PMC:1208879 / 13590-14194
Annnotations
craft-sa-dev
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T8632 | 10-14 | NN | denotes | LacZ |
T8633 | 29-39 | NN | denotes | activation |
T8634 | 15-23 | NN | denotes | reporter |
T8635 | 24-28 | NN | denotes | gene |
T8636 | 40-42 | IN | denotes | in |
T8637 | 43-51 | JJ | denotes | pairwise |
T8638 | 52-57 | NNS | denotes | tests |
T8639 | 57-58 | . | denotes | . |
T8640 | 58-159 | sentence | denotes | pPC86 constructs are shown across the top, and pDBLeu constructs are shown down the right hand side. |
T8641 | 59-64 | NN | denotes | pPC86 |
T8642 | 65-75 | NNS | denotes | constructs |
T8643 | 80-85 | VBN | denotes | shown |
T8644 | 76-79 | VBP | denotes | are |
T8645 | 86-92 | IN | denotes | across |
T8646 | 93-96 | DT | denotes | the |
T8647 | 97-100 | NN | denotes | top |
T8648 | 100-102 | , | denotes | , |
T8649 | 102-105 | CC | denotes | and |
T8650 | 106-112 | NN | denotes | pDBLeu |
T8651 | 113-123 | NNS | denotes | constructs |
T8652 | 128-133 | VBN | denotes | shown |
T8653 | 124-127 | VBP | denotes | are |
T8654 | 134-138 | IN | denotes | down |
T8655 | 139-142 | DT | denotes | the |
T8656 | 154-158 | NN | denotes | side |
T8657 | 143-148 | JJ | denotes | right |
T8658 | 149-153 | NN | denotes | hand |
T8659 | 158-159 | . | denotes | . |
T8660 | 159-420 | sentence | denotes | PAX6PST, PAX6 PST domain; PAX6PST/Q422R, PAX6 PST domain with the Q422R mutation; PAX6PST/X423L, PAX6 PST domain with the X423L mutation, PAX6PST/1615del10, PAX6 PST domain with the 1615 del10 mutation; PAX6PST-CT, PAX6 PST domain minus the C-terminal peptide. |
T8661 | 160-167 | NN | denotes | PAX6PST |
T8662 | 167-169 | , | denotes | , |
T8663 | 169-173 | NN | denotes | PAX6 |
T8664 | 178-184 | NN | denotes | domain |
T8665 | 174-177 | NN | denotes | PST |
T8666 | 184-185 | : | denotes | ; |
T8667 | 186-193 | NN | denotes | PAX6PST |
T8668 | 194-199 | NN | denotes | Q422R |
T8669 | 193-194 | HYPH | denotes | / |
T8670 | 199-201 | , | denotes | , |
T8671 | 201-205 | NN | denotes | PAX6 |
T8672 | 210-216 | NN | denotes | domain |
T8673 | 206-209 | NN | denotes | PST |
T8674 | 217-221 | IN | denotes | with |
T8675 | 222-225 | DT | denotes | the |
T8676 | 232-240 | NN | denotes | mutation |
T8677 | 226-231 | NN | denotes | Q422R |
T8678 | 240-241 | : | denotes | ; |
T8679 | 242-249 | NN | denotes | PAX6PST |
T8680 | 250-255 | NN | denotes | X423L |
T8681 | 249-250 | HYPH | denotes | / |
T8682 | 255-257 | , | denotes | , |
T8683 | 257-261 | NN | denotes | PAX6 |
T8684 | 266-272 | NN | denotes | domain |
T8685 | 262-265 | NN | denotes | PST |
T8686 | 273-277 | IN | denotes | with |
T8687 | 278-281 | DT | denotes | the |
T8688 | 288-296 | NN | denotes | mutation |
T8689 | 282-287 | NN | denotes | X423L |
T8690 | 296-298 | , | denotes | , |
T8691 | 298-305 | NN | denotes | PAX6PST |
T8692 | 306-315 | NN | denotes | 1615del10 |
T8693 | 305-306 | HYPH | denotes | / |
T8694 | 315-317 | , | denotes | , |
T8695 | 317-321 | NN | denotes | PAX6 |
T8696 | 326-332 | NN | denotes | domain |
T8697 | 322-325 | NN | denotes | PST |
T8698 | 333-337 | IN | denotes | with |
T8699 | 338-341 | DT | denotes | the |
T8700 | 353-361 | NN | denotes | mutation |
T8701 | 342-346 | CD | denotes | 1615 |
T8702 | 347-352 | NN | denotes | del10 |
T8703 | 361-362 | : | denotes | ; |
T8704 | 363-370 | NN | denotes | PAX6PST |
T8705 | 371-373 | NN | denotes | CT |
T8706 | 370-371 | HYPH | denotes | - |
T8707 | 373-375 | , | denotes | , |
T8708 | 375-379 | NN | denotes | PAX6 |
T8709 | 380-383 | NN | denotes | PST |
T8710 | 384-390 | NN | denotes | domain |
T8711 | 391-396 | CC | denotes | minus |
T8712 | 397-400 | DT | denotes | the |
T8713 | 412-419 | NN | denotes | peptide |
T8714 | 401-402 | NN | denotes | C |
T8715 | 403-411 | JJ | denotes | terminal |
T8716 | 402-403 | HYPH | denotes | - |
T8717 | 419-420 | . | denotes | . |
T8718 | 420-488 | sentence | denotes | 'Truncated HOMER3' is HOMER3 lacking the N-terminal 70 amino acids. |
T8719 | 421-422 | `` | denotes | ' |
T8720 | 440-442 | VBZ | denotes | is |
T8721 | 422-431 | VBN | denotes | Truncated |
T8722 | 432-438 | NN | denotes | HOMER3 |
T8723 | 438-439 | '' | denotes | ' |
T8724 | 443-449 | NN | denotes | HOMER3 |
T8725 | 450-457 | VBG | denotes | lacking |
T8726 | 458-461 | DT | denotes | the |
T8727 | 482-487 | NNS | denotes | acids |
T8728 | 462-463 | NN | denotes | N |
T8729 | 464-472 | JJ | denotes | terminal |
T8730 | 463-464 | HYPH | denotes | - |
T8731 | 473-475 | CD | denotes | 70 |
T8732 | 476-481 | NN | denotes | amino |
T8733 | 487-488 | . | denotes | . |
T8734 | 488-542 | sentence | denotes | Five control strains are shown for comparison (left). |
T8735 | 489-493 | CD | denotes | Five |
T8736 | 502-509 | NNS | denotes | strains |
T8737 | 494-501 | NN | denotes | control |
T8738 | 514-519 | VBN | denotes | shown |
T8739 | 510-513 | VBP | denotes | are |
T8740 | 520-523 | IN | denotes | for |
T8741 | 524-534 | NN | denotes | comparison |
T8742 | 535-536 | -LRB- | denotes | ( |
T8743 | 536-540 | JJ | denotes | left |
T8744 | 540-541 | -RRB- | denotes | ) |
T8745 | 541-542 | . | denotes | . |
T8746 | 542-604 | sentence | denotes | These range from non-interactor (A) to strong interactor (E). |
T8747 | 543-548 | DT | denotes | These |
T8748 | 549-554 | VBP | denotes | range |
T8749 | 555-559 | IN | denotes | from |
T8750 | 560-574 | NN | denotes | non-interactor |
T8751 | 575-576 | -LRB- | denotes | ( |
T8752 | 576-577 | NN | denotes | A |
T8753 | 577-578 | -RRB- | denotes | ) |
T8754 | 579-581 | IN | denotes | to |
T8755 | 582-588 | JJ | denotes | strong |
T8756 | 589-599 | NN | denotes | interactor |
T8757 | 600-601 | -LRB- | denotes | ( |
T8758 | 601-602 | NN | denotes | E |
T8759 | 602-603 | -RRB- | denotes | ) |
T8760 | 603-604 | . | denotes | . |
R5499 | T8632 | T8633 | compound | LacZ,activation |
R5500 | T8634 | T8635 | compound | reporter,gene |
R5501 | T8635 | T8633 | compound | gene,activation |
R5502 | T8636 | T8633 | prep | in,activation |
R5503 | T8637 | T8638 | amod | pairwise,tests |
R5504 | T8638 | T8636 | pobj | tests,in |
R5505 | T8639 | T8633 | punct | .,activation |
R5506 | T8641 | T8642 | compound | pPC86,constructs |
R5507 | T8642 | T8643 | nsubjpass | constructs,shown |
R5508 | T8644 | T8643 | auxpass | are,shown |
R5509 | T8645 | T8643 | prep | across,shown |
R5510 | T8646 | T8647 | det | the,top |
R5511 | T8647 | T8645 | pobj | top,across |
R5512 | T8648 | T8643 | punct | ", ",shown |
R5513 | T8649 | T8643 | cc | and,shown |
R5514 | T8650 | T8651 | compound | pDBLeu,constructs |
R5515 | T8651 | T8652 | nsubjpass | constructs,shown |
R5516 | T8652 | T8643 | conj | shown,shown |
R5517 | T8653 | T8652 | auxpass | are,shown |
R5518 | T8654 | T8652 | prep | down,shown |
R5519 | T8655 | T8656 | det | the,side |
R5520 | T8656 | T8654 | pobj | side,down |
R5521 | T8657 | T8658 | amod | right,hand |
R5522 | T8658 | T8656 | compound | hand,side |
R5523 | T8659 | T8652 | punct | .,shown |
R5524 | T8662 | T8661 | punct | ", ",PAX6PST |
R5525 | T8663 | T8664 | compound | PAX6,domain |
R5526 | T8664 | T8661 | appos | domain,PAX6PST |
R5527 | T8665 | T8664 | compound | PST,domain |
R5528 | T8666 | T8661 | punct | ;,PAX6PST |
R5529 | T8667 | T8668 | compound | PAX6PST,Q422R |
R5530 | T8668 | T8661 | appos | Q422R,PAX6PST |
R5531 | T8669 | T8668 | punct | /,Q422R |
R5532 | T8670 | T8668 | punct | ", ",Q422R |
R5533 | T8671 | T8672 | compound | PAX6,domain |
R5534 | T8672 | T8668 | appos | domain,Q422R |
R5535 | T8673 | T8672 | compound | PST,domain |
R5536 | T8674 | T8672 | prep | with,domain |
R5537 | T8675 | T8676 | det | the,mutation |
R5538 | T8676 | T8674 | pobj | mutation,with |
R5539 | T8677 | T8676 | compound | Q422R,mutation |
R5540 | T8678 | T8661 | punct | ;,PAX6PST |
R5541 | T8679 | T8680 | compound | PAX6PST,X423L |
R5542 | T8680 | T8661 | appos | X423L,PAX6PST |
R5543 | T8681 | T8680 | punct | /,X423L |
R5544 | T8682 | T8680 | punct | ", ",X423L |
R5545 | T8683 | T8684 | compound | PAX6,domain |
R5546 | T8684 | T8680 | appos | domain,X423L |
R5547 | T8685 | T8684 | compound | PST,domain |
R5548 | T8686 | T8684 | prep | with,domain |
R5549 | T8687 | T8688 | det | the,mutation |
R5550 | T8688 | T8686 | pobj | mutation,with |
R5551 | T8689 | T8688 | compound | X423L,mutation |
R5552 | T8690 | T8661 | punct | ", ",PAX6PST |
R5553 | T8691 | T8692 | compound | PAX6PST,1615del10 |
R5554 | T8692 | T8661 | appos | 1615del10,PAX6PST |
R5555 | T8693 | T8692 | punct | /,1615del10 |
R5556 | T8694 | T8692 | punct | ", ",1615del10 |
R5557 | T8695 | T8696 | compound | PAX6,domain |
R5558 | T8696 | T8692 | appos | domain,1615del10 |
R5559 | T8697 | T8696 | compound | PST,domain |
R5560 | T8698 | T8696 | prep | with,domain |
R5561 | T8699 | T8700 | det | the,mutation |
R5562 | T8700 | T8698 | pobj | mutation,with |
R5563 | T8701 | T8700 | nummod | 1615,mutation |
R5564 | T8702 | T8700 | compound | del10,mutation |
R5565 | T8703 | T8661 | punct | ;,PAX6PST |
R5566 | T8704 | T8705 | compound | PAX6PST,CT |
R5567 | T8705 | T8661 | appos | CT,PAX6PST |
R5568 | T8706 | T8705 | punct | -,CT |
R5569 | T8707 | T8705 | punct | ", ",CT |
R5570 | T8708 | T8709 | compound | PAX6,PST |
R5571 | T8709 | T8710 | compound | PST,domain |
R5572 | T8710 | T8705 | appos | domain,CT |
R5573 | T8711 | T8710 | cc | minus,domain |
R5574 | T8712 | T8713 | det | the,peptide |
R5575 | T8713 | T8710 | conj | peptide,domain |
R5576 | T8714 | T8715 | npadvmod | C,terminal |
R5577 | T8715 | T8713 | amod | terminal,peptide |
R5578 | T8716 | T8715 | punct | -,terminal |
R5579 | T8717 | T8661 | punct | .,PAX6PST |
R5580 | T8719 | T8720 | punct | ',is |
R5581 | T8721 | T8722 | amod | Truncated,HOMER3 |
R5582 | T8722 | T8720 | nsubj | HOMER3,is |
R5583 | T8723 | T8720 | punct | ',is |
R5584 | T8724 | T8720 | attr | HOMER3,is |
R5585 | T8725 | T8724 | acl | lacking,HOMER3 |
R5586 | T8726 | T8727 | det | the,acids |
R5587 | T8727 | T8725 | dobj | acids,lacking |
R5588 | T8728 | T8729 | npadvmod | N,terminal |
R5589 | T8729 | T8727 | amod | terminal,acids |
R5590 | T8730 | T8729 | punct | -,terminal |
R5591 | T8731 | T8727 | nummod | 70,acids |
R5592 | T8732 | T8727 | compound | amino,acids |
R5593 | T8733 | T8720 | punct | .,is |
R5594 | T8735 | T8736 | nummod | Five,strains |
R5595 | T8736 | T8738 | nsubjpass | strains,shown |
R5596 | T8737 | T8736 | compound | control,strains |
R5597 | T8739 | T8738 | auxpass | are,shown |
R5598 | T8740 | T8738 | prep | for,shown |
R5599 | T8741 | T8740 | pobj | comparison,for |
R5600 | T8742 | T8743 | punct | (,left |
R5601 | T8743 | T8738 | parataxis | left,shown |
R5602 | T8744 | T8743 | punct | ),left |
R5603 | T8745 | T8738 | punct | .,shown |
R5604 | T8747 | T8748 | nsubj | These,range |
R5605 | T8749 | T8748 | prep | from,range |
R5606 | T8750 | T8749 | pobj | non-interactor,from |
R5607 | T8751 | T8752 | punct | (,A |
R5608 | T8752 | T8750 | parataxis | A,non-interactor |
R5609 | T8753 | T8752 | punct | ),A |
R5610 | T8754 | T8749 | prep | to,from |
R5611 | T8755 | T8756 | amod | strong,interactor |
R5612 | T8756 | T8754 | pobj | interactor,to |
R5613 | T8757 | T8758 | punct | (,E |
R5614 | T8758 | T8756 | parataxis | E,interactor |
R5615 | T8759 | T8758 | punct | ),E |
R5616 | T8760 | T8748 | punct | .,range |
craft-ca-core-ex-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T8608 | 10-14 | PR_EXT:000033987 | denotes | LacZ |
T8609 | 24-28 | SO_EXT:0000704 | denotes | gene |
T8610 | 65-75 | SO_EXT:engineered_biological_sequence | denotes | constructs |
T8611 | 113-123 | SO_EXT:engineered_biological_sequence | denotes | constructs |
T8612 | 169-173 | PR_EXT:000012318 | denotes | PAX6 |
T8613 | 178-184 | SO_EXT:0000417 | denotes | domain |
T8614 | 201-205 | PR_EXT:000012318 | denotes | PAX6 |
T8615 | 210-216 | SO_EXT:0000417 | denotes | domain |
T8616 | 232-240 | SO_EXT:sequence_alteration_entity_or_process | denotes | mutation |
T8617 | 257-261 | PR_EXT:000012318 | denotes | PAX6 |
T8618 | 266-272 | SO_EXT:0000417 | denotes | domain |
T8619 | 288-296 | SO_EXT:sequence_alteration_entity_or_process | denotes | mutation |
T8620 | 317-321 | PR_EXT:000012318 | denotes | PAX6 |
T8621 | 326-332 | SO_EXT:0000417 | denotes | domain |
T8622 | 353-361 | SO_EXT:sequence_alteration_entity_or_process | denotes | mutation |
T8623 | 375-379 | PR_EXT:000012318 | denotes | PAX6 |
T8624 | 384-390 | SO_EXT:0000417 | denotes | domain |
T8625 | 401-411 | CHEBI_SO_EXT:C_terminus_or_C_terminal_region | denotes | C-terminal |
T8626 | 412-419 | CHEBI_SO_EXT:peptide_or_peptide_region | denotes | peptide |
T8627 | 422-431 | SO_EXT:sequence_truncation_process | denotes | Truncated |
T8628 | 432-438 | PR_EXT:000008680 | denotes | HOMER3 |
T8629 | 443-449 | PR_EXT:000008680 | denotes | HOMER3 |
T8630 | 462-472 | CHEBI_SO_EXT:N_terminus_or_N_terminal_region | denotes | N-terminal |
T8631 | 476-487 | CHEBI_SO_EXT:amino_acid | denotes | amino acids |
craft-ca-core-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T8594 | 10-14 | PR:000033987 | denotes | LacZ |
T8595 | 24-28 | SO:0000704 | denotes | gene |
T8596 | 169-173 | PR:000012318 | denotes | PAX6 |
T8597 | 178-184 | SO:0000417 | denotes | domain |
T8598 | 201-205 | PR:000012318 | denotes | PAX6 |
T8599 | 210-216 | SO:0000417 | denotes | domain |
T8600 | 257-261 | PR:000012318 | denotes | PAX6 |
T8601 | 266-272 | SO:0000417 | denotes | domain |
T8602 | 317-321 | PR:000012318 | denotes | PAX6 |
T8603 | 326-332 | SO:0000417 | denotes | domain |
T8604 | 375-379 | PR:000012318 | denotes | PAX6 |
T8605 | 384-390 | SO:0000417 | denotes | domain |
T8606 | 432-438 | PR:000008680 | denotes | HOMER3 |
T8607 | 443-449 | PR:000008680 | denotes | HOMER3 |