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PMC:1255741 / 21955-22930 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T5502 0-5 IN denotes While
T5503 61-67 VBD denotes showed
T5504 6-9 DT denotes the
T5505 52-60 NN denotes behavior
T5506 10-18 VBN denotes improved
T5507 19-23 NN denotes odor
T5508 24-38 NN denotes discrimination
T5509 39-42 CC denotes and
T5510 43-51 NN denotes learning
T5511 166-169 VBD denotes was
T5512 68-72 RB denotes only
T5513 80-91 NN denotes variability
T5514 73-79 JJ denotes little
T5515 91-93 , denotes ,
T5516 93-96 DT denotes the
T5517 127-138 NN denotes performance
T5518 97-110 RB denotes significantly
T5519 111-119 VBN denotes impaired
T5520 120-126 NN denotes memory
T5521 139-147 VBN denotes observed
T5522 148-150 IN denotes in
T5523 151-155 NN denotes GluR
T5524 156-160 NN denotes BΔFB
T5525 155-156 HYPH denotes -
T5526 161-165 NNS denotes mice
T5527 170-176 RB denotes highly
T5528 177-185 JJ denotes variable
T5529 186-191 IN denotes among
T5530 192-202 JJ denotes individual
T5531 203-210 NNS denotes animals
T5532 211-219 VBN denotes compared
T5533 220-224 IN denotes with
T5534 225-232 NN denotes control
T5535 233-244 NNS denotes littermates
T5536 245-246 -LRB- denotes (
T5537 253-255 NN denotes 2E
T5538 246-252 NN denotes Figure
T5539 255-256 -RRB- denotes )
T5540 256-257 . denotes .
T5541 257-470 sentence denotes This variability in olfactory memory was reflected in the level and extent of Cre-recombinase expression in forebrain of transgenic TgCre4 mice, as visualized by Cre-activity in the Cre-indicator mouse line R26R.
T5542 258-262 DT denotes This
T5543 263-274 NN denotes variability
T5544 299-308 VBN denotes reflected
T5545 275-277 IN denotes in
T5546 278-287 JJ denotes olfactory
T5547 288-294 NN denotes memory
T5548 295-298 VBD denotes was
T5549 309-311 IN denotes in
T5550 312-315 DT denotes the
T5551 316-321 NN denotes level
T5552 322-325 CC denotes and
T5553 326-332 NN denotes extent
T5554 333-335 IN denotes of
T5555 336-339 NN denotes Cre
T5556 340-351 NN denotes recombinase
T5557 339-340 HYPH denotes -
T5558 352-362 NN denotes expression
T5559 363-365 IN denotes in
T5560 366-375 NN denotes forebrain
T5561 376-378 IN denotes of
T5562 379-389 JJ denotes transgenic
T5563 397-401 NNS denotes mice
T5564 390-396 NN denotes TgCre4
T5565 401-403 , denotes ,
T5566 403-405 IN denotes as
T5567 406-416 VBN denotes visualized
T5568 417-419 IN denotes by
T5569 420-423 NN denotes Cre
T5570 424-432 NN denotes activity
T5571 423-424 HYPH denotes -
T5572 433-435 IN denotes in
T5573 436-439 DT denotes the
T5574 460-464 NN denotes line
T5575 440-443 NN denotes Cre
T5576 444-453 NN denotes indicator
T5577 443-444 HYPH denotes -
T5578 454-459 NN denotes mouse
T5579 465-469 NN denotes R26R
T5580 469-470 . denotes .
T5581 470-718 sentence denotes We observed that onset and extent of Cre-recombinase expression in different forebrain regions varied among individual TgCre4 mice (Figure 3A), which could also be directly visualized by immunohistochemistry with a Cre-antibody (unpublished data).
T5582 471-473 PRP denotes We
T5583 474-482 VBD denotes observed
T5584 483-487 IN denotes that
T5585 566-572 VBD denotes varied
T5586 488-493 NN denotes onset
T5587 494-497 CC denotes and
T5588 498-504 NN denotes extent
T5589 505-507 IN denotes of
T5590 508-511 NN denotes Cre
T5591 512-523 NN denotes recombinase
T5592 511-512 HYPH denotes -
T5593 524-534 NN denotes expression
T5594 535-537 IN denotes in
T5595 538-547 JJ denotes different
T5596 558-565 NNS denotes regions
T5597 548-557 NN denotes forebrain
T5598 573-578 IN denotes among
T5599 579-589 JJ denotes individual
T5600 597-601 NNS denotes mice
T5601 590-596 NN denotes TgCre4
T5602 602-603 -LRB- denotes (
T5603 610-612 NN denotes 3A
T5604 603-609 NN denotes Figure
T5605 612-613 -RRB- denotes )
T5606 613-615 , denotes ,
T5607 615-620 WDT denotes which
T5608 644-654 VBN denotes visualized
T5609 621-626 MD denotes could
T5610 627-631 RB denotes also
T5611 632-634 VB denotes be
T5612 635-643 RB denotes directly
T5613 655-657 IN denotes by
T5614 658-678 NN denotes immunohistochemistry
T5615 679-683 IN denotes with
T5616 684-685 DT denotes a
T5617 690-698 NN denotes antibody
T5618 686-689 NN denotes Cre
T5619 689-690 HYPH denotes -
T5620 699-700 -LRB- denotes (
T5621 712-716 NNS denotes data
T5622 700-711 JJ denotes unpublished
T5623 716-717 -RRB- denotes )
T5624 717-718 . denotes .
T5625 718-975 sentence denotes As this variability persisted after several backcrosses, and Southern blot analysis revealed no differences of transgene integration or number among animals (Figure 3B), it could not be attributed to genetic differences but rather to epigenetic mechanisms.
T5626 719-721 IN denotes As
T5627 739-748 VBD denotes persisted
T5628 722-726 DT denotes this
T5629 727-738 NN denotes variability
T5630 905-915 VBN denotes attributed
T5631 749-754 IN denotes after
T5632 755-762 JJ denotes several
T5633 763-774 NNS denotes backcrosses
T5634 774-776 , denotes ,
T5635 776-779 CC denotes and
T5636 780-788 NNP denotes Southern
T5637 789-793 NN denotes blot
T5638 794-802 NN denotes analysis
T5639 803-811 VBD denotes revealed
T5640 812-814 DT denotes no
T5641 815-826 NNS denotes differences
T5642 827-829 IN denotes of
T5643 830-839 NN denotes transgene
T5644 840-851 NN denotes integration
T5645 852-854 CC denotes or
T5646 855-861 NN denotes number
T5647 862-867 IN denotes among
T5648 868-875 NNS denotes animals
T5649 876-877 -LRB- denotes (
T5650 884-886 NN denotes 3B
T5651 877-883 NN denotes Figure
T5652 886-887 -RRB- denotes )
T5653 887-889 , denotes ,
T5654 889-891 PRP denotes it
T5655 892-897 MD denotes could
T5656 898-901 RB denotes not
T5657 902-904 VB denotes be
T5658 916-918 IN denotes to
T5659 919-926 JJ denotes genetic
T5660 927-938 NNS denotes differences
T5661 939-942 CC denotes but
T5662 943-949 RB denotes rather
T5663 950-952 IN denotes to
T5664 953-963 JJ denotes epigenetic
T5665 964-974 NNS denotes mechanisms
T5666 974-975 . denotes .
R3691 T5502 T5503 mark While,showed
R3692 T5503 T5511 advcl showed,was
R3693 T5504 T5505 det the,behavior
R3694 T5505 T5503 nsubj behavior,showed
R3695 T5506 T5505 amod improved,behavior
R3696 T5507 T5508 nmod odor,discrimination
R3697 T5508 T5505 nmod discrimination,behavior
R3698 T5509 T5508 cc and,discrimination
R3699 T5510 T5508 conj learning,discrimination
R3700 T5512 T5513 advmod only,variability
R3701 T5513 T5503 dobj variability,showed
R3702 T5514 T5513 amod little,variability
R3703 T5515 T5511 punct ", ",was
R3704 T5516 T5517 det the,performance
R3705 T5517 T5511 nsubj performance,was
R3706 T5518 T5519 advmod significantly,impaired
R3707 T5519 T5517 amod impaired,performance
R3708 T5520 T5517 compound memory,performance
R3709 T5521 T5517 acl observed,performance
R3710 T5522 T5521 prep in,observed
R3711 T5523 T5524 compound GluR,BΔFB
R3712 T5524 T5526 compound BΔFB,mice
R3713 T5525 T5524 punct -,BΔFB
R3714 T5526 T5522 pobj mice,in
R3715 T5527 T5528 advmod highly,variable
R3716 T5528 T5511 acomp variable,was
R3717 T5529 T5511 prep among,was
R3718 T5530 T5531 amod individual,animals
R3719 T5531 T5529 pobj animals,among
R3720 T5532 T5511 prep compared,was
R3721 T5533 T5532 prep with,compared
R3722 T5534 T5535 compound control,littermates
R3723 T5535 T5533 pobj littermates,with
R3724 T5536 T5537 punct (,2E
R3725 T5537 T5511 parataxis 2E,was
R3726 T5538 T5537 compound Figure,2E
R3727 T5539 T5537 punct ),2E
R3728 T5540 T5511 punct .,was
R3729 T5542 T5543 det This,variability
R3730 T5543 T5544 nsubjpass variability,reflected
R3731 T5545 T5543 prep in,variability
R3732 T5546 T5547 amod olfactory,memory
R3733 T5547 T5545 pobj memory,in
R3734 T5548 T5544 auxpass was,reflected
R3735 T5549 T5544 prep in,reflected
R3736 T5550 T5551 det the,level
R3737 T5551 T5549 pobj level,in
R3738 T5552 T5551 cc and,level
R3739 T5553 T5551 conj extent,level
R3740 T5554 T5551 prep of,level
R3741 T5555 T5556 compound Cre,recombinase
R3742 T5556 T5558 compound recombinase,expression
R3743 T5557 T5556 punct -,recombinase
R3744 T5558 T5554 pobj expression,of
R3745 T5559 T5544 prep in,reflected
R3746 T5560 T5559 pobj forebrain,in
R3747 T5561 T5560 prep of,forebrain
R3748 T5562 T5563 amod transgenic,mice
R3749 T5563 T5561 pobj mice,of
R3750 T5564 T5563 compound TgCre4,mice
R3751 T5565 T5544 punct ", ",reflected
R3752 T5566 T5567 mark as,visualized
R3753 T5567 T5544 advcl visualized,reflected
R3754 T5568 T5567 prep by,visualized
R3755 T5569 T5570 compound Cre,activity
R3756 T5570 T5568 pobj activity,by
R3757 T5571 T5570 punct -,activity
R3758 T5572 T5567 prep in,visualized
R3759 T5573 T5574 det the,line
R3760 T5574 T5572 pobj line,in
R3761 T5575 T5576 compound Cre,indicator
R3762 T5576 T5574 compound indicator,line
R3763 T5577 T5576 punct -,indicator
R3764 T5578 T5574 compound mouse,line
R3765 T5579 T5574 appos R26R,line
R3766 T5580 T5544 punct .,reflected
R3767 T5582 T5583 nsubj We,observed
R3768 T5584 T5585 mark that,varied
R3770 T5586 T5585 nsubj onset,varied
R3771 T5587 T5586 cc and,onset
R3772 T5588 T5586 conj extent,onset
R3773 T5589 T5586 prep of,onset
R3774 T5590 T5591 compound Cre,recombinase
R3775 T5591 T5593 compound recombinase,expression
R3776 T5592 T5591 punct -,recombinase
R3777 T5593 T5589 pobj expression,of
R3778 T5594 T5593 prep in,expression
R3779 T5595 T5596 amod different,regions
R3780 T5596 T5594 pobj regions,in
R3781 T5597 T5596 compound forebrain,regions
R3782 T5598 T5585 prep among,varied
R3783 T5599 T5600 amod individual,mice
R3784 T5600 T5598 pobj mice,among
R3785 T5601 T5600 compound TgCre4,mice
R3786 T5602 T5603 punct (,3A
R3787 T5603 T5585 parataxis 3A,varied
R3788 T5604 T5603 compound Figure,3A
R3789 T5605 T5603 punct ),3A
R3790 T5606 T5583 punct ", ",observed
R3791 T5607 T5608 dep which,visualized
R3792 T5608 T5583 advcl visualized,observed
R3793 T5609 T5608 aux could,visualized
R3794 T5610 T5608 advmod also,visualized
R3795 T5611 T5608 auxpass be,visualized
R3796 T5612 T5608 advmod directly,visualized
R3797 T5613 T5608 prep by,visualized
R3798 T5614 T5613 pobj immunohistochemistry,by
R3799 T5615 T5608 prep with,visualized
R3800 T5616 T5617 det a,antibody
R3801 T5617 T5615 pobj antibody,with
R3802 T5618 T5617 compound Cre,antibody
R3803 T5619 T5617 punct -,antibody
R3804 T5620 T5621 punct (,data
R3805 T5621 T5583 meta data,observed
R3806 T5622 T5621 amod unpublished,data
R3807 T5623 T5621 punct ),data
R3808 T5624 T5583 punct .,observed
R3809 T5626 T5627 mark As,persisted
R3810 T5627 T5630 advcl persisted,attributed
R3811 T5628 T5629 det this,variability
R3812 T5629 T5627 nsubj variability,persisted
R3813 T5631 T5627 prep after,persisted
R3814 T5632 T5633 amod several,backcrosses
R3815 T5633 T5631 pobj backcrosses,after
R3816 T5634 T5627 punct ", ",persisted
R3817 T5635 T5627 cc and,persisted
R3818 T5636 T5637 compound Southern,blot
R3819 T5637 T5638 compound blot,analysis
R3820 T5638 T5639 nsubj analysis,revealed
R3821 T5639 T5627 conj revealed,persisted
R3822 T5640 T5641 det no,differences
R3823 T5641 T5639 dobj differences,revealed
R3824 T5642 T5641 prep of,differences
R3825 T5643 T5644 compound transgene,integration
R3826 T5644 T5642 pobj integration,of
R3827 T5645 T5644 cc or,integration
R3828 T5646 T5644 conj number,integration
R3829 T5647 T5641 prep among,differences
R3830 T5648 T5647 pobj animals,among
R3831 T5649 T5650 punct (,3B
R3832 T5650 T5639 parataxis 3B,revealed
R3833 T5651 T5650 compound Figure,3B
R3834 T5652 T5650 punct ),3B
R3835 T5653 T5630 punct ", ",attributed
R3836 T5654 T5630 nsubjpass it,attributed
R3837 T5655 T5630 aux could,attributed
R3838 T5656 T5630 neg not,attributed
R3839 T5657 T5630 auxpass be,attributed
R3840 T5658 T5630 prep to,attributed
R3841 T5659 T5660 amod genetic,differences
R3842 T5660 T5658 pobj differences,to
R3843 T5661 T5658 cc but,to
R3844 T5662 T5661 advmod rather,but
R3845 T5663 T5658 conj to,to
R3846 T5664 T5665 amod epigenetic,mechanisms
R3847 T5665 T5663 pobj mechanisms,to
R3848 T5666 T5630 punct .,attributed
R3769 T5585 T5583 ccomp varied,observed

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T5820 43-51 GO:0007612 denotes learning
T5821 52-60 GO_PATO_EXT:biological_behavior denotes behavior
T5822 120-126 GO:0007613 denotes memory
T5823 151-155 GO_EXT:0008066 denotes GluR
T5824 151-157 PR_EXT:000008234 denotes GluR-B
T5825 161-165 NCBITaxon:10088 denotes mice
T5826 203-210 NCBITaxon:33208 denotes animals
T5827 278-287 GO:0007608 denotes olfactory
T5828 288-294 GO:0007613 denotes memory
T5829 340-351 GO_EXT:recombinase denotes recombinase
T5830 352-362 GO:0010467 denotes expression
T5831 366-375 UBERON:0001890 denotes forebrain
T5832 379-389 SO_EXT:transgenic_entity denotes transgenic
T5833 390-392 SO_EXT:transgenic_entity denotes Tg
T5834 397-401 NCBITaxon:10088 denotes mice
T5835 454-459 NCBITaxon:10088 denotes mouse
T5836 512-523 GO_EXT:recombinase denotes recombinase
T5837 524-534 GO:0010467 denotes expression
T5838 548-557 UBERON:0001890 denotes forebrain
T5839 590-592 SO_EXT:transgenic_entity denotes Tg
T5840 597-601 NCBITaxon:10088 denotes mice
T5841 690-698 GO:0042571 denotes antibody
T5842 830-839 SO_EXT:0000902 denotes transgene
T5843 868-875 NCBITaxon:33208 denotes animals
T5844 919-926 SO_EXT:0000704 denotes genetic
T5845 953-963 SO_EXT:epigenetic_modification_entity_or_process denotes epigenetic

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T5752 43-51 GO:0007612 denotes learning
T5753 120-126 GO:0007613 denotes memory
T5754 151-157 PR:000008234 denotes GluR-B
T5755 161-165 NCBITaxon:10088 denotes mice
T5756 203-210 NCBITaxon:33208 denotes animals
T5757 278-287 GO:0007608 denotes olfactory
T5758 288-294 GO:0007613 denotes memory
T5759 352-362 GO:0010467 denotes expression
T5760 366-375 UBERON:0001890 denotes forebrain
T5761 397-401 NCBITaxon:10088 denotes mice
T5762 454-459 NCBITaxon:10088 denotes mouse
T5763 524-534 GO:0010467 denotes expression
T5764 548-557 UBERON:0001890 denotes forebrain
T5765 597-601 NCBITaxon:10088 denotes mice
T5766 690-698 GO:0042571 denotes antibody
T5767 830-839 SO:0000902 denotes transgene
T5768 868-875 NCBITaxon:33208 denotes animals
T5769 919-926 SO:0000704 denotes genetic