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PMC:1208879 / 14204-14879 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T8837 0-8 JJ denotes Pairwise
T8838 21-26 NNS denotes tests
T8839 9-20 NN denotes interaction
T8840 27-34 IN denotes between
T8841 35-41 JJ denotes normal
T8842 58-68 NNS denotes constructs
T8843 42-45 CC denotes and
T8844 46-52 JJ denotes mutant
T8845 53-57 NN denotes PAX6
T8846 69-72 CC denotes and
T8847 73-79 NN denotes HOMER3
T8848 79-81 , denotes ,
T8849 81-86 NN denotes DNCL1
T8850 87-90 CC denotes and
T8851 91-97 NN denotes TRIM11
T8852 97-98 SYM denotes .
T8853 98-272 sentence denotes +++: strong interaction; ++: moderate interaction; +: weak interaction; (+) borderline interaction with one or two reporters activated at very low levels; 0: no interaction.
T8854 99-102 SYM denotes +++
T8855 102-104 : denotes :
T8856 104-110 JJ denotes strong
T8857 111-122 NN denotes interaction
T8858 122-123 , denotes ;
T8859 124-126 SYM denotes ++
T8860 126-128 : denotes :
T8861 128-136 JJ denotes moderate
T8862 137-148 NN denotes interaction
T8863 148-149 , denotes ;
T8864 150-151 SYM denotes +
T8865 151-153 : denotes :
T8866 153-157 JJ denotes weak
T8867 158-169 NN denotes interaction
T8868 169-170 , denotes ;
T8869 171-172 -LRB- denotes (
T8870 173-174 -RRB- denotes )
T8871 172-173 SYM denotes +
T8872 175-185 JJ denotes borderline
T8873 186-197 NN denotes interaction
T8874 198-202 IN denotes with
T8875 203-206 CD denotes one
T8876 214-223 NNS denotes reporters
T8877 207-209 CC denotes or
T8878 210-213 CD denotes two
T8879 224-233 VBN denotes activated
T8880 234-236 IN denotes at
T8881 237-241 RB denotes very
T8882 242-245 JJ denotes low
T8883 246-252 NNS denotes levels
T8884 252-253 , denotes ;
T8885 254-255 CD denotes 0
T8886 255-257 : denotes :
T8887 257-259 DT denotes no
T8888 260-271 NN denotes interaction
T8889 271-272 . denotes .
T8890 272-565 sentence denotes PAX6PST, PAX6 PST domain; PAX6CTP, PAX6 C-terminal peptide; PAX6PST-CT, PAX6 PST domain minus the C-terminal peptide; PAX6PST/Q422R, PAX6 PST domain with the Q422R mutation; PAX6PST/X423L, PAX6 PST domain with the X423L mutation, PAX6PST/1615del, PAX6 PST domain with the 1615 del10 mutation.
T8891 273-280 NN denotes PAX6PST
T8892 280-282 , denotes ,
T8893 282-286 NN denotes PAX6
T8894 291-297 NN denotes domain
T8895 287-290 NN denotes PST
T8896 297-298 , denotes ;
T8897 299-306 NN denotes PAX6CTP
T8898 306-308 , denotes ,
T8899 308-312 NN denotes PAX6
T8900 324-331 NN denotes peptide
T8901 313-314 NN denotes C
T8902 315-323 JJ denotes terminal
T8903 314-315 HYPH denotes -
T8904 331-332 , denotes ;
T8905 333-340 NN denotes PAX6PST
T8906 341-343 NN denotes CT
T8907 340-341 HYPH denotes -
T8908 343-345 , denotes ,
T8909 345-349 NN denotes PAX6
T8910 354-360 NN denotes domain
T8911 350-353 NN denotes PST
T8912 361-366 CC denotes minus
T8913 367-370 DT denotes the
T8914 382-389 NN denotes peptide
T8915 371-372 NN denotes C
T8916 373-381 JJ denotes terminal
T8917 372-373 HYPH denotes -
T8918 389-390 , denotes ;
T8919 391-398 NN denotes PAX6PST
T8920 399-404 NN denotes Q422R
T8921 398-399 HYPH denotes /
T8922 404-406 , denotes ,
T8923 406-410 NN denotes PAX6
T8924 415-421 NN denotes domain
T8925 411-414 NN denotes PST
T8926 422-426 IN denotes with
T8927 427-430 DT denotes the
T8928 437-445 NN denotes mutation
T8929 431-436 NN denotes Q422R
T8930 445-446 , denotes ;
T8931 447-454 NN denotes PAX6PST
T8932 455-460 NN denotes X423L
T8933 454-455 HYPH denotes /
T8934 460-462 , denotes ,
T8935 462-466 NN denotes PAX6
T8936 471-477 NN denotes domain
T8937 467-470 NN denotes PST
T8938 478-482 IN denotes with
T8939 483-486 DT denotes the
T8940 493-501 NN denotes mutation
T8941 487-492 NN denotes X423L
T8942 501-503 , denotes ,
T8943 503-510 NN denotes PAX6PST
T8944 511-518 NN denotes 1615del
T8945 510-511 HYPH denotes /
T8946 518-520 , denotes ,
T8947 520-524 NN denotes PAX6
T8948 529-535 NN denotes domain
T8949 525-528 NN denotes PST
T8950 536-540 IN denotes with
T8951 541-544 DT denotes the
T8952 556-564 NN denotes mutation
T8953 545-549 CD denotes 1615
T8954 550-555 NN denotes del10
T8955 564-565 . denotes .
T8956 565-675 sentence denotes HOMER3-FL, HOMER3 full-length clone; HOMER3-Tr, truncated HOMER3 clone lacking the N-terminal 70 amino acids.
T8957 566-572 NN denotes HOMER3
T8958 573-575 NN denotes FL
T8959 572-573 HYPH denotes -
T8960 575-577 , denotes ,
T8961 577-583 NN denotes HOMER3
T8962 596-601 NN denotes clone
T8963 584-588 JJ denotes full
T8964 589-595 NN denotes length
T8965 588-589 HYPH denotes -
T8966 601-602 , denotes ;
T8967 603-609 NN denotes HOMER3
T8968 610-612 NN denotes Tr
T8969 609-610 HYPH denotes -
T8970 612-614 , denotes ,
T8971 614-623 VBN denotes truncated
T8972 631-636 NN denotes clone
T8973 624-630 NN denotes HOMER3
T8974 637-644 VBG denotes lacking
T8975 645-648 DT denotes the
T8976 669-674 NNS denotes acids
T8977 649-650 NN denotes N
T8978 651-659 JJ denotes terminal
T8979 650-651 HYPH denotes -
T8980 660-662 CD denotes 70
T8981 663-668 NN denotes amino
T8982 674-675 . denotes .
R5617 T8837 T8838 amod Pairwise,tests
R5618 T8839 T8838 compound interaction,tests
R5619 T8840 T8838 prep between,tests
R5620 T8841 T8842 amod normal,constructs
R5621 T8842 T8840 pobj constructs,between
R5622 T8843 T8841 cc and,normal
R5623 T8844 T8841 conj mutant,normal
R5624 T8845 T8842 compound PAX6,constructs
R5625 T8846 T8842 cc and,constructs
R5626 T8847 T8842 conj HOMER3,constructs
R5627 T8848 T8847 punct ", ",HOMER3
R5628 T8849 T8847 conj DNCL1,HOMER3
R5629 T8850 T8849 cc and,DNCL1
R5630 T8851 T8849 conj TRIM11,DNCL1
R5631 T8852 T8838 punct .,tests
R5632 T8855 T8854 punct : ,+++
R5633 T8856 T8857 amod strong,interaction
R5634 T8857 T8854 appos interaction,+++
R5635 T8858 T8854 punct ;,+++
R5636 T8859 T8854 appos ++,+++
R5637 T8860 T8859 punct : ,++
R5638 T8861 T8862 amod moderate,interaction
R5639 T8862 T8859 appos interaction,++
R5640 T8863 T8854 punct ;,+++
R5641 T8864 T8854 appos +,+++
R5642 T8865 T8864 punct : ,+
R5643 T8866 T8867 amod weak,interaction
R5644 T8867 T8864 appos interaction,+
R5645 T8868 T8854 punct ;,+++
R5646 T8869 T8870 punct (,)
R5647 T8870 T8854 appos ),+++
R5648 T8871 T8870 punct +,)
R5649 T8872 T8873 amod borderline,interaction
R5650 T8873 T8870 appos interaction,)
R5651 T8874 T8873 prep with,interaction
R5652 T8875 T8876 nummod one,reporters
R5653 T8876 T8874 pobj reporters,with
R5654 T8877 T8875 cc or,one
R5655 T8878 T8875 conj two,one
R5656 T8879 T8876 acl activated,reporters
R5657 T8880 T8879 prep at,activated
R5658 T8881 T8882 advmod very,low
R5659 T8882 T8883 amod low,levels
R5660 T8883 T8880 pobj levels,at
R5661 T8884 T8854 punct ;,+++
R5662 T8885 T8854 appos 0,+++
R5663 T8886 T8885 punct : ,0
R5664 T8887 T8888 det no,interaction
R5665 T8888 T8885 appos interaction,0
R5666 T8889 T8854 punct .,+++
R5667 T8892 T8891 punct ", ",PAX6PST
R5668 T8893 T8894 compound PAX6,domain
R5669 T8894 T8891 appos domain,PAX6PST
R5670 T8895 T8894 compound PST,domain
R5671 T8896 T8891 punct ;,PAX6PST
R5672 T8897 T8891 appos PAX6CTP,PAX6PST
R5673 T8898 T8897 punct ", ",PAX6CTP
R5674 T8899 T8900 nmod PAX6,peptide
R5675 T8900 T8897 appos peptide,PAX6CTP
R5676 T8901 T8902 npadvmod C,terminal
R5677 T8902 T8900 amod terminal,peptide
R5678 T8903 T8902 punct -,terminal
R5679 T8904 T8891 punct ;,PAX6PST
R5680 T8905 T8906 compound PAX6PST,CT
R5681 T8906 T8891 appos CT,PAX6PST
R5682 T8907 T8906 punct -,CT
R5683 T8908 T8906 punct ", ",CT
R5684 T8909 T8910 compound PAX6,domain
R5685 T8910 T8906 appos domain,CT
R5686 T8911 T8910 compound PST,domain
R5687 T8912 T8910 cc minus,domain
R5688 T8913 T8914 det the,peptide
R5689 T8914 T8910 conj peptide,domain
R5690 T8915 T8916 npadvmod C,terminal
R5691 T8916 T8914 amod terminal,peptide
R5692 T8917 T8916 punct -,terminal
R5693 T8918 T8891 punct ;,PAX6PST
R5694 T8919 T8920 compound PAX6PST,Q422R
R5695 T8920 T8891 appos Q422R,PAX6PST
R5696 T8921 T8920 punct /,Q422R
R5697 T8922 T8920 punct ", ",Q422R
R5698 T8923 T8924 compound PAX6,domain
R5699 T8924 T8920 appos domain,Q422R
R5700 T8925 T8924 compound PST,domain
R5701 T8926 T8924 prep with,domain
R5702 T8927 T8928 det the,mutation
R5703 T8928 T8926 pobj mutation,with
R5704 T8929 T8928 compound Q422R,mutation
R5705 T8930 T8891 punct ;,PAX6PST
R5706 T8931 T8932 compound PAX6PST,X423L
R5707 T8932 T8891 appos X423L,PAX6PST
R5708 T8933 T8932 punct /,X423L
R5709 T8934 T8932 punct ", ",X423L
R5710 T8935 T8936 compound PAX6,domain
R5711 T8936 T8932 appos domain,X423L
R5712 T8937 T8936 compound PST,domain
R5713 T8938 T8936 prep with,domain
R5714 T8939 T8940 det the,mutation
R5715 T8940 T8938 pobj mutation,with
R5716 T8941 T8940 compound X423L,mutation
R5717 T8942 T8891 punct ", ",PAX6PST
R5718 T8943 T8944 compound PAX6PST,1615del
R5719 T8944 T8891 appos 1615del,PAX6PST
R5720 T8945 T8944 punct /,1615del
R5721 T8946 T8944 punct ", ",1615del
R5722 T8947 T8948 compound PAX6,domain
R5723 T8948 T8944 appos domain,1615del
R5724 T8949 T8948 compound PST,domain
R5725 T8950 T8948 prep with,domain
R5726 T8951 T8952 det the,mutation
R5727 T8952 T8950 pobj mutation,with
R5728 T8953 T8952 nummod 1615,mutation
R5729 T8954 T8952 compound del10,mutation
R5730 T8955 T8891 punct .,PAX6PST
R5731 T8957 T8958 compound HOMER3,FL
R5732 T8959 T8958 punct -,FL
R5733 T8960 T8958 punct ", ",FL
R5734 T8961 T8962 nmod HOMER3,clone
R5735 T8962 T8958 appos clone,FL
R5736 T8963 T8964 amod full,length
R5737 T8964 T8962 compound length,clone
R5738 T8965 T8964 punct -,length
R5739 T8966 T8958 punct ;,FL
R5740 T8967 T8968 compound HOMER3,Tr
R5741 T8968 T8958 appos Tr,FL
R5742 T8969 T8968 punct -,Tr
R5743 T8970 T8968 punct ", ",Tr
R5744 T8971 T8972 amod truncated,clone
R5745 T8972 T8968 appos clone,Tr
R5746 T8973 T8972 compound HOMER3,clone
R5747 T8974 T8972 acl lacking,clone
R5748 T8975 T8976 det the,acids
R5749 T8976 T8974 dobj acids,lacking
R5750 T8977 T8978 npadvmod N,terminal
R5751 T8978 T8976 amod terminal,acids
R5752 T8979 T8978 punct -,terminal
R5753 T8980 T8976 nummod 70,acids
R5754 T8981 T8976 compound amino,acids
R5755 T8982 T8958 punct .,FL

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T8803 46-52 SO_EXT:sequence_altered_entity_or_alteration_process denotes mutant
T8804 53-57 PR_EXT:000012318 denotes PAX6
T8805 58-68 SO_EXT:engineered_biological_sequence denotes constructs
T8806 73-79 PR_EXT:000008680 denotes HOMER3
T8807 81-86 PR_EXT:000002325 denotes DNCL1
T8808 91-97 PR_EXT:000016642 denotes TRIM11
T8809 282-286 PR_EXT:000012318 denotes PAX6
T8810 291-297 SO_EXT:0000417 denotes domain
T8811 308-312 PR_EXT:000012318 denotes PAX6
T8812 313-323 CHEBI_SO_EXT:C_terminus_or_C_terminal_region denotes C-terminal
T8813 324-331 CHEBI_SO_EXT:peptide_or_peptide_region denotes peptide
T8814 345-349 PR_EXT:000012318 denotes PAX6
T8815 354-360 SO_EXT:0000417 denotes domain
T8816 371-381 CHEBI_SO_EXT:C_terminus_or_C_terminal_region denotes C-terminal
T8817 382-389 CHEBI_SO_EXT:peptide_or_peptide_region denotes peptide
T8818 406-410 PR_EXT:000012318 denotes PAX6
T8819 415-421 SO_EXT:0000417 denotes domain
T8820 437-445 SO_EXT:sequence_alteration_entity_or_process denotes mutation
T8821 462-466 PR_EXT:000012318 denotes PAX6
T8822 471-477 SO_EXT:0000417 denotes domain
T8823 493-501 SO_EXT:sequence_alteration_entity_or_process denotes mutation
T8824 520-524 PR_EXT:000012318 denotes PAX6
T8825 529-535 SO_EXT:0000417 denotes domain
T8826 556-564 SO_EXT:sequence_alteration_entity_or_process denotes mutation
T8827 566-572 PR_EXT:000008680 denotes HOMER3
T8828 577-583 PR_EXT:000008680 denotes HOMER3
T8829 596-601 SO_EXT:sequence_cloned_entity denotes clone
T8830 603-609 PR_EXT:000008680 denotes HOMER3
T8831 610-612 SO_EXT:sequence_truncation_entity_or_process denotes Tr
T8832 614-623 SO_EXT:sequence_truncation_process denotes truncated
T8833 624-630 PR_EXT:000008680 denotes HOMER3
T8834 631-636 SO_EXT:sequence_cloned_entity denotes clone
T8835 649-659 CHEBI_SO_EXT:N_terminus_or_N_terminal_region denotes N-terminal
T8836 663-674 CHEBI_SO_EXT:amino_acid denotes amino acids

craft-ca-core-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T8784 53-57 PR:000012318 denotes PAX6
T8785 73-79 PR:000008680 denotes HOMER3
T8786 81-86 PR:000002325 denotes DNCL1
T8787 91-97 PR:000016642 denotes TRIM11
T8788 282-286 PR:000012318 denotes PAX6
T8789 291-297 SO:0000417 denotes domain
T8790 308-312 PR:000012318 denotes PAX6
T8791 345-349 PR:000012318 denotes PAX6
T8792 354-360 SO:0000417 denotes domain
T8793 406-410 PR:000012318 denotes PAX6
T8794 415-421 SO:0000417 denotes domain
T8795 462-466 PR:000012318 denotes PAX6
T8796 471-477 SO:0000417 denotes domain
T8797 520-524 PR:000012318 denotes PAX6
T8798 529-535 SO:0000417 denotes domain
T8799 566-572 PR:000008680 denotes HOMER3
T8800 577-583 PR:000008680 denotes HOMER3
T8801 603-609 PR:000008680 denotes HOMER3
T8802 624-630 PR:000008680 denotes HOMER3