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PMC:1283364 / 6285-6551 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T1706 0-266 sentence denotes We then isolated the moPrP.XhoI intron by amplification with primers that added an external BamHI site to the 5′ end of exon 1 and ran through the Asp718 site of exon 2 (forward: GCC GGA TCC GAT CAG CAG ACC GAT TCT GG; reverse: GCC GGT ACC ACT AGG AAG GCA GAA TGC).
T1707 1-3 PRP denotes We
T1708 9-17 VBD denotes isolated
T1709 4-8 RB denotes then
T1710 18-21 DT denotes the
T1711 33-39 NN denotes intron
T1712 22-32 NN denotes moPrP.XhoI
T1713 40-42 IN denotes by
T1714 43-56 NN denotes amplification
T1715 57-61 IN denotes with
T1716 62-69 NNS denotes primers
T1717 70-74 WDT denotes that
T1718 75-80 VBD denotes added
T1719 81-83 DT denotes an
T1720 99-103 NN denotes site
T1721 84-92 JJ denotes external
T1722 93-98 NN denotes BamHI
T1723 104-106 IN denotes to
T1724 107-110 DT denotes the
T1725 114-117 NN denotes end
T1726 111-112 CD denotes 5
T1727 112-113 SYM denotes ′
T1728 118-120 IN denotes of
T1729 121-125 NN denotes exon
T1730 126-127 CD denotes 1
T1731 128-131 CC denotes and
T1732 132-135 VBD denotes ran
T1733 136-143 IN denotes through
T1734 144-147 DT denotes the
T1735 155-159 NN denotes site
T1736 148-154 NN denotes Asp718
T1737 160-162 IN denotes of
T1738 163-167 NN denotes exon
T1739 168-169 CD denotes 2
T1740 170-171 -LRB- denotes (
T1741 261-264 NN denotes TGC
T1742 171-178 NN denotes forward
T1743 216-218 NN denotes GG
T1744 178-180 : denotes :
T1745 180-183 NN denotes GCC
T1746 184-187 NN denotes GGA
T1747 188-191 NN denotes TCC
T1748 192-195 NN denotes GAT
T1749 196-199 NN denotes CAG
T1750 200-203 NN denotes CAG
T1751 204-207 NN denotes ACC
T1752 208-211 NN denotes GAT
T1753 212-215 NN denotes TCT
T1754 218-219 : denotes ;
T1755 220-227 NN denotes reverse
T1756 227-229 : denotes :
T1757 229-232 NN denotes GCC
T1758 233-236 NN denotes GGT
T1759 237-240 NN denotes ACC
T1760 241-244 NN denotes ACT
T1761 245-248 NN denotes AGG
T1762 249-252 NN denotes AAG
T1763 253-256 NN denotes GCA
T1764 257-260 NN denotes GAA
T1765 264-265 -RRB- denotes )
T1766 265-266 . denotes .
R1081 T1707 T1708 nsubj We,isolated
R1082 T1709 T1708 advmod then,isolated
R1083 T1710 T1711 det the,intron
R1084 T1711 T1708 dobj intron,isolated
R1085 T1712 T1711 compound moPrP.XhoI,intron
R1086 T1713 T1708 prep by,isolated
R1087 T1714 T1713 pobj amplification,by
R1088 T1715 T1714 prep with,amplification
R1089 T1716 T1715 pobj primers,with
R1090 T1717 T1718 dep that,added
R1091 T1718 T1716 relcl added,primers
R1092 T1719 T1720 det an,site
R1093 T1720 T1718 dobj site,added
R1094 T1721 T1720 amod external,site
R1095 T1722 T1720 compound BamHI,site
R1096 T1723 T1718 prep to,added
R1097 T1724 T1725 det the,end
R1098 T1725 T1723 pobj end,to
R1099 T1726 T1725 nummod 5,end
R1100 T1727 T1726 punct ′,5
R1101 T1728 T1725 prep of,end
R1102 T1729 T1728 pobj exon,of
R1103 T1730 T1729 nummod 1,exon
R1104 T1731 T1718 cc and,added
R1105 T1732 T1718 conj ran,added
R1106 T1733 T1732 prep through,ran
R1107 T1734 T1735 det the,site
R1108 T1735 T1733 pobj site,through
R1109 T1736 T1735 compound Asp718,site
R1110 T1737 T1735 prep of,site
R1111 T1738 T1737 pobj exon,of
R1112 T1739 T1738 nummod 2,exon
R1113 T1740 T1741 punct (,TGC
R1114 T1741 T1735 parataxis TGC,site
R1115 T1742 T1743 dep forward,GG
R1116 T1743 T1741 dep GG,TGC
R1117 T1744 T1743 punct : ,GG
R1118 T1745 T1743 compound GCC,GG
R1119 T1746 T1743 compound GGA,GG
R1120 T1747 T1743 compound TCC,GG
R1121 T1748 T1743 compound GAT,GG
R1122 T1749 T1743 compound CAG,GG
R1123 T1750 T1743 compound CAG,GG
R1124 T1751 T1743 compound ACC,GG
R1125 T1752 T1743 compound GAT,GG
R1126 T1753 T1743 compound TCT,GG
R1127 T1754 T1741 punct ;,TGC
R1128 T1755 T1741 dep reverse,TGC
R1129 T1756 T1741 punct : ,TGC
R1130 T1757 T1741 compound GCC,TGC
R1131 T1758 T1741 compound GGT,TGC
R1132 T1759 T1741 compound ACC,TGC
R1133 T1760 T1741 compound ACT,TGC
R1134 T1761 T1741 compound AGG,TGC
R1135 T1762 T1741 compound AAG,TGC
R1136 T1763 T1741 compound GCA,TGC
R1137 T1764 T1741 compound GAA,TGC
R1138 T1765 T1741 punct ),TGC
R1139 T1766 T1708 punct .,isolated

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T1468 22-27 PR_EXT:P04925 denotes moPrP
T1469 33-39 SO_EXT:0000188 denotes intron
T1470 62-69 SO_EXT:0000112 denotes primers
T1471 93-98 PR_EXT:P23940 denotes BamHI
T1472 121-125 SO_EXT:0000147 denotes exon
T1473 163-167 SO_EXT:0000147 denotes exon
T1474 171-178 SO:0001030 denotes forward
T1475 220-227 SO:0001031 denotes reverse

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T1387 22-27 PR:P04925 denotes moPrP
T1388 33-39 SO:0000188 denotes intron
T1389 62-69 SO:0000112 denotes primers
T1390 93-98 PR:P23940 denotes BamHI
T1391 121-125 SO:0000147 denotes exon
T1392 163-167 SO:0000147 denotes exon
T1393 171-178 SO:0001030 denotes forward
T1394 220-227 SO:0001031 denotes reverse