> top > docs > PMC:1253828 > spans > 9872-10376 > annotations

PMC:1253828 / 9872-10376 JSONTXT

Annnotations TAB JSON ListView MergeView

craft-sa-dev

Id Subject Object Predicate Lexical cue
T3025 209-210 SYM denotes ′
T3026 210-211 HYPH denotes -
T2931 71-92 NN denotes TTCCGATGTGCCAAGTGTGGC
T2978 0-504 sentence denotes The reactions were carried out using the following primers: Csrp1: 5′-TTCCGATGTGCCAAGTGTGGC-3′; 5′-AGTAGAGAGTGGACATTCAGC-3′, hypoxanthin-guanin-phosphoribosyltransferase (Hprt): 5′-GCTGGTGAAAAGGACCTCTCG-3′; 5′-CCACAGGACTAGGACACCTGC-3′, Mtf1: 5′-GTGACTTTTGAGACTGTACTGAGTG-3′; 5′-CATGCCAAGAAACATTGAAGGTG-3′, Ndrg1: 5′-AGATACACAACAACGTGGAGG-3′; 5′-TGTGCGAGCGGCTTCGGGGGC-3′, Sepw1: 5′-TAGAGGCAGGGTCCTGAAAGC-3′; 5′-ACACCTGGAAACATGGCTGCC-3′, Slc39a10: 5′-GCTGTGGCTGGTAGTAAAAGC-3′; 5′-GTGGCATGGGATGTAAACAGC-3′.
T2979 1-4 DT denotes The
T2980 5-14 NNS denotes reactions
T2981 20-27 VBN denotes carried
T2982 15-19 VBD denotes were
T2983 28-31 RP denotes out
T2984 32-37 VBG denotes using
T2985 38-41 DT denotes the
T2986 52-59 NNS denotes primers
T2987 42-51 VBG denotes following
T2988 59-61 : denotes :
T2989 61-66 NN denotes Csrp1
T2990 66-68 : denotes :
T2991 68-69 CD denotes 5
T2992 69-70 SYM denotes ′
T2993 70-71 HYPH denotes -
T2994 92-93 HYPH denotes -
T2995 93-94 CD denotes 3
T2996 94-95 SYM denotes ′
T2997 95-96 : denotes ;
T2998 97-98 CD denotes 5
T2999 100-121 NN denotes AGTAGAGAGTGGACATTCAGC
T3000 98-99 SYM denotes ′
T3001 99-100 HYPH denotes -
T3002 121-122 HYPH denotes -
T3003 122-123 CD denotes 3
T3004 123-124 SYM denotes ′
T3005 124-126 , denotes ,
T3006 126-137 NN denotes hypoxanthin
T3007 145-170 NN denotes phosphoribosyltransferase
T3008 137-138 HYPH denotes -
T3009 138-144 NN denotes guanin
T3010 144-145 HYPH denotes -
T3011 171-172 -LRB- denotes (
T3012 172-176 NN denotes Hprt
T3013 176-177 -RRB- denotes )
T3014 177-179 : denotes :
T3015 179-180 CD denotes 5
T3016 182-203 NN denotes GCTGGTGAAAAGGACCTCTCG
T3017 180-181 SYM denotes ′
T3018 181-182 HYPH denotes -
T3019 203-204 HYPH denotes -
T3020 204-205 CD denotes 3
T3021 205-206 SYM denotes ′
T3022 206-207 : denotes ;
T3023 208-209 CD denotes 5
T3024 211-232 NN denotes CCACAGGACTAGGACACCTGC
T3027 232-233 HYPH denotes -
T3028 233-234 CD denotes 3
T3029 234-235 SYM denotes ′
T3030 235-237 , denotes ,
T3031 237-241 NN denotes Mtf1
T3032 241-243 : denotes :
T3033 243-244 CD denotes 5
T3034 246-271 NN denotes GTGACTTTTGAGACTGTACTGAGTG
T3035 244-245 SYM denotes ′
T3036 245-246 HYPH denotes -
T3037 271-272 HYPH denotes -
T3038 272-273 CD denotes 3
T3039 273-274 SYM denotes ′
T3040 274-275 : denotes ;
T3041 276-277 CD denotes 5
T3042 279-302 NN denotes CATGCCAAGAAACATTGAAGGTG
T3043 277-278 SYM denotes ′
T3044 278-279 HYPH denotes -
T3045 302-303 HYPH denotes -
T3046 303-304 CD denotes 3
T3047 304-305 SYM denotes ′
T3048 305-307 , denotes ,
T3049 307-312 NN denotes Ndrg1
T3050 312-314 : denotes :
T3051 314-315 CD denotes 5
T3052 317-338 NN denotes AGATACACAACAACGTGGAGG
T3053 315-316 SYM denotes ′
T3054 316-317 HYPH denotes -
T3055 338-339 HYPH denotes -
T3056 339-340 CD denotes 3
T3057 340-341 SYM denotes ′
T3058 341-342 : denotes ;
T3059 343-344 CD denotes 5
T3060 346-367 NN denotes TGTGCGAGCGGCTTCGGGGGC
T3061 344-345 SYM denotes ′
T3062 345-346 HYPH denotes -
T3063 367-368 HYPH denotes -
T3064 368-369 CD denotes 3
T3065 369-370 SYM denotes ′
T3066 370-372 , denotes ,
T3067 372-377 NN denotes Sepw1
T3068 377-379 : denotes :
T3069 379-380 CD denotes 5
T3070 382-403 NN denotes TAGAGGCAGGGTCCTGAAAGC
T3071 380-381 SYM denotes ′
T3072 381-382 HYPH denotes -
T3073 403-404 HYPH denotes -
T3074 404-405 CD denotes 3
T3075 405-406 SYM denotes ′
T3076 406-407 : denotes ;
T3077 408-409 CD denotes 5
T3078 411-432 NN denotes ACACCTGGAAACATGGCTGCC
T3079 409-410 SYM denotes ′
T3080 410-411 HYPH denotes -
T3081 432-433 HYPH denotes -
T3082 433-434 CD denotes 3
T3083 434-435 SYM denotes ′
T3084 435-437 , denotes ,
T3085 437-445 NN denotes Slc39a10
T3086 445-447 : denotes :
T3087 447-448 CD denotes 5
T3088 450-471 NN denotes GCTGTGGCTGGTAGTAAAAGC
T3089 448-449 SYM denotes ′
T3090 449-450 HYPH denotes -
T3091 471-472 HYPH denotes -
T3092 472-473 CD denotes 3
T3093 473-474 SYM denotes ′
T3094 474-475 : denotes ;
T3095 476-477 CD denotes 5
T3096 479-500 NN denotes GTGGCATGGGATGTAAACAGC
T3097 477-478 SYM denotes ′
T3098 478-479 HYPH denotes -
T3099 500-501 HYPH denotes -
T3100 501-502 CD denotes 3
T3101 502-503 SYM denotes ′
T3102 503-504 . denotes .
R1842 T2931 T2989 appos TTCCGATGTGCCAAGTGTGGC,Csrp1
R1886 T2979 T2980 det The,reactions
R1887 T2980 T2981 nsubjpass reactions,carried
R1888 T2982 T2981 auxpass were,carried
R1889 T2983 T2981 prt out,carried
R1890 T2984 T2981 advcl using,carried
R1891 T2985 T2986 det the,primers
R1892 T2986 T2984 dobj primers,using
R1893 T2987 T2986 amod following,primers
R1894 T2988 T2986 punct : ,primers
R1895 T2989 T2986 appos Csrp1,primers
R1896 T2990 T2989 punct : ,Csrp1
R1897 T2991 T2931 nummod 5,TTCCGATGTGCCAAGTGTGGC
R1898 T2992 T2991 punct ′,5
R1899 T2993 T2931 punct -,TTCCGATGTGCCAAGTGTGGC
R1900 T2994 T2931 punct -,TTCCGATGTGCCAAGTGTGGC
R1901 T2995 T2931 nummod 3,TTCCGATGTGCCAAGTGTGGC
R1902 T2996 T2931 punct ′,TTCCGATGTGCCAAGTGTGGC
R1903 T2997 T2931 punct ;,TTCCGATGTGCCAAGTGTGGC
R1904 T2998 T2999 nummod 5,AGTAGAGAGTGGACATTCAGC
R1905 T2999 T2931 appos AGTAGAGAGTGGACATTCAGC,TTCCGATGTGCCAAGTGTGGC
R1906 T3000 T2998 punct ′,5
R1907 T3001 T2999 punct -,AGTAGAGAGTGGACATTCAGC
R1908 T3002 T2999 punct -,AGTAGAGAGTGGACATTCAGC
R1909 T3003 T2999 nummod 3,AGTAGAGAGTGGACATTCAGC
R1910 T3004 T2999 punct ′,AGTAGAGAGTGGACATTCAGC
R1911 T3005 T2989 punct ", ",Csrp1
R1912 T3006 T3007 compound hypoxanthin,phosphoribosyltransferase
R1913 T3007 T2989 appos phosphoribosyltransferase,Csrp1
R1914 T3008 T3007 punct -,phosphoribosyltransferase
R1915 T3009 T3007 compound guanin,phosphoribosyltransferase
R1916 T3010 T3007 punct -,phosphoribosyltransferase
R1917 T3011 T3007 punct (,phosphoribosyltransferase
R1918 T3012 T3007 appos Hprt,phosphoribosyltransferase
R1919 T3013 T3007 punct ),phosphoribosyltransferase
R1920 T3014 T3007 punct : ,phosphoribosyltransferase
R1921 T3015 T3016 nummod 5,GCTGGTGAAAAGGACCTCTCG
R1922 T3016 T3007 appos GCTGGTGAAAAGGACCTCTCG,phosphoribosyltransferase
R1923 T3017 T3015 punct ′,5
R1924 T3018 T3016 punct -,GCTGGTGAAAAGGACCTCTCG
R1925 T3019 T3016 punct -,GCTGGTGAAAAGGACCTCTCG
R1926 T3020 T3016 nummod 3,GCTGGTGAAAAGGACCTCTCG
R1927 T3021 T3016 punct ′,GCTGGTGAAAAGGACCTCTCG
R1928 T3022 T3016 punct ;,GCTGGTGAAAAGGACCTCTCG
R1929 T3023 T3024 nummod 5,CCACAGGACTAGGACACCTGC
R1930 T3024 T3016 appos CCACAGGACTAGGACACCTGC,GCTGGTGAAAAGGACCTCTCG
R1931 T3025 T3023 punct ′,5
R1932 T3026 T3024 punct -,CCACAGGACTAGGACACCTGC
R1933 T3027 T3024 punct -,CCACAGGACTAGGACACCTGC
R1934 T3028 T3024 nummod 3,CCACAGGACTAGGACACCTGC
R1935 T3029 T3024 punct ′,CCACAGGACTAGGACACCTGC
R1936 T3030 T2989 punct ", ",Csrp1
R1937 T3031 T2989 appos Mtf1,Csrp1
R1938 T3032 T3031 punct : ,Mtf1
R1939 T3033 T3034 nummod 5,GTGACTTTTGAGACTGTACTGAGTG
R1940 T3034 T3031 appos GTGACTTTTGAGACTGTACTGAGTG,Mtf1
R1941 T3035 T3033 punct ′,5
R1942 T3036 T3034 punct -,GTGACTTTTGAGACTGTACTGAGTG
R1943 T3037 T3034 punct -,GTGACTTTTGAGACTGTACTGAGTG
R1944 T3038 T3034 nummod 3,GTGACTTTTGAGACTGTACTGAGTG
R1945 T3039 T3034 punct ′,GTGACTTTTGAGACTGTACTGAGTG
R1946 T3040 T3034 punct ;,GTGACTTTTGAGACTGTACTGAGTG
R1947 T3041 T3042 nummod 5,CATGCCAAGAAACATTGAAGGTG
R1948 T3042 T3034 appos CATGCCAAGAAACATTGAAGGTG,GTGACTTTTGAGACTGTACTGAGTG
R1949 T3043 T3041 punct ′,5
R1950 T3044 T3042 punct -,CATGCCAAGAAACATTGAAGGTG
R1951 T3045 T3042 punct -,CATGCCAAGAAACATTGAAGGTG
R1952 T3046 T3042 nummod 3,CATGCCAAGAAACATTGAAGGTG
R1953 T3047 T3042 punct ′,CATGCCAAGAAACATTGAAGGTG
R1954 T3048 T2989 punct ", ",Csrp1
R1955 T3049 T2989 appos Ndrg1,Csrp1
R1956 T3050 T3049 punct : ,Ndrg1
R1957 T3051 T3052 nummod 5,AGATACACAACAACGTGGAGG
R1958 T3052 T3049 appos AGATACACAACAACGTGGAGG,Ndrg1
R1959 T3053 T3051 punct ′,5
R1960 T3054 T3052 punct -,AGATACACAACAACGTGGAGG
R1961 T3055 T3052 punct -,AGATACACAACAACGTGGAGG
R1962 T3056 T3052 nummod 3,AGATACACAACAACGTGGAGG
R1963 T3057 T3052 punct ′,AGATACACAACAACGTGGAGG
R1964 T3058 T3052 punct ;,AGATACACAACAACGTGGAGG
R1965 T3059 T3060 nummod 5,TGTGCGAGCGGCTTCGGGGGC
R1966 T3060 T3052 appos TGTGCGAGCGGCTTCGGGGGC,AGATACACAACAACGTGGAGG
R1967 T3061 T3059 punct ′,5
R1968 T3062 T3060 punct -,TGTGCGAGCGGCTTCGGGGGC
R1969 T3063 T3060 punct -,TGTGCGAGCGGCTTCGGGGGC
R1970 T3064 T3060 nummod 3,TGTGCGAGCGGCTTCGGGGGC
R1971 T3065 T3060 punct ′,TGTGCGAGCGGCTTCGGGGGC
R1972 T3066 T2989 punct ", ",Csrp1
R1973 T3067 T2989 appos Sepw1,Csrp1
R1974 T3068 T3067 punct : ,Sepw1
R1975 T3069 T3070 nummod 5,TAGAGGCAGGGTCCTGAAAGC
R1976 T3070 T3067 appos TAGAGGCAGGGTCCTGAAAGC,Sepw1
R1977 T3071 T3069 punct ′,5
R1978 T3072 T3070 punct -,TAGAGGCAGGGTCCTGAAAGC
R1979 T3073 T3070 punct -,TAGAGGCAGGGTCCTGAAAGC
R1980 T3074 T3070 nummod 3,TAGAGGCAGGGTCCTGAAAGC
R1981 T3075 T3070 punct ′,TAGAGGCAGGGTCCTGAAAGC
R1982 T3076 T3070 punct ;,TAGAGGCAGGGTCCTGAAAGC
R1983 T3077 T3078 nummod 5,ACACCTGGAAACATGGCTGCC
R1984 T3078 T3070 appos ACACCTGGAAACATGGCTGCC,TAGAGGCAGGGTCCTGAAAGC
R1985 T3079 T3077 punct ′,5
R1986 T3080 T3078 punct -,ACACCTGGAAACATGGCTGCC
R1987 T3081 T3078 punct -,ACACCTGGAAACATGGCTGCC
R1988 T3082 T3078 nummod 3,ACACCTGGAAACATGGCTGCC
R1989 T3083 T3078 punct ′,ACACCTGGAAACATGGCTGCC
R1990 T3084 T2989 punct ", ",Csrp1
R1991 T3085 T2989 appos Slc39a10,Csrp1
R1992 T3086 T3085 punct : ,Slc39a10
R1993 T3087 T3088 nummod 5,GCTGTGGCTGGTAGTAAAAGC
R1994 T3088 T3085 appos GCTGTGGCTGGTAGTAAAAGC,Slc39a10
R1995 T3089 T3087 punct ′,5
R1996 T3090 T3088 punct -,GCTGTGGCTGGTAGTAAAAGC
R1997 T3091 T3088 punct -,GCTGTGGCTGGTAGTAAAAGC
R1998 T3092 T3088 nummod 3,GCTGTGGCTGGTAGTAAAAGC
R1999 T3093 T3088 punct ′,GCTGTGGCTGGTAGTAAAAGC
R2000 T3094 T3088 punct ;,GCTGTGGCTGGTAGTAAAAGC
R2001 T3095 T3096 nummod 5,GTGGCATGGGATGTAAACAGC
R2002 T3096 T3088 appos GTGGCATGGGATGTAAACAGC,GCTGTGGCTGGTAGTAAAAGC
R2003 T3097 T3095 punct ′,5
R2004 T3098 T3096 punct -,GTGGCATGGGATGTAAACAGC
R2005 T3099 T3096 punct -,GTGGCATGGGATGTAAACAGC
R2006 T3100 T3096 nummod 3,GTGGCATGGGATGTAAACAGC
R2007 T3101 T3096 punct ′,GTGGCATGGGATGTAAACAGC
R2008 T3102 T2981 punct .,carried

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T3103 52-59 SO:0000112 denotes primers
T3104 61-66 PR:000005958 denotes Csrp1
T3105 126-137 CHEBI:17368 denotes hypoxanthin
T3106 237-241 PR:000010717 denotes Mtf1
T3107 307-312 PR:000011059 denotes Ndrg1
T3108 372-377 PR:000014662 denotes Sepw1
T3109 437-445 PR:000015124 denotes Slc39a10

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T3116 52-59 SO_EXT:0000112 denotes primers
T3117 61-66 PR_EXT:000005958 denotes Csrp1
T3118 126-137 CHEBI:17368 denotes hypoxanthin
T3119 126-170 GO_PR_EXT:hypoxanthine_guanine_phosphoribosyltransferase denotes hypoxanthin-guanin-phosphoribosyltransferase
T3120 138-144 CHEBI_EXT:guanine_nucleobase_or_nucleoside_or_nucleotide_molecular_entity_or_group denotes guanin
T3121 172-176 GO_PR_EXT:hypoxanthine_guanine_phosphoribosyltransferase denotes Hprt
T3122 237-241 PR_EXT:000010717 denotes Mtf1
T3123 307-312 PR_EXT:000011059 denotes Ndrg1
T3124 372-377 PR_EXT:000014662 denotes Sepw1
T3125 437-445 PR_EXT:000015124 denotes Slc39a10