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PMC:1189074 / 26492-27581 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T6907 1088-1089 . denotes .
T6906 1087-1088 -RRB- denotes ]
T6905 1084-1085 , denotes ,
T6904 1082-1084 CD denotes 31
T6903 1085-1087 CD denotes 32
T6902 1081-1082 -LRB- denotes [
T6901 1063-1067 NN denotes mass
T6900 1056-1062 JJ denotes tandem
T6899 1068-1080 NN denotes spectrometry
T6898 1043-1055 NN denotes electrospray
T6897 1037-1042 VBG denotes using
T6896 1022-1026 VBD denotes were
T6895 1017-1021 NN denotes bile
T6894 1013-1016 CC denotes and
T6893 1007-1012 NN denotes serum
T6892 1004-1006 IN denotes in
T6891 1027-1036 VBN denotes conducted
T6890 995-1003 NNS denotes analyses
T6889 981-994 NN denotes Acylcarnitine
T6888 980-1089 sentence denotes Acylcarnitine analyses in serum and bile were conducted using electrospray tandem mass spectrometry [31,32].
T6887 979-980 . denotes .
T6886 958-969 NN denotes calibration
T6885 970-979 NNS denotes standards
T6884 948-957 JJ denotes synthetic
T6883 943-947 IN denotes with
T6882 932-942 NN denotes comparison
T6881 929-931 IN denotes on
T6880 923-928 VBN denotes based
T6879 913-917 VBD denotes were
T6878 918-922 VBN denotes made
T6877 898-912 NNS denotes determinations
T6876 885-897 JJ denotes quantitative
T6875 881-884 CC denotes and
T6874 879-881 , denotes ,
T6873 862-870 JJ denotes internal
T6872 871-879 NN denotes standard
T6871 858-861 DT denotes the
T6870 855-857 IN denotes as
T6869 846-849 VBD denotes was
T6868 844-845 -RRB- denotes )
T6867 838-844 NNP denotes States
T6866 831-837 NNP denotes United
T6865 829-831 , denotes ,
T6864 821-829 NNP denotes Missouri
T6863 819-821 , denotes ,
T6862 814-819 NNP denotes Louis
T6861 810-813 NNP denotes St.
T6860 808-810 , denotes ,
T6859 801-802 : denotes ;
T6858 798-801 NN denotes C24
T6857 803-808 NNP denotes Sigma
T6856 797-798 -LRB- denotes (
T6855 850-854 VBN denotes used
T6854 785-796 NN denotes tetracosane
T6853 778-784 IN denotes except
T6852 776-778 , denotes ,
T6851 775-776 -RRB- denotes ]
T6850 772-773 , denotes ,
T6849 770-772 CD denotes 22
T6848 773-775 CD denotes 30
T6847 769-770 -LRB- denotes [
T6846 748-758 RB denotes previously
T6845 759-768 VBN denotes described
T6844 745-747 IN denotes as
T6843 732-744 NN denotes spectroscopy
T6842 727-731 NN denotes mass
T6841 726-727 HYPH denotes -
T6840 712-726 NN denotes chromatography
T6813 578-580 NN denotes μl
T6812 574-575 -LRB- denotes (
T6811 562-568 NN denotes sample
T6810 554-561 VBN denotes reduced
T6809 569-573 NN denotes size
T6808 552-553 DT denotes a
T6807 540-551 VB denotes accommodate
T6806 537-539 TO denotes to
T6805 524-527 VBD denotes was
T6804 528-536 VBN denotes modified
T6803 518-523 NN denotes assay
T6802 514-517 DT denotes The
T6801 513-658 sentence denotes The assay was modified to accommodate a reduced sample size (10 μl) and use of a microplate reader for measurement of optical density at 550 nm.
T6800 512-513 . denotes .
T6799 511-512 -RRB- denotes )
T6798 505-511 NNP denotes States
T6797 498-504 NNP denotes United
T6796 496-498 , denotes ,
T6795 488-496 NNP denotes Virginia
T6794 486-488 , denotes ,
T6793 478-486 NNP denotes Richmond
T6792 476-478 , denotes ,
T6791 460-464 NNP denotes Wako
T6790 458-460 , denotes ,
T6789 448-449 '' denotes ”
T6788 450-458 NNS denotes reagents
T6787 446-447 HYPH denotes -
T6786 447-448 NN denotes C
T6785 442-446 NN denotes NEFA
T6784 441-442 `` denotes “
T6783 465-476 NNP denotes Diagnostics
T6782 440-441 -LRB- denotes (
T6781 420-432 JJ denotes colorimetric
T6780 418-420 , denotes ,
T6779 409-418 JJ denotes enzymatic
T6778 433-439 NN denotes method
T6777 406-408 DT denotes an
T6776 403-405 IN denotes by
T6775 389-393 VBD denotes were
T6774 387-388 -RRB- denotes )
T6773 383-387 NN denotes NEFA
T6772 382-383 -LRB- denotes (
T6771 394-402 VBN denotes measured
T6770 370-375 JJ denotes fatty
T6769 355-369 JJ denotes non-esterified
T6768 376-381 NNS denotes acids
T6767 349-354 JJ denotes Total
T6766 348-513 sentence denotes Total non-esterified fatty acids (NEFA) were measured by an enzymatic, colorimetric method (“NEFA-C” reagents, Wako Diagnostics, Richmond, Virginia, United States).
T6765 347-348 . denotes .
T6764 346-347 -RRB- denotes )
T6763 340-346 NNP denotes States
T6762 333-339 NNP denotes United
T6761 331-333 , denotes ,
T6760 327-331 NNP denotes York
T6759 323-326 NNP denotes New
T6758 321-323 , denotes ,
T6757 312-321 NNP denotes Rochester
T6756 310-312 , denotes ,
T6755 290-298 NNP denotes Clinical
T6754 282-289 NNP denotes Johnson
T6753 278-281 CC denotes and
T6752 270-277 NNP denotes Johnson
T6751 299-310 NNP denotes Diagnostics
T6750 269-270 -LRB- denotes (
T6749 259-261 CD denotes II
T6748 256-258 NN denotes DT
T6747 247-255 NN denotes Ektachem
T6746 262-268 NN denotes system
T6745 244-246 DT denotes an
T6744 238-243 VBG denotes using
T6743 233-237 NNS denotes sera
T6742 230-232 NN denotes μl
T6741 227-229 CD denotes 10
T6740 224-226 IN denotes in
T6739 211-214 VBD denotes was
T6738 215-223 VBN denotes measured
T6737 197-210 NN denotes concentration
T6736 189-196 NN denotes Glucose
T6735 188-348 sentence denotes Glucose concentration was measured in 10 μl sera using an Ektachem DT II system (Johnson and Johnson Clinical Diagnostics, Rochester, New York, United States).
T6734 187-188 . denotes .
T6733 179-187 NN denotes analysis
T6732 176-178 IN denotes to
T6731 170-175 JJ denotes prior
T6730 168-169 -RRB- denotes )
T6729 147-156 NN denotes carnitine
T6728 143-146 CC denotes and
T6727 141-143 , denotes ,
T6726 137-141 NN denotes acid
T6725 129-136 JJ denotes organic
T6724 127-129 , denotes ,
T6723 117-122 JJ denotes fatty
T6722 123-127 NN denotes acid
T6721 112-116 JJ denotes free
T6720 110-112 , denotes ,
T6719 103-110 NN denotes glucose
T6718 97-102 NN denotes serum
T6717 157-168 NNS denotes experiments
T6716 96-97 -LRB- denotes (
T6715 94-95 NN denotes h
T6714 91-93 CD denotes 24
T6713 88-90 CC denotes or
T6712 86-87 -RRB- denotes )
T6711 65-74 NN denotes tolerance
T6710 60-64 NN denotes cold
T6709 75-86 NNS denotes experiments
T6708 59-60 -LRB- denotes (
T6707 57-58 NN denotes h
T6706 54-56 CD denotes 18
T6705 50-53 IN denotes for
T6704 38-42 VBD denotes were
T6703 43-49 VBN denotes fasted
T6702 31-32 SYM denotes −
T6701 30-31 HYPH denotes /
T6700 29-30 SYM denotes −
T6699 25-29 NN denotes MCAD
T6698 21-24 CC denotes and
T6697 19-20 SYM denotes +
T6696 18-19 HYPH denotes /
T6695 17-18 SYM denotes +
T6694 13-17 NN denotes MCAD
T6693 33-37 NNS denotes mice
T6692 8-9 HYPH denotes -
T6691 9-12 JJ denotes old
T6690 5-6 HYPH denotes -
T6689 6-8 NN denotes wk
T6688 0-5 CD denotes Eight
T6836 692-701 VBN denotes performed
T6839 708-711 NN denotes gas
T6838 702-707 VBG denotes using
T6837 687-691 VBD denotes were
T6835 678-686 NNS denotes analyses
T6834 665-672 JJ denotes organic
T6833 673-677 NN denotes acid
T6832 659-664 NN denotes Urine
T6831 658-980 sentence denotes Urine organic acid analyses were performed using gas chromatography-mass spectroscopy as previously described [22,30], except tetracosane (C24; Sigma, St. Louis, Missouri, United States) was used as the internal standard, and quantitative determinations were made based on comparison with synthetic calibration standards.
T6830 657-658 . denotes .
T6829 655-657 NN denotes nm
T6828 651-654 CD denotes 550
T6827 648-650 IN denotes at
T6826 640-647 NN denotes density
T6825 632-639 JJ denotes optical
T6824 629-631 IN denotes of
T6823 617-628 NN denotes measurement
T6822 613-616 IN denotes for
T6821 595-605 NN denotes microplate
T6820 606-612 NN denotes reader
T6819 593-594 DT denotes a
T6818 590-592 IN denotes of
T6817 586-589 NN denotes use
T6816 582-585 CC denotes and
T6815 580-581 -RRB- denotes )
T6814 575-577 CD denotes 10
R4277 T6688 T6689 nummod Eight,wk
R4278 T6689 T6691 npadvmod wk,old
R4279 T6690 T6689 punct -,wk
R4280 T6691 T6693 amod old,mice
R4281 T6692 T6691 punct -,old
R4282 T6693 T6703 nsubjpass mice,fasted
R4283 T6694 T6693 nmod MCAD,mice
R4284 T6695 T6694 punct +,MCAD
R4285 T6696 T6694 punct /,MCAD
R4286 T6697 T6694 punct +,MCAD
R4287 T6698 T6694 cc and,MCAD
R4288 T6699 T6694 conj MCAD,MCAD
R4289 T6700 T6699 punct −,MCAD
R4290 T6701 T6699 punct /,MCAD
R4291 T6702 T6699 punct −,MCAD
R4292 T6704 T6703 auxpass were,fasted
R4293 T6705 T6703 prep for,fasted
R4294 T6706 T6707 nummod 18,h
R4295 T6707 T6705 pobj h,for
R4296 T6708 T6709 punct (,experiments
R4297 T6709 T6707 parataxis experiments,h
R4298 T6710 T6711 compound cold,tolerance
R4299 T6711 T6709 compound tolerance,experiments
R4300 T6712 T6709 punct ),experiments
R4301 T6713 T6707 cc or,h
R4302 T6714 T6715 nummod 24,h
R4303 T6715 T6707 conj h,h
R4304 T6716 T6717 punct (,experiments
R4305 T6717 T6715 parataxis experiments,h
R4306 T6718 T6719 nmod serum,glucose
R4307 T6719 T6717 nmod glucose,experiments
R4308 T6720 T6719 punct ", ",glucose
R4309 T6721 T6722 amod free,acid
R4310 T6722 T6719 conj acid,glucose
R4311 T6723 T6722 amod fatty,acid
R4312 T6724 T6722 punct ", ",acid
R4313 T6725 T6726 amod organic,acid
R4314 T6726 T6722 conj acid,acid
R4315 T6727 T6726 punct ", ",acid
R4316 T6728 T6726 cc and,acid
R4317 T6729 T6726 conj carnitine,acid
R4318 T6730 T6717 punct ),experiments
R4319 T6731 T6732 amod prior,to
R4320 T6732 T6703 prep to,fasted
R4321 T6733 T6732 pobj analysis,to
R4322 T6734 T6703 punct .,fasted
R4323 T6736 T6737 compound Glucose,concentration
R4324 T6737 T6738 nsubjpass concentration,measured
R4325 T6739 T6738 auxpass was,measured
R4326 T6740 T6738 prep in,measured
R4327 T6741 T6742 nummod 10,μl
R4328 T6742 T6743 compound μl,sera
R4329 T6743 T6740 pobj sera,in
R4330 T6744 T6738 advcl using,measured
R4331 T6745 T6746 det an,system
R4332 T6746 T6744 dobj system,using
R4333 T6747 T6748 nmod Ektachem,DT
R4334 T6748 T6746 nmod DT,system
R4335 T6749 T6748 nummod II,DT
R4336 T6750 T6751 punct (,Diagnostics
R4337 T6751 T6746 parataxis Diagnostics,system
R4338 T6752 T6751 nmod Johnson,Diagnostics
R4339 T6753 T6752 cc and,Johnson
R4340 T6754 T6752 conj Johnson,Johnson
R4341 T6755 T6751 compound Clinical,Diagnostics
R4342 T6756 T6751 punct ", ",Diagnostics
R4343 T6757 T6751 npadvmod Rochester,Diagnostics
R4344 T6758 T6751 punct ", ",Diagnostics
R4345 T6759 T6760 compound New,York
R4346 T6760 T6751 npadvmod York,Diagnostics
R4347 T6761 T6751 punct ", ",Diagnostics
R4348 T6762 T6763 compound United,States
R4349 T6763 T6751 npadvmod States,Diagnostics
R4350 T6764 T6751 punct ),Diagnostics
R4351 T6765 T6738 punct .,measured
R4352 T6767 T6768 amod Total,acids
R4353 T6768 T6771 nsubjpass acids,measured
R4354 T6769 T6768 amod non-esterified,acids
R4355 T6770 T6768 amod fatty,acids
R4356 T6772 T6768 punct (,acids
R4357 T6773 T6768 appos NEFA,acids
R4358 T6774 T6771 punct ),measured
R4359 T6775 T6771 auxpass were,measured
R4360 T6776 T6771 prep by,measured
R4361 T6777 T6778 det an,method
R4362 T6778 T6776 pobj method,by
R4363 T6779 T6778 amod enzymatic,method
R4364 T6780 T6778 punct ", ",method
R4365 T6781 T6778 amod colorimetric,method
R4366 T6782 T6783 punct (,Diagnostics
R4367 T6783 T6771 parataxis Diagnostics,measured
R4368 T6784 T6783 punct “,Diagnostics
R4369 T6785 T6786 nmod NEFA,C
R4370 T6786 T6788 nmod C,reagents
R4371 T6787 T6786 punct -,C
R4372 T6788 T6783 dep reagents,Diagnostics
R4373 T6789 T6788 punct ”,reagents
R4374 T6790 T6783 punct ", ",Diagnostics
R4375 T6791 T6783 compound Wako,Diagnostics
R4376 T6792 T6783 punct ", ",Diagnostics
R4377 T6793 T6783 npadvmod Richmond,Diagnostics
R4378 T6794 T6783 punct ", ",Diagnostics
R4379 T6795 T6783 npadvmod Virginia,Diagnostics
R4380 T6796 T6783 punct ", ",Diagnostics
R4381 T6797 T6798 compound United,States
R4382 T6798 T6783 npadvmod States,Diagnostics
R4383 T6799 T6783 punct ),Diagnostics
R4384 T6800 T6771 punct .,measured
R4385 T6802 T6803 det The,assay
R4386 T6803 T6804 nsubjpass assay,modified
R4387 T6805 T6804 auxpass was,modified
R4388 T6806 T6807 aux to,accommodate
R4389 T6807 T6804 advcl accommodate,modified
R4390 T6808 T6809 det a,size
R4391 T6809 T6807 dobj size,accommodate
R4392 T6810 T6809 amod reduced,size
R4393 T6811 T6809 compound sample,size
R4394 T6812 T6813 punct (,μl
R4395 T6813 T6809 parataxis μl,size
R4396 T6814 T6813 nummod 10,μl
R4397 T6815 T6813 punct ),μl
R4398 T6816 T6809 cc and,size
R4399 T6817 T6809 conj use,size
R4400 T6818 T6817 prep of,use
R4401 T6819 T6820 det a,reader
R4402 T6820 T6818 pobj reader,of
R4403 T6821 T6820 compound microplate,reader
R4404 T6822 T6820 prep for,reader
R4405 T6823 T6822 pobj measurement,for
R4406 T6824 T6823 prep of,measurement
R4407 T6825 T6826 amod optical,density
R4408 T6826 T6824 pobj density,of
R4409 T6827 T6826 prep at,density
R4410 T6828 T6829 nummod 550,nm
R4411 T6829 T6827 pobj nm,at
R4412 T6830 T6804 punct .,modified
R4413 T6832 T6833 nmod Urine,acid
R4414 T6833 T6835 compound acid,analyses
R4415 T6834 T6833 amod organic,acid
R4416 T6835 T6836 nsubjpass analyses,performed
R4417 T6837 T6836 auxpass were,performed
R4418 T6838 T6836 advcl using,performed
R4419 T6839 T6840 compound gas,chromatography
R4420 T6840 T6838 dobj chromatography,using
R4421 T6841 T6840 punct -,chromatography
R4422 T6842 T6843 compound mass,spectroscopy
R4423 T6843 T6840 appos spectroscopy,chromatography
R4424 T6844 T6845 mark as,described
R4425 T6845 T6838 advcl described,using
R4426 T6846 T6845 advmod previously,described
R4427 T6847 T6848 punct [,30
R4428 T6848 T6836 parataxis 30,performed
R4429 T6849 T6848 nummod 22,30
R4430 T6850 T6848 punct ",",30
R4431 T6851 T6848 punct ],30
R4432 T6852 T6836 punct ", ",performed
R4433 T6853 T6836 prep except,performed
R4434 T6854 T6855 nsubjpass tetracosane,used
R4435 T6855 T6853 pcomp used,except
R4436 T6856 T6857 punct (,Sigma
R4437 T6857 T6854 parataxis Sigma,tetracosane
R4438 T6858 T6857 dep C24,Sigma
R4439 T6859 T6857 punct ;,Sigma
R4440 T6860 T6857 punct ", ",Sigma
R4441 T6861 T6862 compound St.,Louis
R4442 T6862 T6857 npadvmod Louis,Sigma
R4443 T6863 T6857 punct ", ",Sigma
R4444 T6864 T6857 npadvmod Missouri,Sigma
R4445 T6865 T6857 punct ", ",Sigma
R4446 T6866 T6867 compound United,States
R4447 T6867 T6857 npadvmod States,Sigma
R4448 T6868 T6857 punct ),Sigma
R4449 T6869 T6855 auxpass was,used
R4450 T6870 T6855 prep as,used
R4451 T6871 T6872 det the,standard
R4452 T6872 T6870 pobj standard,as
R4453 T6873 T6872 amod internal,standard
R4454 T6874 T6836 punct ", ",performed
R4455 T6875 T6836 cc and,performed
R4456 T6876 T6877 amod quantitative,determinations
R4457 T6877 T6878 nsubjpass determinations,made
R4458 T6878 T6836 conj made,performed
R4459 T6879 T6878 auxpass were,made
R4460 T6880 T6878 prep based,made
R4461 T6881 T6880 prep on,based
R4462 T6882 T6881 pobj comparison,on
R4463 T6883 T6882 prep with,comparison
R4464 T6884 T6885 amod synthetic,standards
R4465 T6885 T6883 pobj standards,with
R4466 T6886 T6885 compound calibration,standards
R4467 T6887 T6878 punct .,made
R4468 T6889 T6890 compound Acylcarnitine,analyses
R4469 T6890 T6891 nsubjpass analyses,conducted
R4470 T6892 T6890 prep in,analyses
R4471 T6893 T6892 pobj serum,in
R4472 T6894 T6893 cc and,serum
R4473 T6895 T6893 conj bile,serum
R4474 T6896 T6891 auxpass were,conducted
R4475 T6897 T6891 advcl using,conducted
R4476 T6898 T6899 nmod electrospray,spectrometry
R4477 T6899 T6897 dobj spectrometry,using
R4478 T6900 T6899 amod tandem,spectrometry
R4479 T6901 T6899 compound mass,spectrometry
R4480 T6902 T6903 punct [,32
R4481 T6903 T6891 parataxis 32,conducted
R4482 T6904 T6903 nummod 31,32
R4483 T6905 T6903 punct ",",32
R4484 T6906 T6903 punct ],32
R4485 T6907 T6891 punct .,conducted

craft-ca-core-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T6923 1017-1021 UBERON:0001970 denotes bile
T6922 1007-1012 UBERON:0001977 denotes serum
T6921 981-994 CHEBI:17387 denotes Acylcarnitine
T6920 785-796 CHEBI:32936 denotes tetracosane
T6919 665-677 CHEBI:64709 denotes organic acid
T6918 659-664 UBERON:0001088 denotes Urine
T6917 450-458 CHEBI:33893 denotes reagents
T6916 370-381 CHEBI:35366 denotes fatty acids
T6915 233-237 UBERON:0001977 denotes sera
T6914 189-196 CHEBI:17234 denotes Glucose
T6913 147-156 CHEBI:17126 denotes carnitine
T6912 129-141 CHEBI:64709 denotes organic acid
T6911 117-127 CHEBI:35366 denotes fatty acid
T6910 103-110 CHEBI:17234 denotes glucose
T6909 97-102 UBERON:0001977 denotes serum
T6908 33-37 NCBITaxon:10088 denotes mice

2_test

Id Subject Object Predicate Lexical cue
16121256-2919115-86078350 770-772 2919115 denotes 22
16121256-3367620-86078351 773-775 3367620 denotes 30
16121256-7494654-86078352 1082-1084 7494654 denotes 31
T84916 770-772 2919115 denotes 22
T17032 773-775 3367620 denotes 30
T91334 1082-1084 7494654 denotes 31

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T6946 1017-1021 UBERON:0001970 denotes bile
T6945 1007-1012 UBERON:0001977 denotes serum
T6944 981-994 CHEBI:17387 denotes Acylcarnitine
T6943 785-796 CHEBI:32936 denotes tetracosane
T6942 665-677 CHEBI:64709 denotes organic acid
T6941 659-664 UBERON:0001088 denotes Urine
T6940 450-458 CHEBI_EXT:33893 denotes reagents
T6939 409-418 CHEBI_GO_SO_EXT:enzyme denotes enzymatic
T6938 370-381 CHEBI:35366 denotes fatty acids
T6937 233-237 UBERON:0001977 denotes sera
T6936 189-196 CHEBI:17234 denotes Glucose
T6935 147-156 CHEBI:17126 denotes carnitine
T6934 129-141 CHEBI:64709 denotes organic acid
T6933 117-127 CHEBI:35366 denotes fatty acid
T6932 103-110 CHEBI:17234 denotes glucose
T6931 97-102 UBERON:0001977 denotes serum
T6930 33-37 NCBITaxon:10088 denotes mice
T6929 31-32 SO_EXT:sequence_nullness_or_absence denotes −
T6928 29-30 SO_EXT:sequence_nullness_or_absence denotes −
T6927 25-29 GO_PR_EXT:medium_chain_acyl_CoA_dehydrogenase denotes MCAD
T6926 19-20 SO_EXT:normal_or_wild_type_or_present denotes +
T6925 17-18 SO_EXT:normal_or_wild_type_or_present denotes +
T6924 13-17 GO_PR_EXT:medium_chain_acyl_CoA_dehydrogenase denotes MCAD