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PMC:1208879 / 4895-5355 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T1497 4-11 NN denotes element
T1502 12-14 IN denotes of
T1503 15-18 DT denotes the
T1504 32-36 NN denotes gene
T1505 19-20 SYM denotes δ
T1506 21-31 NN denotes crystallin
T1507 20-21 HYPH denotes -
T1508 37-38 -LRB- denotes [
T1509 38-40 CD denotes 22
T1510 40-41 -RRB- denotes ]
T1511 41-42 : denotes ;
T1512 43-47 IN denotes with
T1513 48-52 NN denotes MDIA
T1514 52-54 , denotes ,
T1515 54-59 WDT denotes which
T1516 60-69 VBZ denotes modulates
T1517 70-74 NN denotes PAX6
T1518 75-83 NN denotes activity
T1519 84-86 IN denotes in
T1520 87-92 JJ denotes early
T1521 102-113 NN denotes development
T1522 93-101 JJ denotes neuronal
T1523 114-115 -LRB- denotes [
T1524 115-117 CD denotes 23
T1525 117-118 -RRB- denotes ]
T1526 118-120 , denotes ,
T1527 120-123 CC denotes and
T1528 124-128 IN denotes with
T1529 129-132 NN denotes MAF
T1530 133-141 NN denotes proteins
T1531 142-144 IN denotes on
T1532 145-148 DT denotes the
T1533 158-166 NN denotes promoter
T1534 149-157 NN denotes glucagon
T1535 166-168 , denotes ,
T1536 168-173 WDT denotes which
T1537 174-180 VBZ denotes causes
T1538 181-190 VBN denotes increased
T1539 191-201 NN denotes expression
T1540 202-204 IN denotes of
T1541 205-209 DT denotes this
T1542 229-233 NN denotes gene
T1543 210-220 JJ denotes pancreatic
T1544 221-228 NN denotes hormone
T1545 234-235 -LRB- denotes [
T1546 235-237 CD denotes 17
T1547 237-238 -RRB- denotes ]
T1548 238-239 . denotes .
T1549 239-347 sentence denotes Here we report the preliminary results of the first systematic screen for proteins that interact with PAX6.
T1550 240-244 RB denotes Here
T1551 248-254 VBP denotes report
T1552 245-247 PRP denotes we
T1553 255-258 DT denotes the
T1554 271-278 NNS denotes results
T1555 259-270 JJ denotes preliminary
T1556 279-281 IN denotes of
T1557 282-285 DT denotes the
T1558 303-309 NN denotes screen
T1559 286-291 JJ denotes first
T1560 292-302 JJ denotes systematic
T1561 310-313 IN denotes for
T1562 314-322 NN denotes proteins
T1563 323-327 WDT denotes that
T1564 328-336 VBP denotes interact
T1565 337-341 IN denotes with
T1566 342-346 NN denotes PAX6
T1567 346-347 . denotes .
T1569 348-350 PRP denotes We
T1570 351-355 VBD denotes used
T1571 356-364 NN denotes sequence
T1572 365-374 NN denotes alignment
T1573 375-385 NNS denotes algorithms
T1574 386-389 CC denotes and
T1575 390-399 JJ denotes secondary
T1576 400-409 NN denotes structure
T1577 410-420 NN denotes prediction
T1578 421-429 NNS denotes programs
T1579 430-432 TO denotes to
T1580 433-439 VB denotes define
T1581 440-441 DT denotes a
T1582 446-452 NN denotes domain
T1583 442-445 JJ denotes new
T1584 453-455 IN denotes of
T1585 456-458 CD denotes 32
R882 T1502 T1497 prep of,element
R883 T1503 T1504 det the,gene
R884 T1504 T1502 pobj gene,of
R885 T1505 T1506 punct δ,crystallin
R886 T1506 T1504 compound crystallin,gene
R887 T1507 T1506 punct -,crystallin
R888 T1508 T1509 punct [,22
R890 T1510 T1509 punct ],22
R893 T1513 T1512 pobj MDIA,with
R894 T1514 T1513 punct ", ",MDIA
R895 T1515 T1516 dep which,modulates
R896 T1516 T1513 relcl modulates,MDIA
R897 T1517 T1518 compound PAX6,activity
R898 T1518 T1516 dobj activity,modulates
R899 T1519 T1516 prep in,modulates
R900 T1520 T1521 amod early,development
R901 T1521 T1519 pobj development,in
R902 T1522 T1521 amod neuronal,development
R903 T1523 T1524 punct [,23
R904 T1524 T1513 parataxis 23,MDIA
R905 T1525 T1524 punct ],23
R906 T1526 T1512 punct ", ",with
R907 T1527 T1512 cc and,with
R908 T1528 T1512 conj with,with
R909 T1529 T1530 compound MAF,proteins
R910 T1530 T1528 pobj proteins,with
R911 T1531 T1530 prep on,proteins
R912 T1532 T1533 det the,promoter
R914 T1533 T1531 pobj promoter,on
R915 T1534 T1533 compound glucagon,promoter
R918 T1535 T1533 punct ", ",promoter
R922 T1536 T1537 dep which,causes
R925 T1537 T1533 relcl causes,promoter
R932 T1538 T1539 amod increased,expression
R935 T1539 T1537 dobj expression,causes
R938 T1540 T1539 prep of,expression
R941 T1541 T1542 det this,gene
R944 T1542 T1540 pobj gene,of
R948 T1543 T1542 amod pancreatic,gene
R951 T1544 T1542 compound hormone,gene
R952 T1545 T1546 punct [,17
R955 T1546 T1528 parataxis 17,with
R957 T1547 T1546 punct ],17
R962 T1550 T1551 advmod Here,report
R963 T1552 T1551 nsubj we,report
R964 T1553 T1554 det the,results
R965 T1554 T1551 dobj results,report
R966 T1555 T1554 amod preliminary,results
R967 T1556 T1554 prep of,results
R968 T1557 T1558 det the,screen
R969 T1558 T1556 pobj screen,of
R970 T1559 T1558 amod first,screen
R971 T1560 T1558 amod systematic,screen
R972 T1561 T1558 prep for,screen
R973 T1562 T1561 pobj proteins,for
R974 T1563 T1564 dep that,interact
R975 T1564 T1562 relcl interact,proteins
R976 T1565 T1564 prep with,interact
R977 T1566 T1565 pobj PAX6,with
R978 T1567 T1551 punct .,report
R979 T1569 T1570 nsubj We,used
R980 T1571 T1572 compound sequence,alignment
R981 T1572 T1573 compound alignment,algorithms
R982 T1573 T1570 dobj algorithms,used
R983 T1574 T1573 cc and,algorithms
R984 T1575 T1576 amod secondary,structure
R985 T1576 T1577 compound structure,prediction
R986 T1577 T1578 compound prediction,programs
R987 T1578 T1573 conj programs,algorithms
R988 T1579 T1580 aux to,define
R989 T1580 T1570 advcl define,used
R990 T1581 T1582 det a,domain
R991 T1582 T1580 dobj domain,define
R992 T1583 T1582 amod new,domain
R993 T1584 T1582 prep of,domain

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T801 32-36 SO_EXT:0000704 denotes gene
T802 60-69 GO:0065007 denotes modulates
T803 70-74 PR_EXT:000012318 denotes PAX6
T804 93-101 CL:0000540 denotes neuronal
T805 93-113 GO_EXT:neuron_development_or_generation denotes neuronal development
T806 133-141 CHEBI_PR_EXT:protein denotes proteins
T807 149-157 CHEBI_PR_EXT:glucagon denotes glucagon
T808 158-166 SO_EXT:0000167 denotes promoter
T809 191-204 _FRAGMENT denotes expression of
T810 229-233 GO:0010467 denotes gene
T811 210-220 UBERON:0001264 denotes pancreatic
T812 221-228 CHEBI_GO_EXT:hormone denotes hormone
T813 229-233 SO_EXT:0000704 denotes gene
T814 314-322 CHEBI_PR_EXT:protein denotes proteins
T815 342-346 PR_EXT:000012318 denotes PAX6
T816 356-364 SO_EXT:biological_sequence denotes sequence
T817 446-452 SO_EXT:0000417 denotes domain
R256 T810 T809 _lexicallyChainedTo gene,expression of

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T647 32-36 SO:0000704 denotes gene
T648 60-69 GO:0065007 denotes modulates
T649 70-74 PR:000012318 denotes PAX6
T650 93-101 CL:0000540 denotes neuronal
T651 158-166 SO:0000167 denotes promoter
T652 191-204 _FRAGMENT denotes expression of
T653 229-233 GO:0010467 denotes gene
T654 210-220 UBERON:0001264 denotes pancreatic
T655 229-233 SO:0000704 denotes gene
T656 342-346 PR:000012318 denotes PAX6
T657 446-452 SO:0000417 denotes domain
R253 T653 T652 _lexicallyChainedTo gene,expression of