PMC:1208879 / 18413-18738
Annnotations
craft-sa-dev
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T5280 | 324-325 | . | denotes | . |
| T5279 | 307-308 | HYPH | denotes | - |
| T5278 | 308-316 | JJ | denotes | terminal |
| T5277 | 306-307 | NN | denotes | C |
| T5276 | 317-324 | NN | denotes | peptide |
| T5275 | 302-305 | DT | denotes | the |
| T5274 | 294-301 | VBG | denotes | lacking |
| T5273 | 277-283 | NN | denotes | domain |
| T5272 | 273-276 | NN | denotes | PST |
| T5271 | 284-293 | NN | denotes | construct |
| T5270 | 271-272 | DT | denotes | a |
| T5269 | 266-270 | IN | denotes | with |
| T5268 | 253-256 | RB | denotes | not |
| T5267 | 249-252 | VBD | denotes | did |
| T5266 | 243-248 | NN | denotes | DNCL1 |
| T5265 | 239-242 | CC | denotes | and |
| T5264 | 232-238 | NN | denotes | HOMER3 |
| T5263 | 257-265 | VB | denotes | interact |
| T5262 | 224-231 | IN | denotes | because |
| T5261 | 205-206 | HYPH | denotes | / |
| T5260 | 206-211 | NN | denotes | DNCL1 |
| T5259 | 201-205 | NN | denotes | PAX6 |
| T5258 | 198-200 | CC | denotes | or |
| T5257 | 212-223 | NN | denotes | interaction |
| T5256 | 190-191 | HYPH | denotes | / |
| T5255 | 191-197 | NN | denotes | HOMER3 |
| T5254 | 186-190 | NN | denotes | PAX6 |
| T5253 | 182-185 | IN | denotes | for |
| T5252 | 172-181 | JJ | denotes | important |
| T5251 | 150-151 | HYPH | denotes | - |
| T5250 | 151-159 | JJ | denotes | terminal |
| T5249 | 149-150 | NN | denotes | C |
| T5248 | 160-167 | NN | denotes | peptide |
| T5247 | 145-148 | DT | denotes | the |
| T5246 | 168-171 | VBD | denotes | was |
| T5245 | 140-144 | IN | denotes | that |
| T5244 | 133-139 | VBD | denotes | showed |
| T5243 | 130-132 | PRP | denotes | we |
| T5242 | 126-129 | CC | denotes | but |
| T5241 | 124-126 | , | denotes | , |
| T5240 | 119-124 | NNS | denotes | tests |
| T5239 | 110-118 | JJ | denotes | pairwise |
| T5238 | 107-109 | IN | denotes | in |
| T5237 | 89-96 | NN | denotes | peptide |
| T5236 | 79-80 | HYPH | denotes | - |
| T5235 | 80-88 | JJ | denotes | terminal |
| T5234 | 78-79 | NN | denotes | C |
| T5233 | 97-106 | NN | denotes | construct |
| T5232 | 74-77 | DT | denotes | the |
| T5231 | 69-73 | IN | denotes | with |
| T5230 | 63-68 | NN | denotes | DNCL1 |
| T5229 | 60-62 | CC | denotes | or |
| T5228 | 53-59 | NN | denotes | HOMER3 |
| T5227 | 45-52 | IN | denotes | between |
| T5226 | 33-44 | NN | denotes | interaction |
| T5225 | 29-32 | DT | denotes | the |
| T5224 | 21-28 | VB | denotes | confirm |
| T5223 | 18-20 | TO | denotes | to |
| T5222 | 13-17 | JJ | denotes | able |
| T5221 | 9-12 | RB | denotes | not |
| T5220 | 4-8 | VBD | denotes | were |
| T5219 | 1-3 | PRP | denotes | We |
| T5218 | 0-325 | sentence | denotes | We were not able to confirm the interaction between HOMER3 or DNCL1 with the C-terminal peptide construct in pairwise tests, but we showed that the C-terminal peptide was important for PAX6/HOMER3 or PAX6/DNCL1 interaction because HOMER3 and DNCL1 did not interact with a PST domain construct lacking the C-terminal peptide. |
| R2911 | T5219 | T5220 | nsubj | We,were |
| R2912 | T5221 | T5220 | neg | not,were |
| R2913 | T5222 | T5220 | acomp | able,were |
| R2914 | T5223 | T5224 | aux | to,confirm |
| R2915 | T5224 | T5222 | xcomp | confirm,able |
| R2916 | T5225 | T5226 | det | the,interaction |
| R2917 | T5226 | T5224 | dobj | interaction,confirm |
| R2918 | T5227 | T5226 | prep | between,interaction |
| R2919 | T5228 | T5227 | pobj | HOMER3,between |
| R2920 | T5229 | T5228 | cc | or,HOMER3 |
| R2921 | T5230 | T5228 | conj | DNCL1,HOMER3 |
| R2922 | T5231 | T5224 | prep | with,confirm |
| R2923 | T5232 | T5233 | det | the,construct |
| R2924 | T5233 | T5231 | pobj | construct,with |
| R2925 | T5234 | T5235 | npadvmod | C,terminal |
| R2926 | T5235 | T5233 | amod | terminal,construct |
| R2927 | T5236 | T5235 | punct | -,terminal |
| R2928 | T5237 | T5233 | compound | peptide,construct |
| R2929 | T5238 | T5224 | prep | in,confirm |
| R2930 | T5239 | T5240 | amod | pairwise,tests |
| R2931 | T5240 | T5238 | pobj | tests,in |
| R2932 | T5241 | T5220 | punct | ", ",were |
| R2933 | T5242 | T5220 | cc | but,were |
| R2934 | T5243 | T5244 | nsubj | we,showed |
| R2935 | T5244 | T5220 | conj | showed,were |
| R2936 | T5245 | T5246 | mark | that,was |
| R2937 | T5246 | T5244 | ccomp | was,showed |
| R2938 | T5247 | T5248 | det | the,peptide |
| R2939 | T5248 | T5246 | nsubj | peptide,was |
| R2940 | T5249 | T5250 | npadvmod | C,terminal |
| R2941 | T5250 | T5248 | amod | terminal,peptide |
| R2942 | T5251 | T5250 | punct | -,terminal |
| R2943 | T5252 | T5246 | acomp | important,was |
| R2944 | T5253 | T5252 | prep | for,important |
| R2945 | T5254 | T5255 | nmod | PAX6,HOMER3 |
| R2946 | T5255 | T5257 | nmod | HOMER3,interaction |
| R2947 | T5256 | T5255 | punct | /,HOMER3 |
| R2948 | T5257 | T5253 | pobj | interaction,for |
| R2949 | T5258 | T5255 | cc | or,HOMER3 |
| R2950 | T5259 | T5260 | compound | PAX6,DNCL1 |
| R2951 | T5260 | T5255 | conj | DNCL1,HOMER3 |
| R2952 | T5261 | T5260 | punct | /,DNCL1 |
| R2953 | T5262 | T5263 | mark | because,interact |
| R2954 | T5263 | T5246 | advcl | interact,was |
| R2955 | T5264 | T5263 | nsubj | HOMER3,interact |
| R2956 | T5265 | T5264 | cc | and,HOMER3 |
| R2957 | T5266 | T5264 | conj | DNCL1,HOMER3 |
| R2958 | T5267 | T5263 | aux | did,interact |
| R2959 | T5268 | T5263 | neg | not,interact |
| R2960 | T5269 | T5263 | prep | with,interact |
| R2961 | T5270 | T5271 | det | a,construct |
| R2962 | T5271 | T5269 | pobj | construct,with |
| R2963 | T5272 | T5271 | compound | PST,construct |
| R2964 | T5273 | T5271 | compound | domain,construct |
| R2965 | T5274 | T5271 | acl | lacking,construct |
| R2966 | T5275 | T5276 | det | the,peptide |
| R2967 | T5276 | T5274 | dobj | peptide,lacking |
| R2968 | T5277 | T5278 | npadvmod | C,terminal |
| R2969 | T5278 | T5276 | amod | terminal,peptide |
| R2970 | T5279 | T5278 | punct | -,terminal |
| R2971 | T5280 | T5244 | punct | .,showed |
craft-ca-core-ex-dev
Below, discontinuous spans are shown in the bag model. You can change it to the chain model.
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4811 | 317-324 | CHEBI_SO_EXT:peptide_or_peptide_region | denotes | peptide |
| T4810 | 306-316 | CHEBI_SO_EXT:C_terminus_or_C_terminal_region | denotes | C-terminal |
| T4809 | 284-293 | SO_EXT:engineered_biological_sequence | denotes | construct |
| T4808 | 277-283 | SO_EXT:0000417 | denotes | domain |
| T4807 | 243-248 | PR_EXT:000002325 | denotes | DNCL1 |
| T4806 | 232-238 | PR_EXT:000008680 | denotes | HOMER3 |
| T4805 | 206-211 | PR_EXT:000002325 | denotes | DNCL1 |
| T4804 | 201-205 | PR_EXT:000012318 | denotes | PAX6 |
| T4803 | 191-197 | PR_EXT:000008680 | denotes | HOMER3 |
| T4802 | 186-190 | PR_EXT:000012318 | denotes | PAX6 |
| T4801 | 160-167 | CHEBI_SO_EXT:peptide_or_peptide_region | denotes | peptide |
| T4800 | 149-159 | CHEBI_SO_EXT:C_terminus_or_C_terminal_region | denotes | C-terminal |
| T4799 | 97-106 | SO_EXT:engineered_biological_sequence | denotes | construct |
| T4798 | 89-96 | CHEBI_SO_EXT:peptide_or_peptide_region | denotes | peptide |
| T4797 | 78-88 | CHEBI_SO_EXT:C_terminus_or_C_terminal_region | denotes | C-terminal |
| T4796 | 63-68 | PR_EXT:000002325 | denotes | DNCL1 |
| T4795 | 53-59 | PR_EXT:000008680 | denotes | HOMER3 |
craft-ca-core-dev
Below, discontinuous spans are shown in the bag model. You can change it to the chain model.
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4593 | 277-283 | SO:0000417 | denotes | domain |
| T4592 | 243-248 | PR:000002325 | denotes | DNCL1 |
| T4591 | 232-238 | PR:000008680 | denotes | HOMER3 |
| T4590 | 206-211 | PR:000002325 | denotes | DNCL1 |
| T4589 | 201-205 | PR:000012318 | denotes | PAX6 |
| T4588 | 191-197 | PR:000008680 | denotes | HOMER3 |
| T4587 | 186-190 | PR:000012318 | denotes | PAX6 |
| T4586 | 63-68 | PR:000002325 | denotes | DNCL1 |
| T4585 | 53-59 | PR:000008680 | denotes | HOMER3 |