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PMC:1208879 / 28592-29121 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T7663 528-529 . denotes .
T7662 527-528 -RRB- denotes ]
T7661 525-527 CD denotes 24
T7660 524-525 -LRB- denotes [
T7659 512-516 NN denotes cDNA
T7658 517-523 NN denotes insert
T7657 508-511 DT denotes the
T7656 499-507 VB denotes identify
T7655 496-498 TO denotes to
T7654 481-485 VBD denotes were
T7653 486-495 VBN denotes performed
T7652 472-480 NNS denotes searches
T7651 466-471 NNP denotes BLAST
T7650 465-529 sentence denotes BLAST searches were performed to identify the cDNA insert [24].
T7649 464-465 . denotes .
T7648 455-464 VBN denotes sequenced
T7647 443-447 NN denotes cDNA
T7646 448-454 NN denotes insert
T7645 439-442 DT denotes the
T7644 435-438 CC denotes and
T7643 419-420 HYPH denotes /
T7642 415-419 NN denotes URA3
T7641 414-415 HYPH denotes /
T7640 420-424 NN denotes LacZ
T7639 410-414 NN denotes HIS3
T7638 425-434 NNS denotes positives
T7637 406-409 DT denotes all
T7636 401-405 IN denotes from
T7635 388-391 VBD denotes was
T7634 392-400 VBN denotes isolated
T7633 375-379 NN denotes prey
T7632 369-374 NN denotes pPC86
T7631 380-387 NN denotes plasmid
T7630 365-368 DT denotes The
T7629 364-465 sentence denotes The pPC86 prey plasmid was isolated from all HIS3/URA3/LacZ positives and the cDNA insert sequenced.
T7628 363-364 . denotes .
T7627 352-353 CD denotes 3
T7626 354-363 NNS denotes reporters
T7625 348-351 DT denotes all
T7624 344-347 IN denotes for
T7623 331-335 RB denotes then
T7622 326-330 VBD denotes were
T7621 336-343 VBN denotes assayed
T7620 316-325 NNS denotes positives
T7619 311-315 NN denotes HIS3
T7618 310-364 sentence denotes HIS3 positives were then assayed for all 3 reporters.
T7617 309-310 . denotes .
T7616 299-309 NN denotes activation
T7615 294-298 NN denotes HIS3
T7614 290-293 IN denotes for
T7613 284-289 VB denotes check
T7612 281-283 TO denotes to
T7611 271-280 NN denotes histidine
T7610 263-270 VBG denotes lacking
T7609 256-262 NN denotes medium
T7608 253-255 IN denotes on
T7607 241-245 VBD denotes were
T7606 239-240 -RRB- denotes )
T7605 234-235 SYM denotes ×
T7604 232-233 CD denotes 5
T7603 236-239 CD denotes 107
T7602 231-232 -LRB- denotes (
T7601 246-252 VBN denotes plated
T7600 217-230 NNS denotes Transformants
T7599 216-310 sentence denotes Transformants (5 × 107) were plated on medium lacking histidine to check for HIS3 activation.
T7598 215-216 . denotes .
T7597 208-215 NN denotes PAX6PST
T7596 201-207 NN denotes pDBLeu
T7595 198-200 CC denotes or
T7594 190-197 NN denotes PAX6CTP
T7593 183-189 NN denotes pDBLeu
T7592 170-174 NN denotes bait
T7591 175-182 NN denotes plasmid
T7590 166-169 DT denotes the
T7589 162-165 CC denotes and
T7588 149-153 NN denotes cDNA
T7587 154-161 NN denotes library
T7586 145-148 DT denotes the
T7585 140-144 IN denotes with
T7584 120-124 VBD denotes were
T7583 108-113 NN denotes yeast
T7582 101-107 NN denotes MaV203
T7581 114-119 NNS denotes cells
T7580 91-100 JJ denotes competent
T7579 80-90 RB denotes chemically
T7578 78-80 , denotes ,
T7577 125-139 VBN denotes co-transformed
T7576 71-78 RB denotes Briefly
T7575 70-216 sentence denotes Briefly, chemically competent MaV203 yeast cells were co-transformed with the cDNA library and the bait plasmid pDBLeu PAX6CTP or pDBLeu PAX6PST.
T7574 69-70 . denotes .
T7573 57-59 POS denotes 's
T7572 60-69 NNS denotes protocols
T7571 49-57 NN denotes supplier
T7570 45-48 DT denotes the
T7569 42-44 IN denotes to
T7568 32-41 VBG denotes according
T7567 28-31 RP denotes out
T7566 15-19 VBD denotes were
T7565 20-27 VBN denotes carried
T7564 4-14 NNS denotes procedures
T7563 0-3 DT denotes All
R4792 T7563 T7564 det All,procedures
R4793 T7564 T7565 nsubjpass procedures,carried
R4794 T7566 T7565 auxpass were,carried
R4795 T7567 T7565 prt out,carried
R4796 T7568 T7565 prep according,carried
R4797 T7569 T7568 prep to,according
R4798 T7570 T7571 det the,supplier
R4799 T7571 T7572 poss supplier,protocols
R4800 T7572 T7569 pobj protocols,to
R4801 T7573 T7571 case 's,supplier
R4802 T7574 T7565 punct .,carried
R4803 T7576 T7577 advmod Briefly,co-transformed
R4804 T7578 T7577 punct ", ",co-transformed
R4805 T7579 T7580 advmod chemically,competent
R4806 T7580 T7581 amod competent,cells
R4807 T7581 T7577 nsubjpass cells,co-transformed
R4808 T7582 T7581 compound MaV203,cells
R4809 T7583 T7581 compound yeast,cells
R4810 T7584 T7577 auxpass were,co-transformed
R4811 T7585 T7577 prep with,co-transformed
R4812 T7586 T7587 det the,library
R4813 T7587 T7585 pobj library,with
R4814 T7588 T7587 compound cDNA,library
R4815 T7589 T7587 cc and,library
R4816 T7590 T7591 det the,plasmid
R4817 T7591 T7587 conj plasmid,library
R4818 T7592 T7591 compound bait,plasmid
R4819 T7593 T7594 compound pDBLeu,PAX6CTP
R4820 T7594 T7591 appos PAX6CTP,plasmid
R4821 T7595 T7594 cc or,PAX6CTP
R4822 T7596 T7597 compound pDBLeu,PAX6PST
R4823 T7597 T7594 conj PAX6PST,PAX6CTP
R4824 T7598 T7577 punct .,co-transformed
R4825 T7600 T7601 nsubjpass Transformants,plated
R4826 T7602 T7603 punct (,107
R4827 T7603 T7600 parataxis 107,Transformants
R4828 T7604 T7603 nummod 5,107
R4829 T7605 T7603 punct ×,107
R4830 T7606 T7603 punct ),107
R4831 T7607 T7601 auxpass were,plated
R4832 T7608 T7601 prep on,plated
R4833 T7609 T7608 pobj medium,on
R4834 T7610 T7609 acl lacking,medium
R4835 T7611 T7610 dobj histidine,lacking
R4836 T7612 T7613 aux to,check
R4837 T7613 T7601 advcl check,plated
R4838 T7614 T7613 prep for,check
R4839 T7615 T7616 compound HIS3,activation
R4840 T7616 T7614 pobj activation,for
R4841 T7617 T7601 punct .,plated
R4842 T7619 T7620 compound HIS3,positives
R4843 T7620 T7621 nsubjpass positives,assayed
R4844 T7622 T7621 auxpass were,assayed
R4845 T7623 T7621 advmod then,assayed
R4846 T7624 T7621 prep for,assayed
R4847 T7625 T7626 det all,reporters
R4848 T7626 T7624 pobj reporters,for
R4849 T7627 T7626 nummod 3,reporters
R4850 T7628 T7621 punct .,assayed
R4851 T7630 T7631 det The,plasmid
R4852 T7631 T7634 nsubjpass plasmid,isolated
R4853 T7632 T7631 compound pPC86,plasmid
R4854 T7633 T7631 compound prey,plasmid
R4855 T7635 T7634 auxpass was,isolated
R4856 T7636 T7634 prep from,isolated
R4857 T7637 T7638 det all,positives
R4858 T7638 T7636 pobj positives,from
R4859 T7639 T7640 compound HIS3,LacZ
R4860 T7640 T7638 compound LacZ,positives
R4861 T7641 T7640 punct /,LacZ
R4862 T7642 T7640 compound URA3,LacZ
R4863 T7643 T7640 punct /,LacZ
R4864 T7644 T7634 cc and,isolated
R4865 T7645 T7646 det the,insert
R4866 T7646 T7648 nsubj insert,sequenced
R4867 T7647 T7646 compound cDNA,insert
R4868 T7648 T7634 conj sequenced,isolated
R4869 T7649 T7648 punct .,sequenced
R4870 T7651 T7652 compound BLAST,searches
R4871 T7652 T7653 nsubjpass searches,performed
R4872 T7654 T7653 auxpass were,performed
R4873 T7655 T7656 aux to,identify
R4874 T7656 T7653 advcl identify,performed
R4875 T7657 T7658 det the,insert
R4876 T7658 T7656 dobj insert,identify
R4877 T7659 T7658 compound cDNA,insert
R4878 T7660 T7661 punct [,24
R4879 T7661 T7653 parataxis 24,performed
R4880 T7662 T7661 punct ],24
R4881 T7663 T7653 punct .,performed

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T7367 517-523 SO_EXT:0000667 denotes insert
T7366 512-516 SO_EXT:cDNA denotes cDNA
T7365 448-454 SO_EXT:0000667 denotes insert
T7364 443-447 SO_EXT:cDNA denotes cDNA
T7363 420-424 PR_EXT:000033987 denotes LacZ
T7362 415-419 PR_EXT:P03962 denotes URA3
T7361 410-414 PR_EXT:P06633 denotes HIS3
T7360 380-387 SO_EXT:0000155 denotes plasmid
T7359 311-315 PR_EXT:P06633 denotes HIS3
T7358 294-298 PR_EXT:P06633 denotes HIS3
T7357 271-280 CHEBI_SO_EXT:histidine denotes histidine
T7356 217-230 GO_EXT:transfectant_or_tranformant denotes Transformants
T7355 175-182 SO_EXT:0000155 denotes plasmid
T7354 149-153 SO_EXT:cDNA denotes cDNA
T7353 128-139 GO:0009294 denotes transformed
T7352 114-119 CL_GO_EXT:cell denotes cells
T7351 108-113 NCBITaxon_EXT:yeast denotes yeast
T7350 80-90 CHEBI_EXT:chemical_substance_or_polyatomic_entity denotes chemically

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T7309 517-523 SO:0000667 denotes insert
T7308 448-454 SO:0000667 denotes insert
T7307 420-424 PR:000033987 denotes LacZ
T7306 415-419 PR:P03962 denotes URA3
T7305 410-414 PR:P06633 denotes HIS3
T7304 380-387 SO:0000155 denotes plasmid
T7303 311-315 PR:P06633 denotes HIS3
T7302 294-298 PR:P06633 denotes HIS3
T7301 175-182 SO:0000155 denotes plasmid
T7300 128-139 GO:0009294 denotes transformed