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PMC:1208879 / 15699-16343 JSONTXT

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Id Subject Object Predicate Lexical cue
T4056 643-644 . denotes .
T4055 642-643 -RRB- denotes ]
T4054 640-642 CD denotes 13
T4053 639-640 -LRB- denotes [
T4052 623-629 NN denotes corpus
T4051 630-638 NN denotes callosum
T4050 619-622 DT denotes the
T4049 616-618 IN denotes in
T4048 607-615 NNS denotes deficits
T4047 600-606 NN denotes matter
T4046 594-599 JJ denotes white
T4045 590-593 CC denotes and
T4044 588-590 , denotes ,
T4043 578-588 NN denotes cerebellum
T4042 574-577 CC denotes and
T4041 569-573 NN denotes lobe
T4040 560-568 JJ denotes temporal
T4039 558-560 , denotes ,
T4038 546-553 JJ denotes frontal
T4037 554-558 NN denotes lobe
T4036 542-545 DT denotes the
T4035 539-541 IN denotes in
T4034 525-538 NNS denotes abnormalities
T4033 518-524 NN denotes matter
T4032 513-517 JJ denotes grey
T4031 504-512 VBD denotes revealed
T4030 495-503 NN denotes analysis
T4029 491-494 NN denotes MRI
T4028 490-644 sentence denotes MRI analysis revealed grey matter abnormalities in the frontal lobe, temporal lobe and cerebellum, and white matter deficits in the corpus callosum [13].
T4027 489-490 . denotes .
T4026 488-489 -RRB- denotes ]
T4025 486-488 CD denotes 28
T4024 485-486 -LRB- denotes [
T4023 467-473 JJ denotes verbal
T4022 474-484 NN denotes inhibition
T4021 462-466 JJ denotes poor
T4020 458-461 CC denotes and
T4019 441-447 JJ denotes social
T4018 448-457 NN denotes cognition
T4017 432-440 VBN denotes impaired
T4016 422-431 VBG denotes including
T4015 398-414 JJ denotes neurobehavioural
T4014 415-421 NNS denotes traits
T4013 390-397 JJ denotes unusual
T4012 376-382 NN denotes family
T4011 371-375 DT denotes this
T4010 368-370 IN denotes in
T4009 383-389 VBD denotes showed
T4008 356-367 NNS denotes individuals
T4007 347-355 VBN denotes Affected
T4006 346-490 sentence denotes Affected individuals in this family showed unusual neurobehavioural traits including impaired social cognition and poor verbal inhibition [28].
T4005 345-346 . denotes .
T4004 335-336 HYPH denotes -
T4003 325-330 NN denotes amino
T4002 331-335 NN denotes acid
T4001 321-324 CD denotes 103
T4000 336-345 NN denotes extension
T3999 319-320 DT denotes a
T3998 316-318 IN denotes by
T3997 303-306 VBP denotes are
T3996 285-286 HYPH denotes -
T3995 286-294 JJ denotes terminal
T3994 284-285 NN denotes C
T3993 295-302 NN denotes peptide
T3992 280-283 DT denotes the
T3991 277-279 IN denotes of
T3990 265-270 NN denotes amino
T3989 263-264 CD denotes 5
T3988 258-262 JJ denotes last
T3987 271-276 NNS denotes acids
T3986 254-257 DT denotes the
T3985 248-253 WDT denotes which
T3984 307-315 VBN denotes replaced
T3983 245-247 IN denotes in
T3982 237-244 NN denotes protein
T3981 235-236 DT denotes a
T3980 224-234 VBG denotes generating
T3979 222-224 , denotes ,
T3978 203-215 JJ denotes untranslated
T3977 201-202 SYM denotes '
T3976 200-201 CD denotes 3
T3975 216-222 NN denotes region
T3974 196-199 DT denotes the
T3973 191-195 IN denotes into
T3972 182-183 HYPH denotes -
T3971 178-182 NN denotes read
T3970 183-190 NN denotes through
T3969 164-177 JJ denotes translational
T3968 158-163 VB denotes cause
T3967 155-157 TO denotes to
T3966 145-154 VBN denotes predicted
T3965 142-144 VBZ denotes is
T3964 138-141 CC denotes and
T3963 127-131 NN denotes stop
T3962 122-126 NN denotes PAX6
T3961 132-137 NN denotes codon
T3960 118-121 DT denotes the
T3959 111-117 IN denotes before
T3958 106-110 RB denotes just
T3957 99-105 VBZ denotes occurs
T3956 80-81 HYPH denotes -
T3955 81-89 VBG denotes shifting
T3954 75-80 NN denotes frame
T3953 90-98 NN denotes deletion
T3952 70-74 DT denotes This
T3951 69-346 sentence denotes This frame-shifting deletion occurs just before the PAX6 stop codon and is predicted to cause translational read-through into the 3' untranslated region, generating a protein in which the last 5 amino acids of the C-terminal peptide are replaced by a 103 amino acid-extension.
T3950 68-69 . denotes .
T3949 67-68 -RRB- denotes ]
T3948 65-67 CD denotes 28
T3947 64-65 -LRB- denotes [
T3946 48-56 NN denotes aniridia
T3945 57-63 NN denotes family
T3944 45-47 DT denotes an
T3943 42-44 IN denotes in
T3942 32-35 VBD denotes was
T3941 30-31 -RRB- denotes )
T3940 21-30 NN denotes 1615del10
T3939 20-21 -LRB- denotes (
T3938 36-41 VBN denotes found
T3937 4-10 JJ denotes second
T3936 11-19 NN denotes mutation
T3935 0-3 DT denotes The
R2416 T3935 T3936 det The,mutation
R2417 T3936 T3938 nsubjpass mutation,found
R2418 T3937 T3936 amod second,mutation
R2419 T3939 T3936 punct (,mutation
R2420 T3940 T3936 appos 1615del10,mutation
R2421 T3941 T3936 punct ),mutation
R2422 T3942 T3938 auxpass was,found
R2423 T3943 T3938 prep in,found
R2424 T3944 T3945 det an,family
R2425 T3945 T3943 pobj family,in
R2426 T3946 T3945 compound aniridia,family
R2427 T3947 T3948 punct [,28
R2428 T3948 T3938 parataxis 28,found
R2429 T3949 T3948 punct ],28
R2430 T3950 T3938 punct .,found
R2431 T3952 T3953 det This,deletion
R2432 T3953 T3957 nsubj deletion,occurs
R2433 T3954 T3955 npadvmod frame,shifting
R2434 T3955 T3953 amod shifting,deletion
R2435 T3956 T3955 punct -,shifting
R2436 T3958 T3959 advmod just,before
R2437 T3959 T3957 prep before,occurs
R2438 T3960 T3961 det the,codon
R2439 T3961 T3959 pobj codon,before
R2440 T3962 T3961 compound PAX6,codon
R2441 T3963 T3961 compound stop,codon
R2442 T3964 T3957 cc and,occurs
R2443 T3965 T3966 auxpass is,predicted
R2444 T3966 T3957 conj predicted,occurs
R2445 T3967 T3968 aux to,cause
R2446 T3968 T3966 xcomp cause,predicted
R2447 T3969 T3970 amod translational,through
R2448 T3970 T3968 dobj through,cause
R2449 T3971 T3970 compound read,through
R2450 T3972 T3970 punct -,through
R2451 T3973 T3970 prep into,through
R2452 T3974 T3975 det the,region
R2453 T3975 T3973 pobj region,into
R2454 T3976 T3975 nummod 3,region
R2455 T3977 T3976 punct ',3
R2456 T3978 T3975 amod untranslated,region
R2457 T3979 T3968 punct ", ",cause
R2458 T3980 T3968 advcl generating,cause
R2459 T3981 T3982 det a,protein
R2460 T3982 T3980 dobj protein,generating
R2461 T3983 T3984 prep in,replaced
R2462 T3984 T3982 relcl replaced,protein
R2463 T3985 T3983 pobj which,in
R2464 T3986 T3987 det the,acids
R2465 T3987 T3984 nsubjpass acids,replaced
R2466 T3988 T3987 amod last,acids
R2467 T3989 T3987 nummod 5,acids
R2468 T3990 T3987 compound amino,acids
R2469 T3991 T3987 prep of,acids
R2470 T3992 T3993 det the,peptide
R2471 T3993 T3991 pobj peptide,of
R2472 T3994 T3995 npadvmod C,terminal
R2473 T3995 T3993 amod terminal,peptide
R2474 T3996 T3995 punct -,terminal
R2475 T3997 T3984 auxpass are,replaced
R2476 T3998 T3984 agent by,replaced
R2477 T3999 T4000 det a,extension
R2478 T4000 T3998 pobj extension,by
R2479 T4001 T4002 nummod 103,acid
R2480 T4002 T4000 compound acid,extension
R2481 T4003 T4002 compound amino,acid
R2482 T4004 T4000 punct -,extension
R2483 T4005 T3957 punct .,occurs
R2484 T4007 T4008 amod Affected,individuals
R2485 T4008 T4009 nsubj individuals,showed
R2486 T4010 T4008 prep in,individuals
R2487 T4011 T4012 det this,family
R2488 T4012 T4010 pobj family,in
R2489 T4013 T4014 amod unusual,traits
R2490 T4014 T4009 dobj traits,showed
R2491 T4015 T4014 amod neurobehavioural,traits
R2492 T4016 T4014 prep including,traits
R2493 T4017 T4018 amod impaired,cognition
R2494 T4018 T4016 pobj cognition,including
R2495 T4019 T4018 amod social,cognition
R2496 T4020 T4018 cc and,cognition
R2497 T4021 T4022 amod poor,inhibition
R2498 T4022 T4018 conj inhibition,cognition
R2499 T4023 T4022 amod verbal,inhibition
R2500 T4024 T4025 punct [,28
R2501 T4025 T4009 parataxis 28,showed
R2502 T4026 T4025 punct ],28
R2503 T4027 T4009 punct .,showed
R2504 T4029 T4030 compound MRI,analysis
R2505 T4030 T4031 nsubj analysis,revealed
R2506 T4032 T4033 amod grey,matter
R2507 T4033 T4034 compound matter,abnormalities
R2508 T4034 T4031 dobj abnormalities,revealed
R2509 T4035 T4034 prep in,abnormalities
R2510 T4036 T4037 det the,lobe
R2511 T4037 T4035 pobj lobe,in
R2512 T4038 T4037 amod frontal,lobe
R2513 T4039 T4037 punct ", ",lobe
R2514 T4040 T4041 amod temporal,lobe
R2515 T4041 T4037 conj lobe,lobe
R2516 T4042 T4041 cc and,lobe
R2517 T4043 T4041 conj cerebellum,lobe
R2518 T4044 T4034 punct ", ",abnormalities
R2519 T4045 T4034 cc and,abnormalities
R2520 T4046 T4047 amod white,matter
R2521 T4047 T4048 compound matter,deficits
R2522 T4048 T4034 conj deficits,abnormalities
R2523 T4049 T4048 prep in,deficits
R2524 T4050 T4051 det the,callosum
R2525 T4051 T4049 pobj callosum,in
R2526 T4052 T4051 compound corpus,callosum
R2527 T4053 T4054 punct [,13
R2528 T4054 T4031 parataxis 13,revealed
R2529 T4055 T4054 punct ],13
R2530 T4056 T4031 punct .,revealed

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T3340 623-638 UBERON:0002336 denotes corpus callosum
T3339 594-606 UBERON:0002316 denotes white matter
T3338 578-588 UBERON:0002037 denotes cerebellum
T3337 560-573 UBERON:0001871 denotes temporal lobe
T3336 546-558 UBERON:0016525 denotes frontal lobe
T3335 513-524 UBERON:0002020 denotes grey matter
T3334 448-457 GO:0050890 denotes cognition
T3333 356-367 NCBITaxon:1 denotes individuals
T3332 325-335 CHEBI_SO_EXT:amino_acid denotes amino acid
T3331 307-315 SO_EXT:sequence_substitution_process denotes replaced
T3330 295-302 CHEBI_SO_EXT:peptide_or_peptide_region denotes peptide
T3329 284-294 CHEBI_SO_EXT:C_terminus_or_C_terminal_region denotes C-terminal
T3328 265-276 CHEBI_SO_EXT:amino_acid denotes amino acids
T3327 237-244 CHEBI_PR_EXT:protein denotes protein
T3326 205-215 GO:0006412 denotes translated
T3325 200-222 SO_EXT:0000205 denotes 3' untranslated region
T3324 164-190 GO:0006451 denotes translational read-through
T3323 127-137 SO_EXT:0000319 denotes stop codon
T3322 122-126 PR_EXT:000012318 denotes PAX6
T3321 90-98 SO_EXT:sequence_deletion_entity_or_process denotes deletion
T3320 75-89 GO_SO_EXT:frameshift_entity_or_process denotes frame-shifting
T3319 11-19 SO_EXT:sequence_alteration_entity_or_process denotes mutation

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T3201 623-638 UBERON:0002336 denotes corpus callosum
T3200 594-606 UBERON:0002316 denotes white matter
T3199 578-588 UBERON:0002037 denotes cerebellum
T3198 560-573 UBERON:0001871 denotes temporal lobe
T3197 546-558 UBERON:0016525 denotes frontal lobe
T3196 513-524 UBERON:0002020 denotes grey matter
T3195 448-457 GO:0050890 denotes cognition
T3194 356-367 NCBITaxon:1 denotes individuals
T3193 205-215 GO:0006412 denotes translated
T3192 200-222 SO:0000205 denotes 3' untranslated region
T3191 164-190 GO:0006451 denotes translational read-through
T3190 127-137 SO:0000319 denotes stop codon
T3189 122-126 PR:000012318 denotes PAX6