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PMC:1253828 / 18436-18677 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T5615 0-241 sentence denotes For 26 probe sets corresponding to 24 different characterized genes, a 2-fold or higher, reliable upregulation was detected in Mtf1Mx-cre livers (Table 1, b); 17 of these 24 genes contain MRE core consensus sequences in the upstream region.
T5616 1-4 IN denotes For
T5617 116-124 VBN denotes detected
T5618 5-7 CD denotes 26
T5619 14-18 NNS denotes sets
T5620 8-13 NN denotes probe
T5621 19-32 VBG denotes corresponding
T5622 33-35 IN denotes to
T5623 36-38 CD denotes 24
T5624 63-68 NNS denotes genes
T5625 39-48 JJ denotes different
T5626 49-62 VBN denotes characterized
T5627 68-70 , denotes ,
T5628 70-71 DT denotes a
T5629 99-111 NN denotes upregulation
T5630 72-78 JJ denotes 2-fold
T5631 79-81 CC denotes or
T5632 82-88 JJR denotes higher
T5633 88-90 , denotes ,
T5634 90-98 JJ denotes reliable
T5635 112-115 VBD denotes was
T5636 181-188 VBP denotes contain
T5637 125-127 IN denotes in
T5638 128-134 NN denotes Mtf1Mx
T5639 135-138 NN denotes cre
T5640 134-135 HYPH denotes -
T5641 139-145 NNS denotes livers
T5642 146-147 -LRB- denotes (
T5643 156-157 NN denotes b
T5644 147-152 NN denotes Table
T5645 153-154 CD denotes 1
T5646 154-156 , denotes ,
T5647 157-158 -RRB- denotes )
T5648 158-159 : denotes ;
T5649 160-162 CD denotes 17
T5650 163-165 IN denotes of
T5651 166-171 DT denotes these
T5652 175-180 NNS denotes genes
T5653 172-174 CD denotes 24
T5654 189-192 NN denotes MRE
T5655 193-197 NN denotes core
T5656 208-217 NNS denotes sequences
T5657 198-207 NN denotes consensus
T5658 218-220 IN denotes in
T5659 221-224 DT denotes the
T5660 234-240 NN denotes region
T5661 225-233 JJ denotes upstream
T5662 240-241 . denotes .
R3588 T5616 T5617 prep For,detected
R3589 T5617 T5636 ccomp detected,contain
R3590 T5618 T5619 nummod 26,sets
R3591 T5619 T5616 pobj sets,For
R3592 T5620 T5619 compound probe,sets
R3593 T5621 T5619 acl corresponding,sets
R3594 T5622 T5621 prep to,corresponding
R3595 T5623 T5624 nummod 24,genes
R3596 T5624 T5622 pobj genes,to
R3597 T5625 T5624 amod different,genes
R3598 T5626 T5624 amod characterized,genes
R3599 T5627 T5617 punct ", ",detected
R3600 T5628 T5629 det a,upregulation
R3601 T5629 T5617 nsubjpass upregulation,detected
R3602 T5630 T5629 amod 2-fold,upregulation
R3603 T5631 T5630 cc or,2-fold
R3604 T5632 T5630 conj higher,2-fold
R3605 T5633 T5629 punct ", ",upregulation
R3606 T5634 T5629 amod reliable,upregulation
R3607 T5635 T5617 auxpass was,detected
R3608 T5637 T5617 prep in,detected
R3609 T5638 T5639 compound Mtf1Mx,cre
R3610 T5639 T5641 compound cre,livers
R3611 T5640 T5639 punct -,cre
R3612 T5641 T5637 pobj livers,in
R3613 T5642 T5643 punct (,b
R3614 T5643 T5641 parataxis b,livers
R3615 T5644 T5643 nmod Table,b
R3616 T5645 T5643 nummod 1,b
R3617 T5646 T5643 punct ", ",b
R3618 T5647 T5643 punct ),b
R3619 T5648 T5636 punct ;,contain
R3620 T5649 T5636 nsubj 17,contain
R3621 T5650 T5649 prep of,17
R3622 T5651 T5652 det these,genes
R3623 T5652 T5650 pobj genes,of
R3624 T5653 T5652 nummod 24,genes
R3625 T5654 T5655 compound MRE,core
R3626 T5655 T5656 compound core,sequences
R3627 T5656 T5636 dobj sequences,contain
R3628 T5657 T5656 compound consensus,sequences
R3629 T5658 T5636 prep in,contain
R3630 T5659 T5660 det the,region
R3631 T5660 T5658 pobj region,in
R3632 T5661 T5660 amod upstream,region
R3633 T5662 T5636 punct .,contain

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T5170 63-68 SO:0000704 denotes genes
T5171 128-132 PR:000010717 denotes Mtf1
T5172 132-134 PR:000010788 denotes Mx
T5173 139-145 UBERON:0002107 denotes livers
T5174 175-180 SO:0000704 denotes genes
T5175 198-207 SO:0000993 denotes consensus

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T5266 8-13 CHEBI_SO_EXT:molecular_probe denotes probe
T5267 63-68 SO_EXT:0000704 denotes genes
T5268 99-111 GO_EXT:positive_regulation denotes upregulation
T5269 128-132 PR_EXT:000010717 denotes Mtf1
T5270 132-134 PR_EXT:000010788 denotes Mx
T5271 139-145 UBERON:0002107 denotes livers
T5272 175-180 SO_EXT:0000704 denotes genes
T5273 198-207 SO:0000993 denotes consensus
T5274 208-217 SO_EXT:biological_sequence denotes sequences
T5275 225-233 SO_EXT:sequence_upstreamness denotes upstream