> top > docs > PMC:1255741 > spans > 56810-57422 > annotations

PMC:1255741 / 56810-57422 JSONTXT

Annnotations TAB JSON ListView MergeView

craft-sa-dev

Id Subject Object Predicate Lexical cue
T14252 0-10 NN denotes Immunoblot
T14253 11-19 NN denotes analysis
T14254 19-128 sentence denotes Mouse brains were removed, and the hippocampus, olfactory bulb, and remaining forebrain areas were isolated.
T14255 20-25 NN denotes Mouse
T14256 26-32 NNS denotes brains
T14257 38-45 VBN denotes removed
T14258 33-37 VBD denotes were
T14259 45-47 , denotes ,
T14260 47-50 CC denotes and
T14261 51-54 DT denotes the
T14262 55-66 NN denotes hippocampus
T14263 119-127 VBN denotes isolated
T14264 66-68 , denotes ,
T14265 68-77 JJ denotes olfactory
T14266 78-82 NN denotes bulb
T14267 82-84 , denotes ,
T14268 84-87 CC denotes and
T14269 88-97 VBG denotes remaining
T14270 108-113 NNS denotes areas
T14271 98-107 NN denotes forebrain
T14272 114-118 VBD denotes were
T14273 127-128 . denotes .
T14274 128-206 sentence denotes Total protein was prepared, and immunoblots were performed as described [87].
T14275 129-134 JJ denotes Total
T14276 135-142 NN denotes protein
T14277 147-155 VBN denotes prepared
T14278 143-146 VBD denotes was
T14279 155-157 , denotes ,
T14280 157-160 CC denotes and
T14281 161-172 NNS denotes immunoblots
T14282 178-187 VBN denotes performed
T14283 173-177 VBD denotes were
T14284 188-190 IN denotes as
T14285 191-200 VBN denotes described
T14286 201-202 -LRB- denotes [
T14287 202-204 CD denotes 87
T14288 204-205 -RRB- denotes ]
T14289 205-206 . denotes .
T14290 206-454 sentence denotes Antibodies used were against GluR-B (1:800, monoclonal; Chemicon), β-actin (1:40,000, monoclonal; Sigma, St. Louis, Missouri, United States) as an internal standard, and secondary goat anti-rabbit and goat anti-mouse antibodies (Vector, 1:15,000).
T14291 207-217 NNS denotes Antibodies
T14292 223-227 VBD denotes were
T14293 218-222 VBN denotes used
T14294 228-235 IN denotes against
T14295 236-240 NN denotes GluR
T14296 241-242 NN denotes B
T14297 240-241 HYPH denotes -
T14298 243-244 -LRB- denotes (
T14299 263-271 NNP denotes Chemicon
T14300 244-245 CD denotes 1
T14301 251-261 JJ denotes monoclonal
T14302 245-246 SYM denotes :
T14303 246-249 CD denotes 800
T14304 249-251 , denotes ,
T14305 261-262 : denotes ;
T14306 271-272 -RRB- denotes )
T14307 272-274 , denotes ,
T14308 274-275 NN denotes β
T14309 276-281 NN denotes actin
T14310 275-276 HYPH denotes -
T14311 282-283 -LRB- denotes (
T14312 305-310 NNP denotes Sigma
T14313 283-284 CD denotes 1
T14314 293-303 JJ denotes monoclonal
T14315 284-285 SYM denotes :
T14316 285-291 CD denotes 40,000
T14317 291-293 , denotes ,
T14318 303-304 : denotes ;
T14319 310-312 , denotes ,
T14320 312-315 NNP denotes St.
T14321 316-321 NNP denotes Louis
T14322 321-323 , denotes ,
T14323 323-331 NNP denotes Missouri
T14324 331-333 , denotes ,
T14325 333-339 NNP denotes United
T14326 340-346 NNP denotes States
T14327 346-347 -RRB- denotes )
T14328 348-350 IN denotes as
T14329 351-353 DT denotes an
T14330 363-371 NN denotes standard
T14331 354-362 JJ denotes internal
T14332 371-373 , denotes ,
T14333 373-376 CC denotes and
T14334 377-386 JJ denotes secondary
T14335 424-434 NNS denotes antibodies
T14336 387-391 NN denotes goat
T14337 392-403 JJ denotes anti-rabbit
T14338 404-407 CC denotes and
T14339 408-412 NN denotes goat
T14340 413-423 JJ denotes anti-mouse
T14341 435-436 -LRB- denotes (
T14342 444-445 CD denotes 1
T14343 436-442 NNP denotes Vector
T14344 442-444 , denotes ,
T14345 445-446 SYM denotes :
T14346 446-452 CD denotes 15,000
T14347 452-453 -RRB- denotes )
T14348 453-454 . denotes .
T14349 454-612 sentence denotes Immunoreactivity was detected with ECLplus (Amersham, Little Chalfont, United Kingdom), and immunoblots were scanned and quantitatively analyzed with ImageJ.
T14350 455-471 NN denotes Immunoreactivity
T14351 476-484 VBN denotes detected
T14352 472-475 VBD denotes was
T14353 485-489 IN denotes with
T14354 490-497 NNP denotes ECLplus
T14355 498-499 -LRB- denotes (
T14356 499-507 NNP denotes Amersham
T14357 507-509 , denotes ,
T14358 509-515 NNP denotes Little
T14359 516-524 NNP denotes Chalfont
T14360 524-526 , denotes ,
T14361 526-532 NNP denotes United
T14362 533-540 NNP denotes Kingdom
T14363 540-541 -RRB- denotes )
T14364 541-543 , denotes ,
T14365 543-546 CC denotes and
T14366 547-558 NNS denotes immunoblots
T14367 564-571 VBN denotes scanned
T14368 559-563 VBD denotes were
T14369 572-575 CC denotes and
T14370 576-590 RB denotes quantitatively
T14371 591-599 VBN denotes analyzed
T14372 600-604 IN denotes with
T14373 605-611 NNP denotes ImageJ
T14374 611-612 . denotes .
R9296 T14252 T14253 compound Immunoblot,analysis
R9297 T14255 T14256 compound Mouse,brains
R9298 T14256 T14257 nsubjpass brains,removed
R9299 T14258 T14257 auxpass were,removed
R9300 T14259 T14257 punct ", ",removed
R9301 T14260 T14257 cc and,removed
R9302 T14261 T14262 det the,hippocampus
R9303 T14262 T14263 nsubjpass hippocampus,isolated
R9304 T14263 T14257 conj isolated,removed
R9305 T14264 T14262 punct ", ",hippocampus
R9306 T14265 T14266 amod olfactory,bulb
R9307 T14266 T14262 conj bulb,hippocampus
R9308 T14267 T14266 punct ", ",bulb
R9309 T14268 T14266 cc and,bulb
R9310 T14269 T14270 amod remaining,areas
R9311 T14270 T14266 conj areas,bulb
R9312 T14271 T14270 compound forebrain,areas
R9313 T14272 T14263 auxpass were,isolated
R9314 T14273 T14263 punct .,isolated
R9315 T14275 T14276 amod Total,protein
R9316 T14276 T14277 nsubjpass protein,prepared
R9317 T14278 T14277 auxpass was,prepared
R9318 T14279 T14277 punct ", ",prepared
R9319 T14280 T14277 cc and,prepared
R9320 T14281 T14282 nsubjpass immunoblots,performed
R9321 T14282 T14277 conj performed,prepared
R9322 T14283 T14282 auxpass were,performed
R9323 T14284 T14285 mark as,described
R9324 T14285 T14282 advcl described,performed
R9325 T14286 T14287 punct [,87
R9326 T14287 T14282 parataxis 87,performed
R9327 T14288 T14287 punct ],87
R9328 T14289 T14282 punct .,performed
R9329 T14291 T14292 nsubj Antibodies,were
R9330 T14293 T14291 acl used,Antibodies
R9331 T14294 T14292 prep against,were
R9332 T14295 T14296 compound GluR,B
R9333 T14296 T14294 pobj B,against
R9334 T14297 T14296 punct -,B
R9335 T14298 T14299 punct (,Chemicon
R9336 T14299 T14296 parataxis Chemicon,B
R9337 T14300 T14301 dep 1,monoclonal
R9338 T14301 T14299 dep monoclonal,Chemicon
R9339 T14302 T14303 punct :,800
R9340 T14303 T14300 prep 800,1
R9341 T14304 T14301 punct ", ",monoclonal
R9342 T14305 T14299 punct ;,Chemicon
R9343 T14306 T14299 punct ),Chemicon
R9344 T14307 T14296 punct ", ",B
R9345 T14308 T14309 compound β,actin
R9346 T14309 T14296 appos actin,B
R9347 T14310 T14309 punct -,actin
R9348 T14311 T14312 punct (,Sigma
R9349 T14312 T14309 parataxis Sigma,actin
R9350 T14313 T14314 dep 1,monoclonal
R9351 T14314 T14312 dep monoclonal,Sigma
R9352 T14315 T14316 punct :,"40,000"
R9353 T14316 T14313 prep "40,000",1
R9354 T14317 T14314 punct ", ",monoclonal
R9355 T14318 T14312 punct ;,Sigma
R9356 T14319 T14312 punct ", ",Sigma
R9357 T14320 T14321 compound St.,Louis
R9358 T14321 T14312 npadvmod Louis,Sigma
R9359 T14322 T14312 punct ", ",Sigma
R9360 T14323 T14312 npadvmod Missouri,Sigma
R9361 T14324 T14312 punct ", ",Sigma
R9362 T14325 T14326 compound United,States
R9363 T14326 T14312 npadvmod States,Sigma
R9364 T14327 T14312 punct ),Sigma
R9365 T14328 T14296 prep as,B
R9366 T14329 T14330 det an,standard
R9367 T14330 T14328 pobj standard,as
R9368 T14331 T14330 amod internal,standard
R9369 T14332 T14296 punct ", ",B
R9370 T14333 T14296 cc and,B
R9371 T14334 T14335 amod secondary,antibodies
R9372 T14335 T14296 conj antibodies,B
R9373 T14336 T14335 nmod goat,antibodies
R9374 T14337 T14336 amod anti-rabbit,goat
R9375 T14338 T14336 cc and,goat
R9376 T14339 T14336 conj goat,goat
R9377 T14340 T14339 amod anti-mouse,goat
R9378 T14341 T14342 punct (,1
R9379 T14342 T14335 parataxis 1,antibodies
R9380 T14343 T14342 dep Vector,1
R9381 T14344 T14342 punct ", ",1
R9382 T14345 T14346 punct :,"15,000"
R9383 T14346 T14342 prep "15,000",1
R9384 T14347 T14342 punct ),1
R9385 T14348 T14292 punct .,were
R9386 T14350 T14351 nsubjpass Immunoreactivity,detected
R9387 T14352 T14351 auxpass was,detected
R9388 T14353 T14351 prep with,detected
R9389 T14354 T14353 pobj ECLplus,with
R9390 T14355 T14356 punct (,Amersham
R9391 T14356 T14354 parataxis Amersham,ECLplus
R9392 T14357 T14356 punct ", ",Amersham
R9393 T14358 T14359 compound Little,Chalfont
R9394 T14359 T14356 npadvmod Chalfont,Amersham
R9395 T14360 T14356 punct ", ",Amersham
R9396 T14361 T14362 compound United,Kingdom
R9397 T14362 T14356 npadvmod Kingdom,Amersham
R9398 T14363 T14356 punct ),Amersham
R9399 T14364 T14351 punct ", ",detected
R9400 T14365 T14351 cc and,detected
R9401 T14366 T14367 nsubj immunoblots,scanned
R9402 T14367 T14351 conj scanned,detected
R9403 T14368 T14367 aux were,scanned
R9404 T14369 T14367 cc and,scanned
R9405 T14370 T14371 advmod quantitatively,analyzed
R9406 T14371 T14367 conj analyzed,scanned
R9407 T14372 T14367 prep with,scanned
R9408 T14373 T14372 pobj ImageJ,with
R9409 T14374 T14367 punct .,scanned

2_test

Id Subject Object Predicate Lexical cue
16216087-11431570-84723796 202-204 11431570 denotes 87
T28282 202-204 11431570 denotes 87

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T14388 20-25 NCBITaxon:10088 denotes Mouse
T14389 26-32 UBERON:0000955 denotes brains
T14390 55-66 UBERON_EXT:hippocampus_proper_or_hippocampal_formation denotes hippocampus
T14391 68-77 GO:0007608 denotes olfactory
T14392 68-82 UBERON:0002264 denotes olfactory bulb
T14393 98-107 UBERON:0001890 denotes forebrain
T14394 135-142 CHEBI_PR_EXT:protein denotes protein
T14395 207-217 GO:0042571 denotes Antibodies
T14396 236-240 GO_EXT:0008066 denotes GluR
T14397 236-242 PR_EXT:000008234 denotes GluR-B
T14398 274-281 PR_EXT:000003676 denotes β-actin
T14399 387-391 NCBITaxon:9925 denotes goat
T14400 397-403 NCBITaxon:9986 denotes rabbit
T14401 408-412 NCBITaxon:9925 denotes goat
T14402 418-423 NCBITaxon:10088 denotes mouse
T14403 424-434 GO:0042571 denotes antibodies

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T14375 20-25 NCBITaxon:10088 denotes Mouse
T14376 26-32 UBERON:0000955 denotes brains
T14377 68-77 GO:0007608 denotes olfactory
T14378 68-82 UBERON:0002264 denotes olfactory bulb
T14379 98-107 UBERON:0001890 denotes forebrain
T14380 207-217 GO:0042571 denotes Antibodies
T14381 236-242 PR:000008234 denotes GluR-B
T14382 274-281 PR:000003676 denotes β-actin
T14383 387-391 NCBITaxon:9925 denotes goat
T14384 397-403 NCBITaxon:9986 denotes rabbit
T14385 408-412 NCBITaxon:9925 denotes goat
T14386 418-423 NCBITaxon:10088 denotes mouse
T14387 424-434 GO:0042571 denotes antibodies