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PMC:1208879 / 24838-25286 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T6577 447-448 . denotes .
T6576 426-427 SYM denotes -
T6575 427-434 NN denotes protein
T6574 419-426 NN denotes protein
T6573 435-447 NNS denotes interactions
T6572 410-418 VBN denotes impaired
T6571 407-409 IN denotes by
T6570 394-396 VB denotes be
T6569 390-393 MD denotes may
T6568 380-389 NNS denotes mutations
T6567 375-379 NN denotes PAX6
T6566 370-374 IN denotes with
T6565 361-369 NNS denotes patients
T6564 358-360 IN denotes in
T6563 341-347 JJ denotes neural
T6562 348-357 NNS denotes anomalies
T6561 337-340 DT denotes the
T6560 334-336 IN denotes of
T6559 329-333 DT denotes some
T6558 397-406 VBN denotes explained
T6557 324-328 IN denotes that
T6556 311-315 RB denotes also
T6555 316-323 VBP denotes propose
T6554 308-310 PRP denotes We
T6553 307-448 sentence denotes We also propose that some of the neural anomalies in patients with PAX6 mutations may be explained by impaired protein-protein interactions.
T6552 306-307 . denotes .
T6551 299-306 NNS denotes neurons
T6550 296-298 IN denotes in
T6549 285-295 NN denotes expression
T6548 280-284 NN denotes gene
T6547 277-279 IN denotes in
T6546 269-276 NNS denotes changes
T6545 259-268 VBN denotes regulated
T6544 256-258 IN denotes to
T6543 245-250 MD denotes could
T6542 234-244 NN denotes signalling
T6541 225-233 JJ denotes synaptic
T6540 219-224 WDT denotes which
T6539 251-255 VB denotes lead
T6538 216-218 IN denotes by
T6537 206-215 NN denotes mechanism
T6536 204-205 DT denotes a
T6535 195-200 NN denotes DNCL1
T6534 191-194 CC denotes and
T6533 184-190 NN denotes HOMER3
T6532 179-183 IN denotes with
T6531 174-178 NN denotes PAX6
T6530 171-173 IN denotes of
T6529 159-170 NN denotes interaction
T6528 155-158 DT denotes the
T6527 201-203 VBZ denotes is
T6526 150-154 IN denotes that
T6525 142-149 VBP denotes suggest
T6524 139-141 PRP denotes We
T6523 138-307 sentence denotes We suggest that the interaction of PAX6 with HOMER3 and DNCL1 is a mechanism by which synaptic signalling could lead to regulated changes in gene expression in neurons.
T6522 137-138 . denotes .
T6521 131-137 NN denotes TRIM11
T6520 127-130 CC denotes and
T6519 121-126 NN denotes DNCL1
T6518 119-121 , denotes ,
T6517 113-119 NN denotes HOMER3
T6516 108-112 IN denotes with
T6515 93-97 NN denotes PAX6
T6514 67-82 JJ denotes transcriptional
T6513 48-66 JJ denotes neurodevelopmental
T6512 83-92 NN denotes regulator
T6511 44-47 DT denotes the
T6510 98-107 VBZ denotes interacts
T6509 39-43 IN denotes that
T6508 30-38 NN denotes evidence
T6507 18-29 JJ denotes preliminary
T6506 3-7 VBP denotes have
T6505 8-17 VBN denotes presented
T6504 0-2 PRP denotes We
R4068 T6504 T6505 nsubj We,presented
R4069 T6506 T6505 aux have,presented
R4070 T6507 T6508 amod preliminary,evidence
R4071 T6508 T6505 dobj evidence,presented
R4072 T6509 T6510 mark that,interacts
R4073 T6510 T6508 acl interacts,evidence
R4074 T6511 T6512 det the,regulator
R4075 T6512 T6510 nsubj regulator,interacts
R4076 T6513 T6512 amod neurodevelopmental,regulator
R4077 T6514 T6512 amod transcriptional,regulator
R4078 T6515 T6512 appos PAX6,regulator
R4079 T6516 T6510 prep with,interacts
R4080 T6517 T6516 pobj HOMER3,with
R4081 T6518 T6517 punct ", ",HOMER3
R4082 T6519 T6517 conj DNCL1,HOMER3
R4083 T6520 T6519 cc and,DNCL1
R4084 T6521 T6519 conj TRIM11,DNCL1
R4085 T6522 T6505 punct .,presented
R4086 T6524 T6525 nsubj We,suggest
R4087 T6526 T6527 mark that,is
R4088 T6527 T6525 ccomp is,suggest
R4089 T6528 T6529 det the,interaction
R4090 T6529 T6527 nsubj interaction,is
R4091 T6530 T6529 prep of,interaction
R4092 T6531 T6530 pobj PAX6,of
R4093 T6532 T6529 prep with,interaction
R4094 T6533 T6532 pobj HOMER3,with
R4095 T6534 T6533 cc and,HOMER3
R4096 T6535 T6533 conj DNCL1,HOMER3
R4097 T6536 T6537 det a,mechanism
R4098 T6537 T6527 attr mechanism,is
R4099 T6538 T6539 prep by,lead
R4100 T6539 T6537 relcl lead,mechanism
R4101 T6540 T6538 pobj which,by
R4102 T6541 T6542 amod synaptic,signalling
R4103 T6542 T6539 nsubj signalling,lead
R4104 T6543 T6539 aux could,lead
R4105 T6544 T6539 prep to,lead
R4106 T6545 T6546 amod regulated,changes
R4107 T6546 T6544 pobj changes,to
R4108 T6547 T6546 prep in,changes
R4109 T6548 T6549 compound gene,expression
R4110 T6549 T6547 pobj expression,in
R4111 T6550 T6539 prep in,lead
R4112 T6551 T6550 pobj neurons,in
R4113 T6552 T6525 punct .,suggest
R4114 T6554 T6555 nsubj We,propose
R4115 T6556 T6555 advmod also,propose
R4116 T6557 T6558 mark that,explained
R4117 T6558 T6555 ccomp explained,propose
R4118 T6559 T6558 nsubjpass some,explained
R4119 T6560 T6559 prep of,some
R4120 T6561 T6562 det the,anomalies
R4121 T6562 T6560 pobj anomalies,of
R4122 T6563 T6562 amod neural,anomalies
R4123 T6564 T6562 prep in,anomalies
R4124 T6565 T6564 pobj patients,in
R4125 T6566 T6565 prep with,patients
R4126 T6567 T6568 compound PAX6,mutations
R4127 T6568 T6566 pobj mutations,with
R4128 T6569 T6558 aux may,explained
R4129 T6570 T6558 auxpass be,explained
R4130 T6571 T6558 agent by,explained
R4131 T6572 T6573 amod impaired,interactions
R4132 T6573 T6571 pobj interactions,by
R4133 T6574 T6575 nmod protein,protein
R4134 T6575 T6573 compound protein,interactions
R4135 T6576 T6575 punct -,protein
R4136 T6577 T6555 punct .,propose

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T6503 427-434 CHEBI_PR_EXT:protein denotes protein
T6502 419-426 CHEBI_PR_EXT:protein denotes protein
T6501 380-389 SO_EXT:sequence_alteration_entity_or_process denotes mutations
T6500 375-379 PR_EXT:000012318 denotes PAX6
T6499 341-347 UBERON_EXT:neural_tissue_or_nerve_or_nervous_system denotes neural
T6498 299-306 CL:0000540 denotes neurons
T6497 280-295 GO:0010467 denotes gene expression
T6496 280-284 SO_EXT:0000704 denotes gene
T6495 259-268 GO:0065007 denotes regulated
T6494 225-244 GO:0099536 denotes synaptic signalling
T6493 225-233 GO:0045202 denotes synaptic
T6492 195-200 PR_EXT:000002325 denotes DNCL1
T6491 184-190 PR_EXT:000008680 denotes HOMER3
T6490 174-178 PR_EXT:000012318 denotes PAX6
T6489 131-137 PR_EXT:000016642 denotes TRIM11
T6488 121-126 PR_EXT:000002325 denotes DNCL1
T6487 113-119 PR_EXT:000008680 denotes HOMER3
T6486 93-97 PR_EXT:000012318 denotes PAX6
T6485 83-92 GO_EXT:regulator denotes regulator
T6484 67-82 GO_EXT:transcription denotes transcriptional
T6483 48-66 GO:0007399 denotes neurodevelopmental

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T6473 174-178 PR:000012318 denotes PAX6
T6472 131-137 PR:000016642 denotes TRIM11
T6471 121-126 PR:000002325 denotes DNCL1
T6470 113-119 PR:000008680 denotes HOMER3
T6469 93-97 PR:000012318 denotes PAX6
T6482 375-379 PR:000012318 denotes PAX6
T6481 299-306 CL:0000540 denotes neurons
T6480 280-295 GO:0010467 denotes gene expression
T6479 280-284 SO:0000704 denotes gene
T6478 259-268 GO:0065007 denotes regulated
T6477 225-244 GO:0099536 denotes synaptic signalling
T6476 225-233 GO:0045202 denotes synaptic
T6475 195-200 PR:000002325 denotes DNCL1
T6474 184-190 PR:000008680 denotes HOMER3
T6468 48-66 GO:0007399 denotes neurodevelopmental