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PMC:1189074 / 6060-6300 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T1157 0-240 sentence denotes Southern blot analysis used an exon 10 probe (probe A), not present in the targeting vector, hybridized to a 13.2-kb band in addition to the 3.1-kb endogenous band indicating targeted insertion of the vector at the Acadm locus (Figure 1B).
T1158 1-9 NNP denotes Southern
T1159 10-14 NN denotes blot
T1160 15-23 NN denotes analysis
T1161 24-28 VBD denotes used
T1162 29-31 DT denotes an
T1163 40-45 NN denotes probe
T1164 32-36 NN denotes exon
T1165 37-39 CD denotes 10
T1166 46-47 -LRB- denotes (
T1167 53-54 NN denotes A
T1168 47-52 NN denotes probe
T1169 54-55 -RRB- denotes )
T1170 55-57 , denotes ,
T1171 57-60 RB denotes not
T1172 61-68 JJ denotes present
T1173 69-71 IN denotes in
T1174 72-75 DT denotes the
T1175 86-92 NN denotes vector
T1176 76-85 NN denotes targeting
T1177 92-94 , denotes ,
T1178 94-104 VBN denotes hybridized
T1179 105-107 IN denotes to
T1180 108-109 DT denotes a
T1181 118-122 NN denotes band
T1182 110-114 CD denotes 13.2
T1183 115-117 NN denotes kb
T1184 114-115 HYPH denotes -
T1185 123-125 IN denotes in
T1186 126-134 NN denotes addition
T1187 135-137 IN denotes to
T1188 138-141 DT denotes the
T1189 160-164 NN denotes band
T1190 142-145 CD denotes 3.1
T1191 146-148 NN denotes kb
T1192 145-146 HYPH denotes -
T1193 149-159 JJ denotes endogenous
T1194 165-175 VBG denotes indicating
T1195 176-184 VBN denotes targeted
T1196 185-194 NN denotes insertion
T1197 195-197 IN denotes of
T1198 198-201 DT denotes the
T1199 202-208 NN denotes vector
T1200 209-211 IN denotes at
T1201 212-215 DT denotes the
T1202 222-227 NN denotes locus
T1203 216-221 NN denotes Acadm
T1204 228-229 -LRB- denotes (
T1205 229-235 NN denotes Figure
T1206 236-238 CD denotes 1B
T1207 238-239 -RRB- denotes )
T1208 239-240 . denotes .
R775 T1177 T1163 punct ", ",probe
R776 T1178 T1163 acl hybridized,probe
R777 T1179 T1178 prep to,hybridized
R778 T1180 T1181 det a,band
R779 T1181 T1179 pobj band,to
R780 T1182 T1183 nummod 13.2,kb
R781 T1183 T1181 compound kb,band
R782 T1184 T1183 punct -,kb
R783 T1185 T1178 prep in,hybridized
R784 T1186 T1185 pobj addition,in
R785 T1187 T1186 prep to,addition
R786 T1188 T1189 det the,band
R787 T1189 T1187 pobj band,to
R788 T1190 T1191 nummod 3.1,kb
R789 T1191 T1189 nmod kb,band
R790 T1192 T1191 punct -,kb
R791 T1193 T1189 amod endogenous,band
R792 T1194 T1189 acl indicating,band
R793 T1195 T1196 amod targeted,insertion
R794 T1196 T1194 dobj insertion,indicating
R795 T1197 T1196 prep of,insertion
R796 T1198 T1199 det the,vector
R797 T1199 T1197 pobj vector,of
R798 T1200 T1196 prep at,insertion
R799 T1201 T1202 det the,locus
R800 T1202 T1200 pobj locus,at
R801 T1203 T1202 compound Acadm,locus
R802 T1204 T1205 punct (,Figure
R803 T1205 T1161 parataxis Figure,used
R804 T1206 T1205 nummod 1B,Figure
R805 T1207 T1205 punct ),Figure
R806 T1208 T1161 punct .,used
R757 T1158 T1159 compound Southern,blot
R758 T1159 T1160 compound blot,analysis
R759 T1160 T1161 nsubj analysis,used
R760 T1162 T1163 det an,probe
R761 T1163 T1161 dobj probe,used
R762 T1164 T1163 nmod exon,probe
R763 T1165 T1164 nummod 10,exon
R764 T1166 T1167 punct (,A
R765 T1167 T1163 parataxis A,probe
R766 T1168 T1167 compound probe,A
R767 T1169 T1167 punct ),A
R768 T1170 T1163 punct ", ",probe
R769 T1171 T1172 neg not,present
R770 T1172 T1163 relcl present,probe
R771 T1173 T1172 prep in,present
R772 T1174 T1175 det the,vector
R773 T1175 T1173 pobj vector,in
R774 T1176 T1175 compound targeting,vector

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T1461 32-36 SO:0000147 denotes exon
T1462 76-92 SO:0001644 denotes targeting vector
T1463 94-104 GO:0097617 denotes hybridized
T1464 202-208 SO:0000440 denotes vector

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T1523 32-36 SO_EXT:0000147 denotes exon
T1524 40-45 CHEBI_SO_EXT:molecular_probe denotes probe
T1525 47-52 CHEBI_SO_EXT:molecular_probe denotes probe
T1526 76-92 SO_EXT:0001644 denotes targeting vector
T1527 94-104 GO:0097617 denotes hybridized
T1528 116-117 CHEBI_SO_EXT:base denotes b
T1529 147-148 CHEBI_SO_EXT:base denotes b
T1530 185-194 SO_EXT:sequence_insertion_entity_or_process denotes insertion
T1531 202-208 SO_EXT:0000440 denotes vector
T1532 216-221 GO_PR_EXT:medium_chain_acyl_CoA_dehydrogenase denotes Acadm