PMC:1253828 / 28194-28646
Annnotations
craft-sa-dev
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T8565 | 0-7 | IN | denotes | Besides |
T8566 | 90-101 | VBN | denotes | upregulated |
T8567 | 8-13 | NNS | denotes | genes |
T8568 | 14-21 | VBN | denotes | related |
T8569 | 22-24 | IN | denotes | to |
T8570 | 25-28 | DT | denotes | the |
T8571 | 41-48 | NN | denotes | pathway |
T8572 | 29-40 | NN | denotes | glutathione |
T8573 | 48-50 | , | denotes | , |
T8574 | 50-57 | JJ | denotes | several |
T8575 | 79-84 | NNS | denotes | genes |
T8576 | 58-63 | JJ | denotes | other |
T8577 | 64-70 | NN | denotes | stress |
T8578 | 71-78 | VBN | denotes | related |
T8579 | 70-71 | HYPH | denotes | - |
T8580 | 85-89 | VBD | denotes | were |
T8581 | 102-106 | IN | denotes | upon |
T8582 | 107-114 | NN | denotes | cadmium |
T8583 | 115-123 | NN | denotes | exposure |
T8584 | 123-125 | , | denotes | , |
T8585 | 125-134 | VBG | denotes | including |
T8586 | 135-140 | NNS | denotes | genes |
T8587 | 141-144 | IN | denotes | for |
T8588 | 145-156 | NN | denotes | thioredoxin |
T8589 | 157-166 | NN | denotes | reductase |
T8590 | 167-168 | CD | denotes | 1 |
T8591 | 169-170 | -LRB- | denotes | ( |
T8592 | 170-176 | NN | denotes | Txnrd1 |
T8593 | 176-177 | -RRB- | denotes | ) |
T8594 | 177-179 | , | denotes | , |
T8595 | 179-182 | CD | denotes | one |
T8596 | 183-185 | IN | denotes | of |
T8597 | 186-189 | DT | denotes | the |
T8598 | 199-206 | NNS | denotes | enzymes |
T8599 | 190-198 | VBG | denotes | reducing |
T8600 | 207-209 | IN | denotes | of |
T8601 | 210-213 | DT | denotes | the |
T8602 | 226-237 | NN | denotes | thioredoxin |
T8603 | 214-225 | NN | denotes | antioxidant |
T8604 | 238-239 | -LRB- | denotes | ( |
T8605 | 239-241 | CD | denotes | 46 |
T8606 | 241-242 | -RRB- | denotes | ) |
T8607 | 242-243 | : | denotes | ; |
T8608 | 244-248 | NN | denotes | KDEL |
T8609 | 289-297 | NN | denotes | receptor |
T8610 | 249-260 | JJ | denotes | endoplasmic |
T8611 | 261-270 | NN | denotes | reticulum |
T8612 | 271-278 | NN | denotes | protein |
T8613 | 279-288 | NN | denotes | retention |
T8614 | 298-299 | CD | denotes | 2 |
T8615 | 300-301 | -LRB- | denotes | ( |
T8616 | 301-307 | NN | denotes | Kdelr2 |
T8617 | 307-308 | -RRB- | denotes | ) |
T8618 | 309-322 | VBG | denotes | participating |
T8619 | 323-325 | IN | denotes | in |
T8620 | 326-328 | NN | denotes | ER |
T8621 | 336-344 | NN | denotes | response |
T8622 | 329-335 | NN | denotes | stress |
T8623 | 345-346 | -LRB- | denotes | ( |
T8624 | 346-348 | CD | denotes | 47 |
T8625 | 348-349 | -RRB- | denotes | ) |
T8626 | 349-350 | : | denotes | ; |
T8627 | 351-354 | CC | denotes | and |
T8628 | 355-358 | DT | denotes | the |
T8629 | 390-400 | NN | denotes | athanogene |
T8630 | 359-373 | JJ | denotes | anti-apoptotic |
T8631 | 374-378 | NN | denotes | Bcl2 |
T8632 | 378-379 | HYPH | denotes | - |
T8633 | 379-389 | VBN | denotes | associated |
T8634 | 401-402 | CD | denotes | 3 |
T8635 | 403-404 | -LRB- | denotes | ( |
T8636 | 404-408 | NN | denotes | Bag3 |
T8637 | 408-409 | -RRB- | denotes | ) |
T8638 | 410-418 | VBN | denotes | involved |
T8639 | 419-421 | IN | denotes | in |
T8640 | 422-428 | NN | denotes | stress |
T8641 | 429-436 | VBN | denotes | induced |
T8642 | 428-429 | HYPH | denotes | - |
T8643 | 437-446 | NN | denotes | apoptosis |
T8644 | 447-448 | -LRB- | denotes | ( |
T8645 | 448-450 | CD | denotes | 48 |
T8646 | 450-451 | -RRB- | denotes | ) |
T8647 | 451-452 | . | denotes | . |
R5465 | T8565 | T8566 | prep | Besides,upregulated |
R5466 | T8567 | T8565 | pobj | genes,Besides |
R5467 | T8568 | T8567 | acl | related,genes |
R5468 | T8569 | T8568 | prep | to,related |
R5469 | T8570 | T8571 | det | the,pathway |
R5470 | T8571 | T8569 | pobj | pathway,to |
R5471 | T8572 | T8571 | compound | glutathione,pathway |
R5472 | T8573 | T8566 | punct | ", ",upregulated |
R5473 | T8574 | T8575 | amod | several,genes |
R5474 | T8575 | T8566 | nsubjpass | genes,upregulated |
R5475 | T8576 | T8575 | amod | other,genes |
R5476 | T8577 | T8578 | npadvmod | stress,related |
R5477 | T8578 | T8575 | amod | related,genes |
R5478 | T8579 | T8578 | punct | -,related |
R5479 | T8580 | T8566 | auxpass | were,upregulated |
R5480 | T8581 | T8566 | prep | upon,upregulated |
R5481 | T8582 | T8583 | compound | cadmium,exposure |
R5482 | T8583 | T8581 | pobj | exposure,upon |
R5483 | T8584 | T8566 | punct | ", ",upregulated |
R5484 | T8585 | T8566 | prep | including,upregulated |
R5485 | T8586 | T8585 | pobj | genes,including |
R5486 | T8587 | T8586 | prep | for,genes |
R5487 | T8588 | T8589 | compound | thioredoxin,reductase |
R5488 | T8589 | T8587 | pobj | reductase,for |
R5489 | T8590 | T8589 | nummod | 1,reductase |
R5490 | T8591 | T8589 | punct | (,reductase |
R5491 | T8592 | T8589 | appos | Txnrd1,reductase |
R5492 | T8593 | T8589 | punct | ),reductase |
R5493 | T8594 | T8589 | punct | ", ",reductase |
R5494 | T8595 | T8589 | appos | one,reductase |
R5495 | T8596 | T8595 | prep | of,one |
R5496 | T8597 | T8598 | det | the,enzymes |
R5497 | T8598 | T8596 | pobj | enzymes,of |
R5498 | T8599 | T8598 | amod | reducing,enzymes |
R5499 | T8600 | T8595 | prep | of,one |
R5500 | T8601 | T8602 | det | the,thioredoxin |
R5501 | T8602 | T8600 | pobj | thioredoxin,of |
R5502 | T8603 | T8602 | compound | antioxidant,thioredoxin |
R5503 | T8604 | T8605 | punct | (,46 |
R5504 | T8605 | T8602 | parataxis | 46,thioredoxin |
R5505 | T8606 | T8605 | punct | ),46 |
R5506 | T8607 | T8589 | punct | ;,reductase |
R5507 | T8608 | T8609 | nmod | KDEL,receptor |
R5508 | T8609 | T8589 | conj | receptor,reductase |
R5509 | T8610 | T8609 | amod | endoplasmic,receptor |
R5510 | T8611 | T8609 | compound | reticulum,receptor |
R5511 | T8612 | T8609 | compound | protein,receptor |
R5512 | T8613 | T8609 | compound | retention,receptor |
R5513 | T8614 | T8609 | nummod | 2,receptor |
R5514 | T8615 | T8609 | punct | (,receptor |
R5515 | T8616 | T8609 | appos | Kdelr2,receptor |
R5516 | T8617 | T8609 | punct | ),receptor |
R5517 | T8618 | T8609 | acl | participating,receptor |
R5518 | T8619 | T8618 | prep | in,participating |
R5519 | T8620 | T8621 | compound | ER,response |
R5520 | T8621 | T8619 | pobj | response,in |
R5521 | T8622 | T8621 | compound | stress,response |
R5522 | T8623 | T8624 | punct | (,47 |
R5523 | T8624 | T8621 | parataxis | 47,response |
R5524 | T8625 | T8624 | punct | ),47 |
R5525 | T8626 | T8609 | punct | ;,receptor |
R5526 | T8627 | T8609 | cc | and,receptor |
R5527 | T8628 | T8629 | det | the,athanogene |
R5528 | T8629 | T8609 | conj | athanogene,receptor |
R5529 | T8630 | T8629 | amod | anti-apoptotic,athanogene |
R5530 | T8631 | T8629 | nmod | Bcl2,athanogene |
R5531 | T8632 | T8629 | punct | -,athanogene |
R5532 | T8633 | T8629 | amod | associated,athanogene |
R5533 | T8634 | T8629 | nummod | 3,athanogene |
R5534 | T8635 | T8629 | punct | (,athanogene |
R5535 | T8636 | T8629 | appos | Bag3,athanogene |
R5536 | T8637 | T8629 | punct | ),athanogene |
R5537 | T8638 | T8629 | acl | involved,athanogene |
R5538 | T8639 | T8638 | prep | in,involved |
R5539 | T8640 | T8641 | npadvmod | stress,induced |
R5540 | T8641 | T8643 | amod | induced,apoptosis |
R5541 | T8642 | T8641 | punct | -,induced |
R5542 | T8643 | T8639 | pobj | apoptosis,in |
R5543 | T8644 | T8645 | punct | (,48 |
R5544 | T8645 | T8643 | parataxis | 48,apoptosis |
R5545 | T8646 | T8645 | punct | ),48 |
R5546 | T8647 | T8566 | punct | .,upregulated |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
16221973-14980055-77403442 | 239-241 | 14980055 | denotes | 46 |
16221973-12821650-77403443 | 346-348 | 12821650 | denotes | 47 |
16221973-14628070-77403444 | 448-450 | 14628070 | denotes | 48 |
craft-ca-core-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7957 | 8-13 | SO:0000704 | denotes | genes |
T7958 | 29-40 | CHEBI:16856 | denotes | glutathione |
T7959 | 79-84 | SO:0000704 | denotes | genes |
T7960 | 135-140 | SO:0000704 | denotes | genes |
T7961 | 145-168 | PR:000016871 | denotes | thioredoxin reductase 1 |
T7962 | 170-176 | PR:000016871 | denotes | Txnrd1 |
T7963 | 190-198 | MOP:0000569 | denotes | reducing |
T7964 | 244-299 | PR:000009274 | denotes | KDEL endoplasmic reticulum protein retention receptor 2 |
T7965 | 249-270 | GO:0005783 | denotes | endoplasmic reticulum |
T7966 | 249-288 | GO:0035437 | denotes | endoplasmic reticulum protein retention |
T7967 | 301-307 | PR:000009274 | denotes | Kdelr2 |
T7968 | 326-328 | GO:0005783 | denotes | ER |
T7969 | 374-402 | PR:000004621 | denotes | Bcl2-associated athanogene 3 |
T7970 | 404-408 | PR:000004621 | denotes | Bag3 |
T7971 | 437-446 | GO:0006915 | denotes | apoptosis |
craft-ca-core-ex-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T8083 | 8-13 | SO_EXT:0000704 | denotes | genes |
T8084 | 29-40 | CHEBI:16856 | denotes | glutathione |
T8085 | 79-84 | SO_EXT:0000704 | denotes | genes |
T8086 | 90-101 | GO_EXT:positive_regulation | denotes | upregulated |
T8087 | 107-114 | CHEBI_EXT:cadmium | denotes | cadmium |
T8088 | 135-140 | SO_EXT:0000704 | denotes | genes |
T8089 | 145-156 | CHEBI_PR_EXT:thioredoxin | denotes | thioredoxin |
T8090 | 145-166 | GO_EXT:0004791 | denotes | thioredoxin reductase |
T8091 | 145-168 | PR_EXT:000016871 | denotes | thioredoxin reductase 1 |
T8092 | 170-176 | PR_EXT:000016871 | denotes | Txnrd1 |
T8093 | 190-198 | MOP:0000569 | denotes | reducing |
T8094 | 199-206 | CHEBI_GO_SO_EXT:enzyme | denotes | enzymes |
T8095 | 214-225 | CHEBI_GO_EXT:antioxidant | denotes | antioxidant |
T8096 | 218-225 | CHEBI_MOP_EXT:oxidising_agent_or_oxidation | denotes | oxidant |
T8097 | 226-237 | CHEBI_PR_EXT:thioredoxin | denotes | thioredoxin |
T8098 | 244-299 | PR_EXT:000009274 | denotes | KDEL endoplasmic reticulum protein retention receptor 2 |
T8099 | 249-270 | GO:0005783 | denotes | endoplasmic reticulum |
T8100 | 249-288 | GO:0035437 | denotes | endoplasmic reticulum protein retention |
T8101 | 271-278 | CHEBI_PR_EXT:protein | denotes | protein |
T8102 | 289-297 | GO_EXT:0004872 | denotes | receptor |
T8103 | 301-307 | PR_EXT:000009274 | denotes | Kdelr2 |
T8104 | 326-328 | GO:0005783 | denotes | ER |
T8105 | 336-344 | GO_EXT:reaction_or_response | denotes | response |
T8106 | 364-373 | GO_PATO_EXT:apoptotic_process_or_quality | denotes | apoptotic |
T8107 | 374-402 | PR_EXT:000004621 | denotes | Bcl2-associated athanogene 3 |
T8108 | 404-408 | PR_EXT:000004621 | denotes | Bag3 |
T8109 | 437-446 | GO:0006915 | denotes | apoptosis |