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PMC:1189073 / 7127-7467 JSONTXT

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craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T8418 131-144 SO_EXT:coding_sequence denotes coding region
T8435 22-26 NCBITaxon:10088 denotes mice
T8436 47-52 SO_EXT:0000704 denotes genic
T8437 54-63 GO:0030849 denotes autosomal
T8438 89-93 PR_EXT:000004182 denotes Aqp2
T8439 106-110 SO_EXT:0000704 denotes gene
T8440 126-130 PR_EXT:000004182 denotes Aqp2
T8441 157-161 NCBITaxon:10088 denotes mice
T8442 175-182 CHEBI_EXT:thymine_nucleobase_or_nucleoside_or_nucleotide_molecular_entity_or_group denotes thymine
T8443 175-193 _FRAGMENT denotes thymine to guanine
T8444 203-215 SO_EXT:1000022 denotes transversion
T8445 186-193 CHEBI_EXT:guanine_nucleobase_or_nucleoside_or_nucleotide_molecular_entity_or_group denotes guanine
T8446 195-196 CHEBI_EXT:thymine_nucleobase_or_nucleoside_or_nucleotide_molecular_entity_or_group denotes T
T8447 195-201 _FRAGMENT denotes T to G
T8448 200-201 CHEBI_EXT:guanine_nucleobase_or_nucleoside_or_nucleotide_molecular_entity_or_group denotes G
T8449 261-267 CHEBI_SO_EXT:valine denotes valine
T8450 272-285 CHEBI_SO_EXT:phenylalanine denotes phenylalanine
T8451 286-298 SO_EXT:sequence_substitution_entity_or_process denotes substitution
T8452 302-312 CHEBI_SO_EXT:amino_acid denotes amino acid
T8453 324-331 CHEBI_PR_EXT:protein denotes protein
R912 T8444 T8443 _lexicallyChainedTo transversion,thymine to guanine
R913 T8444 T8447 _lexicallyChainedTo transversion,T to G

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T8106 22-26 NCBITaxon:10088 denotes mice
T8107 47-52 SO:0000704 denotes genic
T8108 54-63 GO:0030849 denotes autosomal
T8109 89-93 PR:000004182 denotes Aqp2
T8110 106-110 SO:0000704 denotes gene
T8111 126-130 PR:000004182 denotes Aqp2
T8112 157-161 NCBITaxon:10088 denotes mice
T8113 175-193 _FRAGMENT denotes thymine to guanine
T8114 203-215 SO:1000022 denotes transversion
T8115 195-201 _FRAGMENT denotes T to G
R907 T8114 T8113 _lexicallyChainedTo transversion,thymine to guanine
R908 T8114 T8115 _lexicallyChainedTo transversion,T to G

craft-sa-dev

Id Subject Object Predicate Lexical cue
T9034 0-3 DT denotes The
T9035 4-12 NN denotes disorder
T9036 27-37 VBD denotes segregated
T9037 13-15 IN denotes in
T9038 16-21 DT denotes these
T9039 22-26 NNS denotes mice
T9040 38-40 IN denotes in
T9041 41-42 DT denotes a
T9042 74-80 NN denotes manner
T9043 43-52 JJ denotes monogenic
T9044 52-54 , denotes ,
T9045 54-63 JJ denotes autosomal
T9046 64-73 JJ denotes recessive
T9047 80-82 , denotes ,
T9048 82-88 VBG denotes making
T9049 89-93 NN denotes Aqp2
T9050 106-110 NN denotes gene
T9051 94-95 DT denotes a
T9052 96-105 NN denotes candidate
T9053 110-111 . denotes .
T9054 111-340 sentence denotes Sequencing of Aqp2 coding region of affected mice identified a thymine to guanine (T to G) transversion (Figure 1A), which is predicted to lead to a valine for phenylalanine substitution at amino acid 204 of the protein (F204V).
T9055 112-122 NN denotes Sequencing
T9056 162-172 VBD denotes identified
T9057 123-125 IN denotes of
T9058 126-130 NN denotes Aqp2
T9059 138-144 NN denotes region
T9060 131-137 NN denotes coding
T9061 145-147 IN denotes of
T9062 148-156 VBN denotes affected
T9063 157-161 NNS denotes mice
T9064 173-174 DT denotes a
T9065 203-215 NN denotes transversion
T9066 175-182 NN denotes thymine
T9067 183-185 IN denotes to
T9068 186-193 NN denotes guanine
T9069 194-195 -LRB- denotes (
T9070 195-196 NN denotes T
T9071 197-199 IN denotes to
T9072 200-201 NN denotes G
T9073 201-202 -RRB- denotes )
T9074 216-217 -LRB- denotes (
T9075 217-223 NN denotes Figure
T9076 224-226 CD denotes 1A
T9077 226-227 -RRB- denotes )
T9078 227-229 , denotes ,
T9079 229-234 WDT denotes which
T9080 238-247 VBN denotes predicted
T9081 235-237 VBZ denotes is
T9082 248-250 TO denotes to
T9083 251-255 VB denotes lead
T9084 256-258 IN denotes to
T9085 259-260 DT denotes a
T9086 286-298 NN denotes substitution
T9087 261-267 NN denotes valine
T9088 268-271 IN denotes for
T9089 272-285 NN denotes phenylalanine
T9090 299-301 IN denotes at
T9091 302-307 NN denotes amino
T9092 308-312 NN denotes acid
T9093 313-316 CD denotes 204
T9094 317-319 IN denotes of
T9095 320-323 DT denotes the
T9096 324-331 NN denotes protein
T9097 332-333 -LRB- denotes (
T9098 333-338 NN denotes F204V
T9099 338-339 -RRB- denotes )
T9100 339-340 . denotes .
R956 T9086 T9084 pobj substitution,to
R957 T9087 T9086 nmod valine,substitution
R958 T9088 T9087 prep for,valine
R959 T9089 T9088 pobj phenylalanine,for
R960 T9090 T9086 prep at,substitution
R962 T9091 T9092 compound amino,acid
R963 T9092 T9090 pobj acid,at
R964 T9093 T9092 nummod 204,acid
R965 T9094 T9092 prep of,acid
R967 T9095 T9096 det the,protein
R968 T9096 T9094 pobj protein,of
R969 T9097 T9092 punct (,acid
R971 T9098 T9092 appos F204V,acid
R972 T9099 T9092 punct ),acid
R973 T9100 T9056 punct .,identified
R1091 T9034 T9035 det The,disorder
R1095 T9035 T9036 nsubj disorder,segregated
R1099 T9037 T9035 prep in,disorder
R1104 T9038 T9039 det these,mice
R1108 T9039 T9037 pobj mice,in
R1111 T9040 T9036 prep in,segregated
R1118 T9041 T9042 det a,manner
R1122 T9042 T9040 pobj manner,in
R1124 T9043 T9042 amod monogenic,manner
R1127 T9044 T9042 punct ", ",manner
R1132 T9045 T9046 amod autosomal,recessive
R1136 T9046 T9042 amod recessive,manner
R1139 T9047 T9036 punct ", ",segregated
R1143 T9048 T9036 advcl making,segregated
R1147 T9049 T9050 nsubj Aqp2,gene
R1149 T9050 T9048 ccomp gene,making
R1151 T9051 T9050 det a,gene
R1153 T9052 T9050 compound candidate,gene
R1156 T9053 T9036 punct .,segregated
R1160 T9055 T9056 nsubj Sequencing,identified
R1165 T9057 T9055 prep of,Sequencing
R1171 T9058 T9059 compound Aqp2,region
R1175 T9059 T9057 pobj region,of
R1179 T9060 T9059 compound coding,region
R1181 T9061 T9059 prep of,region
R1184 T9062 T9063 amod affected,mice
R1188 T9063 T9061 pobj mice,of
R1192 T9064 T9065 det a,transversion
R1196 T9065 T9056 dobj transversion,identified
R1200 T9066 T9065 nmod thymine,transversion
R1204 T9067 T9066 prep to,thymine
R1208 T9068 T9067 pobj guanine,to
R1212 T9069 T9066 punct (,thymine
R1215 T9070 T9066 appos T,thymine
R1221 T9071 T9070 prep to,T
R1224 T9072 T9071 pobj G,to
R1225 T9073 T9065 punct ),transversion
R1226 T9074 T9075 punct (,Figure
R1229 T9075 T9065 parataxis Figure,transversion
R1232 T9076 T9075 nummod 1A,Figure
R1235 T9077 T9075 punct ),Figure
R1239 T9078 T9065 punct ", ",transversion
R1243 T9079 T9080 dep which,predicted
R1247 T9080 T9065 relcl predicted,transversion
R1252 T9081 T9080 auxpass is,predicted
R1256 T9082 T9083 aux to,lead
R1259 T9083 T9080 xcomp lead,predicted
R1262 T9084 T9083 prep to,lead
R1263 T9085 T9086 det a,substitution