> top > docs > PMC:1253828 > spans > 4600-4965 > annotations

PMC:1253828 / 4600-4965 JSONTXT

Annnotations TAB JSON ListView MergeView

craft-sa-dev

Id Subject Object Predicate Lexical cue
T1555 0-365 sentence denotes Besides the stress-inducible metallothionein genes that were already known as target genes of MTF-1, we find that MTF-1 is important for basal liver expression of the gene for selenoprotein W, muscle 1 (Sepw1) as well as for cadmium-induced expression of N-myc downstream regulated gene 1 (Ndrg1) and the gene encoding cysteine- and glycine-rich protein 1 (Csrp1).
T1556 1-8 IN denotes Besides
T1557 105-109 VBP denotes find
T1558 9-12 DT denotes the
T1559 46-51 NNS denotes genes
T1560 13-19 NN denotes stress
T1561 20-29 JJ denotes inducible
T1562 19-20 HYPH denotes -
T1563 30-45 NN denotes metallothionein
T1564 52-56 WDT denotes that
T1565 70-75 VBN denotes known
T1566 57-61 VBD denotes were
T1567 62-69 RB denotes already
T1568 76-78 IN denotes as
T1569 79-85 NN denotes target
T1570 86-91 NNS denotes genes
T1571 92-94 IN denotes of
T1572 95-98 NN denotes MTF
T1573 98-99 HYPH denotes -
T1574 99-100 CD denotes 1
T1575 100-102 , denotes ,
T1576 102-104 PRP denotes we
T1577 110-114 IN denotes that
T1578 121-123 VBZ denotes is
T1579 115-118 NN denotes MTF
T1580 118-119 HYPH denotes -
T1581 119-120 CD denotes 1
T1582 124-133 JJ denotes important
T1583 134-137 IN denotes for
T1584 138-143 JJ denotes basal
T1585 150-160 NN denotes expression
T1586 144-149 NN denotes liver
T1587 161-163 IN denotes of
T1588 164-167 DT denotes the
T1589 168-172 NN denotes gene
T1590 173-176 IN denotes for
T1591 177-190 NN denotes selenoprotein
T1592 194-200 NN denotes muscle
T1593 191-192 NN denotes W
T1594 192-194 , denotes ,
T1595 201-202 CD denotes 1
T1596 203-204 -LRB- denotes (
T1597 204-209 NN denotes Sepw1
T1598 209-210 -RRB- denotes )
T1599 211-213 RB denotes as
T1600 219-221 IN denotes as
T1601 214-218 RB denotes well
T1602 222-225 IN denotes for
T1603 226-233 NN denotes cadmium
T1604 234-241 VBN denotes induced
T1605 233-234 HYPH denotes -
T1606 242-252 NN denotes expression
T1607 253-255 IN denotes of
T1608 256-257 NN denotes N
T1609 258-261 NN denotes myc
T1610 257-258 HYPH denotes -
T1611 283-287 NN denotes gene
T1612 262-272 RB denotes downstream
T1613 273-282 VBN denotes regulated
T1614 288-289 CD denotes 1
T1615 290-291 -LRB- denotes (
T1616 291-296 NN denotes Ndrg1
T1617 296-297 -RRB- denotes )
T1618 298-301 CC denotes and
T1619 302-305 DT denotes the
T1620 306-310 NN denotes gene
T1621 311-319 VBG denotes encoding
T1622 320-328 NN denotes cysteine
T1623 342-346 JJ denotes rich
T1624 328-329 HYPH denotes -
T1625 330-333 CC denotes and
T1626 334-341 NN denotes glycine
T1627 341-342 HYPH denotes -
T1628 347-354 NN denotes protein
T1629 355-356 CD denotes 1
T1630 357-358 -LRB- denotes (
T1631 358-363 NN denotes Csrp1
T1632 363-364 -RRB- denotes )
T1633 364-365 . denotes .
R881 T1556 T1557 prep Besides,find
R882 T1558 T1559 det the,genes
R883 T1559 T1556 pobj genes,Besides
R884 T1560 T1561 npadvmod stress,inducible
R885 T1561 T1559 amod inducible,genes
R886 T1562 T1561 punct -,inducible
R887 T1563 T1559 compound metallothionein,genes
R888 T1564 T1565 dep that,known
R889 T1565 T1559 relcl known,genes
R890 T1566 T1565 auxpass were,known
R891 T1567 T1565 advmod already,known
R892 T1568 T1565 prep as,known
R893 T1569 T1570 compound target,genes
R894 T1570 T1568 pobj genes,as
R895 T1571 T1570 prep of,genes
R896 T1572 T1571 pobj MTF,of
R897 T1573 T1572 punct -,MTF
R898 T1574 T1572 nummod 1,MTF
R899 T1575 T1557 punct ", ",find
R900 T1576 T1557 nsubj we,find
R901 T1577 T1578 mark that,is
R902 T1578 T1557 ccomp is,find
R903 T1579 T1578 nsubj MTF,is
R904 T1580 T1579 punct -,MTF
R905 T1581 T1579 nummod 1,MTF
R906 T1582 T1578 acomp important,is
R907 T1583 T1582 prep for,important
R908 T1584 T1585 amod basal,expression
R909 T1585 T1583 pobj expression,for
R910 T1586 T1585 compound liver,expression
R911 T1587 T1585 prep of,expression
R912 T1588 T1589 det the,gene
R913 T1589 T1587 pobj gene,of
R914 T1590 T1589 prep for,gene
R915 T1591 T1592 nmod selenoprotein,muscle
R916 T1592 T1590 pobj muscle,for
R917 T1593 T1592 nmod W,muscle
R918 T1594 T1592 punct ", ",muscle
R919 T1595 T1592 nummod 1,muscle
R920 T1596 T1592 punct (,muscle
R921 T1597 T1592 appos Sepw1,muscle
R922 T1598 T1590 punct ),for
R923 T1599 T1600 advmod as,as
R924 T1600 T1590 cc as,for
R925 T1601 T1600 advmod well,as
R926 T1602 T1590 conj for,for
R927 T1603 T1604 npadvmod cadmium,induced
R928 T1604 T1606 amod induced,expression
R929 T1605 T1604 punct -,induced
R930 T1606 T1602 pobj expression,for
R931 T1607 T1606 prep of,expression
R932 T1608 T1609 nmod N,myc
R933 T1609 T1611 nmod myc,gene
R934 T1610 T1609 punct -,myc
R935 T1611 T1607 pobj gene,of
R936 T1612 T1613 advmod downstream,regulated
R937 T1613 T1611 amod regulated,gene
R938 T1614 T1611 nummod 1,gene
R939 T1615 T1611 punct (,gene
R940 T1616 T1611 appos Ndrg1,gene
R941 T1617 T1611 punct ),gene
R942 T1618 T1611 cc and,gene
R943 T1619 T1620 det the,gene
R944 T1620 T1611 conj gene,gene
R945 T1621 T1620 acl encoding,gene
R946 T1622 T1623 npadvmod cysteine,rich
R947 T1623 T1628 amod rich,protein
R948 T1624 T1622 punct -,cysteine
R949 T1625 T1622 cc and,cysteine
R950 T1626 T1622 conj glycine,cysteine
R951 T1627 T1623 punct -,rich
R952 T1628 T1621 dobj protein,encoding
R953 T1629 T1628 nummod 1,protein
R954 T1630 T1628 punct (,protein
R955 T1631 T1628 appos Csrp1,protein
R956 T1632 T1557 punct ),find
R957 T1633 T1557 punct .,find

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T784 46-51 SO:0000704 denotes genes
T785 86-91 SO:0000704 denotes genes
T786 95-100 PR:000010717 denotes MTF-1
T787 115-120 PR:000010717 denotes MTF-1
T788 144-149 UBERON:0002107 denotes liver
T789 150-160 GO:0010467 denotes expression
T790 168-172 SO:0000704 denotes gene
T791 177-202 PR:000014662 denotes selenoprotein W, muscle 1
T792 204-209 PR:000014662 denotes Sepw1
T793 242-252 GO:0010467 denotes expression
T794 256-289 PR:000011059 denotes N-myc downstream regulated gene 1
T795 273-282 GO:0065007 denotes regulated
T796 283-287 SO:0000704 denotes gene
T797 291-296 PR:000011059 denotes Ndrg1
T798 306-310 SO:0000704 denotes gene
T799 320-356 PR:000005958 denotes cysteine- and glycine-rich protein 1
T800 358-363 PR:000005958 denotes Csrp1

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T935 46-51 SO_EXT:0000704 denotes genes
T936 86-91 SO_EXT:0000704 denotes genes
T937 95-100 PR_EXT:000010717 denotes MTF-1
T938 115-120 PR_EXT:000010717 denotes MTF-1
T939 144-149 UBERON:0002107 denotes liver
T940 150-160 GO:0010467 denotes expression
T941 168-172 SO_EXT:0000704 denotes gene
T942 177-190 CHEBI_EXT:selenoprotein denotes selenoprotein
T943 177-202 PR_EXT:000014662 denotes selenoprotein W, muscle 1
T944 194-200 UBERON_EXT:muscle_structure_or_tissue denotes muscle
T945 204-209 PR_EXT:000014662 denotes Sepw1
T946 226-233 CHEBI_EXT:cadmium denotes cadmium
T947 242-252 GO:0010467 denotes expression
T948 256-289 PR_EXT:000011059 denotes N-myc downstream regulated gene 1
T949 273-282 GO:0065007 denotes regulated
T950 283-287 SO_EXT:0000704 denotes gene
T951 291-296 PR_EXT:000011059 denotes Ndrg1
T952 306-310 SO_EXT:0000704 denotes gene
T953 311-319 SO_EXT:sequence_coding_function denotes encoding
T954 320-328 CHEBI_SO_EXT:cysteine denotes cysteine
T955 320-356 PR_EXT:000005958 denotes cysteine- and glycine-rich protein 1
T956 334-341 CHEBI_SO_EXT:glycine denotes glycine
T957 347-354 CHEBI_PR_EXT:protein denotes protein
T958 358-363 PR_EXT:000005958 denotes Csrp1