PMC:1189074 / 2428-2650
Annnotations
craft-sa-dev
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T423 | 0-222 | sentence | denotes | Medium-chain acyl-CoA dehydrogenase (MCAD) (the mouse gene is Acadm, whereas the protein is MCAD), specifically, is responsible for catalyzing the dehydrogenation of medium-chain length (C6–C12) fatty acid thioesters [1]. |
| T424 | 1-7 | JJ | denotes | Medium |
| T425 | 8-13 | NN | denotes | chain |
| T426 | 7-8 | HYPH | denotes | - |
| T427 | 23-36 | NN | denotes | dehydrogenase |
| T428 | 14-18 | NN | denotes | acyl |
| T429 | 19-22 | NN | denotes | CoA |
| T430 | 18-19 | HYPH | denotes | - |
| T431 | 114-116 | VBZ | denotes | is |
| T432 | 37-38 | -LRB- | denotes | ( |
| T433 | 38-42 | NN | denotes | MCAD |
| T434 | 42-43 | -RRB- | denotes | ) |
| T435 | 44-45 | -LRB- | denotes | ( |
| T436 | 60-62 | VBZ | denotes | is |
| T437 | 45-48 | DT | denotes | the |
| T438 | 55-59 | NN | denotes | gene |
| T439 | 49-54 | NN | denotes | mouse |
| T440 | 63-68 | NN | denotes | Acadm |
| T441 | 68-70 | , | denotes | , |
| T442 | 70-77 | IN | denotes | whereas |
| T443 | 90-92 | VBZ | denotes | is |
| T444 | 78-81 | DT | denotes | the |
| T445 | 82-89 | NN | denotes | protein |
| T446 | 93-97 | NN | denotes | MCAD |
| T447 | 97-98 | -RRB- | denotes | ) |
| T448 | 98-100 | , | denotes | , |
| T449 | 100-112 | RB | denotes | specifically |
| T450 | 112-114 | , | denotes | , |
| T451 | 117-128 | JJ | denotes | responsible |
| T452 | 129-132 | IN | denotes | for |
| T453 | 133-143 | VBG | denotes | catalyzing |
| T454 | 144-147 | DT | denotes | the |
| T455 | 148-163 | NN | denotes | dehydrogenation |
| T456 | 164-166 | IN | denotes | of |
| T457 | 167-173 | JJ | denotes | medium |
| T458 | 174-179 | NN | denotes | chain |
| T459 | 173-174 | HYPH | denotes | - |
| T460 | 180-186 | NN | denotes | length |
| T461 | 207-217 | NNS | denotes | thioesters |
| T462 | 187-188 | -LRB- | denotes | ( |
| T463 | 191-194 | NN | denotes | C12 |
| T464 | 188-190 | NN | denotes | C6 |
| T465 | 190-191 | SYM | denotes | – |
| T466 | 194-195 | -RRB- | denotes | ) |
| T467 | 196-201 | JJ | denotes | fatty |
| T468 | 202-206 | NN | denotes | acid |
| T469 | 218-219 | -LRB- | denotes | [ |
| T470 | 219-220 | CD | denotes | 1 |
| T471 | 220-221 | -RRB- | denotes | ] |
| T472 | 221-222 | . | denotes | . |
| R226 | T424 | T425 | amod | Medium,chain |
| R227 | T425 | T427 | compound | chain,dehydrogenase |
| R228 | T426 | T425 | punct | -,chain |
| R229 | T427 | T431 | nsubj | dehydrogenase,is |
| R230 | T428 | T429 | compound | acyl,CoA |
| R231 | T429 | T427 | compound | CoA,dehydrogenase |
| R232 | T430 | T429 | punct | -,CoA |
| R233 | T432 | T427 | punct | (,dehydrogenase |
| R234 | T433 | T427 | appos | MCAD,dehydrogenase |
| R235 | T434 | T427 | punct | ),dehydrogenase |
| R236 | T435 | T436 | punct | (,is |
| R237 | T436 | T427 | parataxis | is,dehydrogenase |
| R238 | T437 | T438 | det | the,gene |
| R239 | T438 | T436 | nsubj | gene,is |
| R240 | T439 | T438 | compound | mouse,gene |
| R241 | T440 | T436 | attr | Acadm,is |
| R242 | T441 | T436 | punct | ", ",is |
| R243 | T442 | T443 | mark | whereas,is |
| R244 | T443 | T436 | advcl | is,is |
| R245 | T444 | T445 | det | the,protein |
| R246 | T445 | T443 | nsubj | protein,is |
| R247 | T446 | T443 | attr | MCAD,is |
| R248 | T447 | T436 | punct | ),is |
| R249 | T448 | T431 | punct | ", ",is |
| R250 | T449 | T431 | advmod | specifically,is |
| R251 | T450 | T431 | punct | ", ",is |
| R252 | T451 | T431 | acomp | responsible,is |
| R253 | T452 | T451 | prep | for,responsible |
| R254 | T453 | T452 | pcomp | catalyzing,for |
| R255 | T454 | T455 | det | the,dehydrogenation |
| R256 | T455 | T453 | dobj | dehydrogenation,catalyzing |
| R257 | T456 | T455 | prep | of,dehydrogenation |
| R258 | T457 | T458 | amod | medium,chain |
| R259 | T458 | T460 | nmod | chain,length |
| R260 | T459 | T458 | punct | -,chain |
| R261 | T460 | T461 | nmod | length,thioesters |
| R262 | T461 | T456 | pobj | thioesters,of |
| R263 | T462 | T463 | punct | (,C12 |
| R264 | T463 | T460 | parataxis | C12,length |
| R265 | T464 | T463 | nmod | C6,C12 |
| R266 | T465 | T463 | punct | –,C12 |
| R267 | T466 | T463 | punct | ),C12 |
| R268 | T467 | T468 | amod | fatty,acid |
| R269 | T468 | T461 | compound | acid,thioesters |
| R270 | T469 | T470 | punct | [,1 |
| R271 | T470 | T431 | parataxis | 1,is |
| R272 | T471 | T470 | punct | ],1 |
| R273 | T472 | T431 | punct | .,is |
craft-ca-core-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T809 | 1-22 | CHEBI:61907 | denotes | Medium-chain acyl-CoA |
| T810 | 49-54 | NCBITaxon:10088 | denotes | mouse |
| T811 | 55-59 | SO:0000704 | denotes | gene |
| T812 | 148-163 | MOP:0000590 | denotes | dehydrogenation |
| T813 | 167-186 | _FRAGMENT | denotes | medium-chain length |
| T814 | 196-206 | CHEBI:59554 | denotes | fatty acid |
| T815 | 207-217 | CHEBI:51277 | denotes | thioesters |
| R573 | T814 | T813 | _lexicallyChainedTo | fatty acid,medium-chain length |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 16121256-11826276-86078317 | 219-220 | 11826276 | denotes | 1 |
| T84459 | 219-220 | 11826276 | denotes | 1 |
craft-ca-core-ex-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T851 | 1-22 | CHEBI:61907 | denotes | Medium-chain acyl-CoA |
| T852 | 1-36 | GO_PR_EXT:medium_chain_acyl_CoA_dehydrogenase | denotes | Medium-chain acyl-CoA dehydrogenase |
| T853 | 38-42 | GO_PR_EXT:medium_chain_acyl_CoA_dehydrogenase | denotes | MCAD |
| T854 | 49-54 | NCBITaxon:10088 | denotes | mouse |
| T855 | 55-59 | SO_EXT:0000704 | denotes | gene |
| T856 | 63-68 | GO_PR_EXT:medium_chain_acyl_CoA_dehydrogenase | denotes | Acadm |
| T857 | 82-89 | CHEBI_PR_EXT:protein | denotes | protein |
| T858 | 93-97 | GO_PR_EXT:medium_chain_acyl_CoA_dehydrogenase | denotes | MCAD |
| T859 | 133-143 | GO_MOP_EXT:catalysis | denotes | catalyzing |
| T860 | 148-163 | MOP:0000590 | denotes | dehydrogenation |
| T861 | 167-186 | _FRAGMENT | denotes | medium-chain length |
| T862 | 196-206 | CHEBI:59554 | denotes | fatty acid |
| T863 | 196-201 | CHEBI_UBERON_EXT:triglyceride_or_adipose_tissue | denotes | fatty |
| T864 | 207-217 | CHEBI:51277 | denotes | thioesters |
| R576 | T862 | T861 | _lexicallyChainedTo | fatty acid,medium-chain length |