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PMC:1310620 / 1019-1405 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T439 0-7 NNS denotes Methods
T440 7-155 sentence denotes The putative transcription factor recognition sites common to six of the antioxidant genes were identified through in silico DNA sequence analysis.
T441 8-11 DT denotes The
T442 54-59 NNS denotes sites
T443 12-20 JJ denotes putative
T444 21-34 NN denotes transcription
T445 35-41 NN denotes factor
T446 42-53 NN denotes recognition
T447 104-114 VBN denotes identified
T448 60-66 JJ denotes common
T449 67-69 IN denotes to
T450 70-73 CD denotes six
T451 74-76 IN denotes of
T452 77-80 DT denotes the
T453 93-98 NNS denotes genes
T454 81-92 NN denotes antioxidant
T455 99-103 VBD denotes were
T456 115-122 IN denotes through
T457 123-125 FW denotes in
T458 126-132 FW denotes silico
T459 146-154 NN denotes analysis
T460 133-136 NN denotes DNA
T461 137-145 NN denotes sequence
T462 154-155 . denotes .
T463 155-386 sentence denotes The transcript abundance values of these transcription factors (n = 6) and an expanded group of antioxidant and DNA repair genes (n = 16) were measured simultaneously by quantitative PCR in NBEC of 24 non-BC and 25 BC individuals.
T464 156-159 DT denotes The
T465 181-187 NNS denotes values
T466 160-170 NN denotes transcript
T467 171-180 NN denotes abundance
T468 299-307 VBN denotes measured
T469 188-190 IN denotes of
T470 191-196 DT denotes these
T471 211-218 NNS denotes factors
T472 197-210 NN denotes transcription
T473 219-220 -LRB- denotes (
T474 224-225 CD denotes 6
T475 220-221 NN denotes n
T476 222-223 SYM denotes =
T477 225-226 -RRB- denotes )
T478 227-230 CC denotes and
T479 231-233 DT denotes an
T480 243-248 NN denotes group
T481 234-242 VBN denotes expanded
T482 249-251 IN denotes of
T483 252-263 NN denotes antioxidant
T484 279-284 NNS denotes genes
T485 264-267 CC denotes and
T486 268-271 NN denotes DNA
T487 272-278 NN denotes repair
T488 285-286 -LRB- denotes (
T489 290-292 CD denotes 16
T490 286-287 NN denotes n
T491 288-289 SYM denotes =
T492 292-293 -RRB- denotes )
T493 294-298 VBD denotes were
T494 308-322 RB denotes simultaneously
T495 323-325 IN denotes by
T496 326-338 JJ denotes quantitative
T497 339-342 NN denotes PCR
T498 343-345 IN denotes in
T499 346-350 NN denotes NBEC
T500 351-353 IN denotes of
T501 354-356 CD denotes 24
T502 357-363 JJ denotes non-BC
T503 364-367 CC denotes and
T504 368-370 CD denotes 25
T505 371-373 NN denotes BC
T506 374-385 NNS denotes individuals
T507 385-386 . denotes .
R160 T441 T442 det The,sites
R161 T442 T447 nsubjpass sites,identified
R166 T448 T442 amod common,sites
R167 T449 T448 prep to,common
R168 T450 T449 pobj six,to
R169 T451 T450 prep of,six
R170 T452 T453 det the,genes
R171 T453 T451 pobj genes,of
R173 T455 T447 auxpass were,identified
R174 T456 T447 prep through,identified
R175 T457 T458 advmod in,silico
R176 T458 T459 amod silico,analysis
R177 T459 T456 pobj analysis,through
R180 T462 T447 punct .,identified
R181 T464 T465 det The,values
R182 T465 T468 nsubjpass values,measured
R185 T469 T465 prep of,values
R186 T470 T471 det these,factors
R187 T471 T469 pobj factors,of
R189 T473 T474 punct (,6
R190 T474 T465 parataxis 6,values
R193 T477 T474 punct ),6
R194 T478 T465 cc and,values
R195 T479 T480 det an,group
R196 T480 T465 conj group,values
R198 T482 T480 prep of,group
R199 T483 T484 nmod antioxidant,genes
R200 T484 T482 pobj genes,of
R204 T488 T489 punct (,16
R205 T489 T480 parataxis 16,group
R208 T492 T489 punct ),16
R209 T493 T468 auxpass were,measured
R210 T494 T468 advmod simultaneously,measured
R211 T495 T468 prep by,measured
R212 T496 T497 amod quantitative,PCR
R213 T497 T495 pobj PCR,by
R214 T498 T468 prep in,measured
R215 T499 T498 pobj NBEC,in
R216 T500 T499 prep of,NBEC
R217 T501 T500 pobj 24,of
R218 T502 T501 amod non-BC,24
R219 T503 T501 cc and,24
R220 T504 T505 nummod 25,BC
R221 T505 T506 compound BC,individuals
R222 T506 T501 conj individuals,24
R223 T507 T468 punct .,measured
R162 T443 T442 amod putative,sites
R163 T444 T445 compound transcription,factor
R164 T445 T446 compound factor,recognition
R165 T446 T442 compound recognition,sites
R172 T454 T453 compound antioxidant,genes
R178 T460 T461 compound DNA,sequence
R179 T461 T459 compound sequence,analysis
R183 T466 T465 compound transcript,values
R184 T467 T465 compound abundance,values
R188 T472 T471 compound transcription,factors
R191 T475 T474 nsubj n,6
R192 T476 T474 punct =,6
R197 T481 T480 amod expanded,group
R201 T485 T483 cc and,antioxidant
R202 T486 T487 compound DNA,repair
R203 T487 T483 conj repair,antioxidant
R206 T490 T489 nsubj n,16
R207 T491 T489 punct =,16

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T139 21-34 GO_EXT:transcription denotes transcription
T140 21-41 GO_EXT:transcription_factor denotes transcription factor
T141 21-59 SO_EXT:0000235 denotes transcription factor recognition sites
T142 81-92 CHEBI_GO_EXT:antioxidant denotes antioxidant
T143 85-92 CHEBI_MOP_EXT:oxidising_agent_or_oxidation denotes oxidant
T144 93-98 SO_EXT:0000704 denotes genes
T145 133-136 CHEBI_SO_EXT:DNA denotes DNA
T146 137-145 SO_EXT:biological_sequence denotes sequence
T147 160-170 SO_EXT:0000673 denotes transcript
T148 197-210 GO_EXT:transcription denotes transcription
T149 197-218 GO_EXT:transcription_factor denotes transcription factors
T150 252-263 CHEBI_GO_EXT:antioxidant denotes antioxidant
T151 256-263 CHEBI_MOP_EXT:oxidising_agent_or_oxidation denotes oxidant
T152 268-271 CHEBI_SO_EXT:DNA denotes DNA
T153 268-278 GO:0006281 denotes DNA repair
T154 279-284 SO_EXT:0000704 denotes genes
T155 374-385 NCBITaxon:1 denotes individuals

craft-ca-core-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T227 21-59 SO:0000235 denotes transcription factor recognition sites
T228 93-98 SO:0000704 denotes genes
T229 160-170 SO:0000673 denotes transcript
T230 268-278 GO:0006281 denotes DNA repair
T231 279-284 SO:0000704 denotes genes
T232 374-385 NCBITaxon:1 denotes individuals