes )
T5488 167-170 DT denotes the
T5489 212-221 NN denotes phenotype
T5490 171-184 VBG denotes corresponding
T5491 185-189 NN denotes risk
T5492 190-200 VBG denotes conferring
T5493 189-190 HYPH denotes -
T5494 201-203 CC denotes or
T5495 204-211 NN denotes disease
T5496 230-234 IN denotes from
T5497 235-246 JJ denotes sub-optimal
T5498 247-258 NN denotes interaction
T5499 259-264 IN denotes among
T5500 265-270 DT denotes those
T5501 276-281 NNS denotes genes
T5502 271-275 JJ denotes same
T5503 281-283 , denotes ,
T5504 283-286 CC denotes and
T5505 287-288 LS denotes c
T5506 305-307 VBZ denotes is
T5507 288-289 -RRB- denotes )
T5508 290-294 DT denotes each
T5509 295-304 NN denotes phenotype
T5510 308-320 JJ denotes identifiable
T5511 321-324 CC denotes and
T5512 325-340 JJ denotes distinguishable
T5513 341-348 IN denotes through
T5514 349-358 RB denotes virtually
T5515 359-370 VBN denotes multiplexed
T5516 358-359 HYPH denotes -
T5517 392-400 NN denotes analysis
T5518 371-381 NN denotes transcript
T5519 382-391 NN denotes abundance
T5520 400-401 . denotes .
R3453 T5455 T5456 prep According,results
R3456 T5457 T5455 prep to,According
R3458 T5458 T5459 det the,paradigm
R3460 T5459 T5457 pobj paradigm,to
R3461 T5460 T5459 acl used,paradigm
R3462 T5461 T5460 prep in,used
R3463 T5462 T5463 det this,study
R3465 T5463 T5461 pobj study,in
R3466 T5464 T5456 punct ", ",results
R3467 T5465 T5456 meta a,results
R3469 T5466 T5465 punct ),a
R3470 T5467 T5468 det a,phenotype
R3471 T5468 T5456 nsubj phenotype,results
R3473 T5469 T5468 amod normal,phenotype
R3474 T5470 T5456 prep from,results
R3475 T5471 T5472 amod regulated,transcription
R3477 T5472 T5470 pobj transcription,from
R3478 T5473 T5472 prep of,transcription
R3480 T5474 T5475 det a,group
R3482 T5475 T5473 pobj group,of
R3483 T5476 T5475 prep of,group
R3484 T5477 T5476 pobj genes,of
R3485 T5478 T5472 prep by,transcription
R3487 T5479 T5480 nummod one,factors
R3488 T5480 T5478 pobj factors,by
R3490 T5481 T5479 cc or,one
R3491 T5482 T5479 conj more,one
R3492 T5483 T5480 compound transcription,factors
R3493 T5484 T5456 punct ", ",results
R3495 T5485 T5486 meta b,results
R3496 T5486 T5456 conj results,results
R3497 T5487 T5485 punct ),b
R3498 T5488 T5489 det the,phenotype
R3499 T5489 T5486 nsubj phenotype,results
R3500 T5490 T5489 amod corresponding,phenotype
R3502 T5491 T5492 npadvmod risk,conferring
R3503 T5492 T5489 amod conferring,phenotype
R3508 T5493 T5492 punct -,conferring
R3509 T5494 T5492 cc or,conferring
R3511 T5495 T5492 conj disease,conferring
R3512 T5496 T5486 prep from,results
R3514 T5497 T5498 amod sub-optimal,interaction
R3515 T5498 T5496 pobj interaction,from
R3516 T5499 T5498 prep among,interaction
R3518 T5500 T5501 det those,genes
R3519 T5501 T5499 pobj genes,among
R3520 T5502 T5501 amod same,genes
R3522 T5503 T5486 punct ", ",results
R3523 T5504 T5486 cc and,results
R3525 T5505 T5506 meta c,is
R3526 T5506 T5486 conj is,results
R3527 T5507 T5505 punct ),c
R3528 T5508 T5509 det each,phenotype
R3530 T5509 T5506 nsubj phenotype,is
R3531 T5510 T5506 acomp identifiable,is
R3533 T5511 T5510 cc and,identifiable
R3534 T5512 T5510 conj distinguishable,identifiable
R3535 T5513 T5512 prep through,distinguishable
R3536 T5514 T5515 advmod virtually,multiplexed
R3538 T5515 T5517 amod multiplexed,analysis
R3539 T5516 T5515 punct -,multiplexed
R3540 T5517 T5513 pobj analysis,through
R3542 T5518 T5519 compound transcript,abundance
R3543 T5519 T5517 compound abundance,analysis
R3545 T5520 T5456 punct .,results

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T3953 82-91 GO:0065007 denotes regulated
T3954 92-105 GO_EXT:transcription denotes transcription
T3955 120-125 SO_EXT:0000704 denotes genes
T3956 141-154 GO_EXT:transcription denotes transcription
T3957 141-162 GO_EXT:transcription_factor denotes transcription factors
T3958 276-281 SO_EXT:0000704 denotes genes
T3959 371-381 SO_EXT:0000673 denotes transcript

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T4145 82-91 GO:0065007 denotes regulated
T4146 120-125 SO:0000704 denotes genes
T4147 276-281 SO:0000704 denotes genes
T4148 371-381 SO:0000673 denotes transcript