> top > docs > PMC:1208873 > spans > 32195-32966 > annotations

PMC:1208873 / 32195-32966 JSONTXT

Annnotations TAB JSON ListView MergeView

craft-sa-dev

Id Subject Object Predicate Lexical cue
T7725 0-4 NNS denotes Mice
T7726 5-8 CC denotes and
T7727 9-19 NN denotes genotyping
T7728 19-167 sentence denotes The Hdhex4/5 mice carrying a pGKneo insertion/replacement inactivating mutation in the mouse HD gene homologue have been described previously [10].
T7729 20-23 DT denotes The
T7730 33-37 NNS denotes mice
T7731 24-30 NN denotes Hdhex4
T7732 30-31 HYPH denotes /
T7733 31-32 CD denotes 5
T7734 141-150 VBN denotes described
T7735 38-46 VBG denotes carrying
T7736 47-48 DT denotes a
T7737 91-99 NN denotes mutation
T7738 49-55 NN denotes pGKneo
T7739 66-77 NN denotes replacement
T7740 56-65 NN denotes insertion
T7741 65-66 HYPH denotes /
T7742 78-90 VBG denotes inactivating
T7743 100-102 IN denotes in
T7744 103-106 DT denotes the
T7745 121-130 NN denotes homologue
T7746 107-112 NN denotes mouse
T7747 113-115 NN denotes HD
T7748 116-120 NN denotes gene
T7749 131-135 VBP denotes have
T7750 136-140 VBN denotes been
T7751 151-161 RB denotes previously
T7752 162-163 -LRB- denotes [
T7753 163-165 CD denotes 10
T7754 165-166 -RRB- denotes ]
T7755 166-167 . denotes .
T7756 167-294 sentence denotes The experiments were conducted in accordance with an IACUC approved protocol, through the MGH Subcommittee on Animal Research.
T7757 168-171 DT denotes The
T7758 172-183 NNS denotes experiments
T7759 189-198 VBN denotes conducted
T7760 184-188 VBD denotes were
T7761 199-201 IN denotes in
T7762 202-212 NN denotes accordance
T7763 213-217 IN denotes with
T7764 218-220 DT denotes an
T7765 236-244 NN denotes protocol
T7766 221-226 NNP denotes IACUC
T7767 227-235 VBN denotes approved
T7768 244-246 , denotes ,
T7769 246-253 IN denotes through
T7770 254-257 DT denotes the
T7771 262-274 NNP denotes Subcommittee
T7772 258-261 NNP denotes MGH
T7773 275-277 IN denotes on
T7774 278-284 NNP denotes Animal
T7775 285-293 NNP denotes Research
T7776 293-294 . denotes .
T7777 294-464 sentence denotes Mutant Hdhex4/5/Hdhex4/5 and normal littermates were obtained in timed pregnancies from mating of Hdhex4/5/Hdh+ heterozygotes, genotyped by PCR assay, as described [10].
T7778 295-301 NN denotes Mutant
T7779 302-308 NN denotes Hdhex4
T7780 331-342 NNS denotes littermates
T7781 308-309 HYPH denotes /
T7782 309-310 CD denotes 5
T7783 310-311 HYPH denotes /
T7784 311-317 NN denotes Hdhex4
T7785 317-318 HYPH denotes /
T7786 318-319 CD denotes 5
T7787 320-323 CC denotes and
T7788 324-330 JJ denotes normal
T7789 348-356 VBN denotes obtained
T7790 343-347 VBD denotes were
T7791 357-359 IN denotes in
T7792 360-365 VBN denotes timed
T7793 366-377 NNS denotes pregnancies
T7794 378-382 IN denotes from
T7795 383-389 NN denotes mating
T7796 390-392 IN denotes of
T7797 393-399 NN denotes Hdhex4
T7798 407-420 NNS denotes heterozygotes
T7799 399-400 HYPH denotes /
T7800 400-401 CD denotes 5
T7801 401-402 HYPH denotes /
T7802 402-405 NN denotes Hdh
T7803 405-406 SYM denotes +
T7804 420-422 , denotes ,
T7805 422-431 VBN denotes genotyped
T7806 432-434 IN denotes by
T7807 435-438 NN denotes PCR
T7808 439-444 NN denotes assay
T7809 444-446 , denotes ,
T7810 446-448 IN denotes as
T7811 449-458 VBN denotes described
T7812 459-460 -LRB- denotes [
T7813 460-462 CD denotes 10
T7814 462-463 -RRB- denotes ]
T7815 463-464 . denotes .
T7816 464-502 sentence denotes The day of plug was taken to be E0.5.
T7817 465-468 DT denotes The
T7818 469-472 NN denotes day
T7819 485-490 VBN denotes taken
T7820 473-475 IN denotes of
T7821 476-480 NN denotes plug
T7822 481-484 VBD denotes was
T7823 491-493 TO denotes to
T7824 494-496 VB denotes be
T7825 497-501 NN denotes E0.5
T7826 501-502 . denotes .
T7827 502-616 sentence denotes Embryos that were morphologically normal were pooled separately from morphologically mutant embryos for analysis.
T7828 503-510 NNS denotes Embryos
T7829 549-555 VBN denotes pooled
T7830 511-515 WDT denotes that
T7831 516-520 VBD denotes were
T7832 521-536 RB denotes morphologically
T7833 537-543 JJ denotes normal
T7834 544-548 VBD denotes were
T7835 556-566 RB denotes separately
T7836 567-571 IN denotes from
T7837 572-587 RB denotes morphologically
T7838 588-594 NN denotes mutant
T7839 595-602 NNS denotes embryos
T7840 603-606 IN denotes for
T7841 607-615 NN denotes analysis
T7842 615-616 . denotes .
T7843 616-771 sentence denotes Nodal expression was determined in embryos from matings of Hdhex4/5/Hdh+; NdllacZ/Ndl+ compound heterozygotes genotyped by PCR assay as described in [29].
T7844 617-622 NN denotes Nodal
T7845 623-633 NN denotes expression
T7846 638-648 VBN denotes determined
T7847 634-637 VBD denotes was
T7848 649-651 IN denotes in
T7849 652-659 NNS denotes embryos
T7850 660-664 IN denotes from
T7851 665-672 NNS denotes matings
T7852 673-675 IN denotes of
T7853 676-682 NN denotes Hdhex4
T7854 713-726 NNS denotes heterozygotes
T7855 682-683 HYPH denotes /
T7856 683-684 CD denotes 5
T7857 684-685 HYPH denotes /
T7858 685-688 NN denotes Hdh
T7859 688-689 SYM denotes +
T7860 689-690 , denotes ;
T7861 691-698 NN denotes NdllacZ
T7862 699-702 NN denotes Ndl
T7863 698-699 HYPH denotes /
T7864 702-703 SYM denotes +
T7865 704-712 NN denotes compound
T7866 727-736 VBN denotes genotyped
T7867 737-739 IN denotes by
T7868 740-743 NN denotes PCR
T7869 744-749 NN denotes assay
T7870 750-752 IN denotes as
T7871 753-762 VBN denotes described
T7872 763-765 IN denotes in
T7873 766-767 -LRB- denotes [
T7874 767-769 CD denotes 29
T7875 769-770 -RRB- denotes ]
T7876 770-771 . denotes .
R4667 T7726 T7725 cc and,Mice
R4668 T7727 T7725 conj genotyping,Mice
R4669 T7729 T7730 det The,mice
R4670 T7730 T7734 nsubjpass mice,described
R4671 T7731 T7730 nmod Hdhex4,mice
R4672 T7732 T7731 punct /,Hdhex4
R4673 T7733 T7731 nummod 5,Hdhex4
R4674 T7735 T7730 acl carrying,mice
R4675 T7736 T7737 det a,mutation
R4676 T7737 T7735 dobj mutation,carrying
R4677 T7738 T7739 compound pGKneo,replacement
R4678 T7739 T7742 npadvmod replacement,inactivating
R4679 T7740 T7739 compound insertion,replacement
R4680 T7741 T7739 punct /,replacement
R4681 T7742 T7737 amod inactivating,mutation
R4682 T7743 T7735 prep in,carrying
R4683 T7744 T7745 det the,homologue
R4684 T7745 T7743 pobj homologue,in
R4685 T7746 T7745 compound mouse,homologue
R4686 T7747 T7745 compound HD,homologue
R4687 T7748 T7745 compound gene,homologue
R4688 T7749 T7734 aux have,described
R4689 T7750 T7734 auxpass been,described
R4690 T7751 T7734 advmod previously,described
R4691 T7752 T7753 punct [,10
R4692 T7753 T7734 parataxis 10,described
R4693 T7754 T7753 punct ],10
R4694 T7755 T7734 punct .,described
R4695 T7757 T7758 det The,experiments
R4696 T7758 T7759 nsubjpass experiments,conducted
R4697 T7760 T7759 auxpass were,conducted
R4698 T7761 T7759 prep in,conducted
R4699 T7762 T7761 pobj accordance,in
R4700 T7763 T7762 prep with,accordance
R4701 T7764 T7765 det an,protocol
R4702 T7765 T7763 pobj protocol,with
R4703 T7766 T7767 npadvmod IACUC,approved
R4704 T7767 T7765 amod approved,protocol
R4705 T7768 T7759 punct ", ",conducted
R4706 T7769 T7759 prep through,conducted
R4707 T7770 T7771 det the,Subcommittee
R4708 T7771 T7769 pobj Subcommittee,through
R4709 T7772 T7771 compound MGH,Subcommittee
R4710 T7773 T7771 prep on,Subcommittee
R4711 T7774 T7775 compound Animal,Research
R4712 T7775 T7773 pobj Research,on
R4713 T7776 T7759 punct .,conducted
R4714 T7778 T7779 nmod Mutant,Hdhex4
R4715 T7779 T7780 nmod Hdhex4,littermates
R4716 T7780 T7789 nsubjpass littermates,obtained
R4717 T7781 T7779 punct /,Hdhex4
R4718 T7782 T7779 nummod 5,Hdhex4
R4719 T7783 T7779 punct /,Hdhex4
R4720 T7784 T7779 appos Hdhex4,Hdhex4
R4721 T7785 T7784 punct /,Hdhex4
R4722 T7786 T7784 nummod 5,Hdhex4
R4723 T7787 T7779 cc and,Hdhex4
R4724 T7788 T7779 conj normal,Hdhex4
R4725 T7790 T7789 auxpass were,obtained
R4726 T7791 T7789 prep in,obtained
R4727 T7792 T7793 amod timed,pregnancies
R4728 T7793 T7791 pobj pregnancies,in
R4729 T7794 T7789 prep from,obtained
R4730 T7795 T7794 pobj mating,from
R4731 T7796 T7795 prep of,mating
R4732 T7797 T7798 nmod Hdhex4,heterozygotes
R4733 T7798 T7796 pobj heterozygotes,of
R4734 T7799 T7797 punct /,Hdhex4
R4735 T7800 T7797 nummod 5,Hdhex4
R4736 T7801 T7797 punct /,Hdhex4
R4737 T7802 T7797 appos Hdh,Hdhex4
R4738 T7803 T7802 punct +,Hdh
R4739 T7804 T7798 punct ", ",heterozygotes
R4740 T7805 T7798 acl genotyped,heterozygotes
R4741 T7806 T7805 prep by,genotyped
R4742 T7807 T7808 compound PCR,assay
R4743 T7808 T7806 pobj assay,by
R4744 T7809 T7789 punct ", ",obtained
R4745 T7810 T7811 mark as,described
R4746 T7811 T7789 advcl described,obtained
R4747 T7812 T7813 punct [,10
R4748 T7813 T7811 parataxis 10,described
R4749 T7814 T7813 punct ],10
R4750 T7815 T7789 punct .,obtained
R4751 T7817 T7818 det The,day
R4752 T7818 T7819 nsubjpass day,taken
R4753 T7820 T7818 prep of,day
R4754 T7821 T7820 pobj plug,of
R4755 T7822 T7819 auxpass was,taken
R4756 T7823 T7824 aux to,be
R4757 T7824 T7819 xcomp be,taken
R4758 T7825 T7824 attr E0.5,be
R4759 T7826 T7819 punct .,taken
R4760 T7828 T7829 nsubjpass Embryos,pooled
R4761 T7830 T7831 dep that,were
R4762 T7831 T7828 relcl were,Embryos
R4763 T7832 T7833 advmod morphologically,normal
R4764 T7833 T7831 acomp normal,were
R4765 T7834 T7829 auxpass were,pooled
R4766 T7835 T7836 advmod separately,from
R4767 T7836 T7829 prep from,pooled
R4768 T7837 T7838 advmod morphologically,mutant
R4769 T7838 T7839 compound mutant,embryos
R4770 T7839 T7836 pobj embryos,from
R4771 T7840 T7829 prep for,pooled
R4772 T7841 T7840 pobj analysis,for
R4773 T7842 T7829 punct .,pooled
R4774 T7844 T7845 compound Nodal,expression
R4775 T7845 T7846 nsubjpass expression,determined
R4776 T7847 T7846 auxpass was,determined
R4777 T7848 T7846 prep in,determined
R4778 T7849 T7848 pobj embryos,in
R4779 T7850 T7849 prep from,embryos
R4780 T7851 T7850 pobj matings,from
R4781 T7852 T7851 prep of,matings
R4782 T7853 T7854 nmod Hdhex4,heterozygotes
R4783 T7854 T7852 pobj heterozygotes,of
R4784 T7855 T7853 punct /,Hdhex4
R4785 T7856 T7853 nummod 5,Hdhex4
R4786 T7857 T7853 punct /,Hdhex4
R4787 T7858 T7853 appos Hdh,Hdhex4
R4788 T7859 T7858 punct +,Hdh
R4789 T7860 T7853 punct ;,Hdhex4
R4790 T7861 T7862 compound NdllacZ,Ndl
R4791 T7862 T7853 appos Ndl,Hdhex4
R4792 T7863 T7862 punct /,Ndl
R4793 T7864 T7862 punct +,Ndl
R4794 T7865 T7854 compound compound,heterozygotes
R4795 T7866 T7854 acl genotyped,heterozygotes
R4796 T7867 T7866 prep by,genotyped
R4797 T7868 T7869 compound PCR,assay
R4798 T7869 T7867 pobj assay,by
R4799 T7870 T7871 mark as,described
R4800 T7871 T7866 advcl described,genotyped
R4801 T7872 T7871 prep in,described
R4802 T7873 T7874 punct [,29
R4803 T7874 T7872 pobj 29,in
R4804 T7875 T7874 punct ],29
R4805 T7876 T7846 punct .,determined

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T7693 0-4 NCBITaxon:10088 denotes Mice
T7694 24-27 PR_EXT:000008840 denotes Hdh
T7695 33-37 NCBITaxon:10088 denotes mice
T7696 56-65 SO_EXT:sequence_insertion_entity_or_process denotes insertion
T7697 66-77 SO_EXT:sequence_substitution_entity_or_process denotes replacement
T7698 91-99 SO_EXT:sequence_alteration_entity_or_process denotes mutation
T7699 107-112 NCBITaxon:10088 denotes mouse
T7700 113-115 PR_EXT:000008840 denotes HD
T7701 116-120 SO_EXT:0000704 denotes gene
T7702 121-130 SO_EXT:0000853 denotes homologue
T7703 278-284 NCBITaxon:33208 denotes Animal
T7704 295-301 SO_EXT:sequence_altered_entity_or_alteration_process denotes Mutant
T7705 302-305 PR_EXT:000008840 denotes Hdh
T7706 311-314 PR_EXT:000008840 denotes Hdh
T7707 366-377 GO:0007565 denotes pregnancies
T7708 383-389 GO:0007618 denotes mating
T7709 393-396 PR_EXT:000008840 denotes Hdh
T7710 402-405 PR_EXT:000008840 denotes Hdh
T7711 405-406 SO_EXT:normal_or_wild_type_or_present denotes +
T7712 476-480 UBERON:0010148 denotes plug
T7713 503-510 UBERON:0000922 denotes Embryos
T7714 588-594 SO_EXT:sequence_altered_entity_or_alteration_process denotes mutant
T7715 595-602 UBERON:0000922 denotes embryos
T7716 617-622 PR_EXT:000000105 denotes Nodal
T7717 623-633 GO:0010467 denotes expression
T7718 652-659 UBERON:0000922 denotes embryos
T7719 665-672 GO:0007618 denotes matings
T7720 676-679 PR_EXT:000008840 denotes Hdh
T7721 685-688 PR_EXT:000008840 denotes Hdh
T7722 688-689 SO_EXT:normal_or_wild_type_or_present denotes +
T7723 699-702 PR_EXT:000000105 denotes Ndl
T7724 702-703 SO_EXT:normal_or_wild_type_or_present denotes +

craft-ca-core-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T7669 0-4 NCBITaxon:10088 denotes Mice
T7670 24-27 PR:000008840 denotes Hdh
T7671 33-37 NCBITaxon:10088 denotes mice
T7672 107-112 NCBITaxon:10088 denotes mouse
T7673 113-115 PR:000008840 denotes HD
T7674 116-120 SO:0000704 denotes gene
T7675 121-130 SO:0000853 denotes homologue
T7676 278-284 NCBITaxon:33208 denotes Animal
T7677 302-305 PR:000008840 denotes Hdh
T7678 311-314 PR:000008840 denotes Hdh
T7679 366-377 GO:0007565 denotes pregnancies
T7680 383-389 GO:0007618 denotes mating
T7681 393-396 PR:000008840 denotes Hdh
T7682 402-405 PR:000008840 denotes Hdh
T7683 476-480 UBERON:0010148 denotes plug
T7684 503-510 UBERON:0000922 denotes Embryos
T7685 595-602 UBERON:0000922 denotes embryos
T7686 617-622 PR:000000105 denotes Nodal
T7687 623-633 GO:0010467 denotes expression
T7688 652-659 UBERON:0000922 denotes embryos
T7689 665-672 GO:0007618 denotes matings
T7690 676-679 PR:000008840 denotes Hdh
T7691 685-688 PR:000008840 denotes Hdh
T7692 699-702 PR:000000105 denotes Ndl