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PMC:1186732 / 11366-11584 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T2151 0-218 sentence denotes In order to confirm these microarray results, an in situ hybridization analysis of the putative up-regulated cone genes was carried out in which the rd7 mutant retina was compared with age-matched, wild-type controls.
T2152 1-3 IN denotes In
T2153 125-132 VBN denotes carried
T2154 4-9 NN denotes order
T2155 10-12 TO denotes to
T2156 13-20 VB denotes confirm
T2157 21-26 DT denotes these
T2158 38-45 NNS denotes results
T2159 27-37 NN denotes microarray
T2160 45-47 , denotes ,
T2161 47-49 DT denotes an
T2162 72-80 NN denotes analysis
T2163 50-52 FW denotes in
T2164 53-57 FW denotes situ
T2165 58-71 NN denotes hybridization
T2166 81-83 IN denotes of
T2167 84-87 DT denotes the
T2168 115-120 NNS denotes genes
T2169 88-96 JJ denotes putative
T2170 97-99 RB denotes up
T2171 100-109 VBN denotes regulated
T2172 99-100 HYPH denotes -
T2173 110-114 NN denotes cone
T2174 121-124 VBD denotes was
T2175 133-136 RP denotes out
T2176 137-139 IN denotes in
T2177 172-180 VBN denotes compared
T2178 140-145 WDT denotes which
T2179 146-149 DT denotes the
T2180 161-167 NN denotes retina
T2181 150-153 NN denotes rd7
T2182 154-160 NN denotes mutant
T2183 168-171 VBD denotes was
T2184 181-185 IN denotes with
T2185 186-189 NN denotes age
T2186 190-197 VBN denotes matched
T2187 189-190 HYPH denotes -
T2188 209-217 NNS denotes controls
T2189 197-199 , denotes ,
T2190 199-203 JJ denotes wild
T2191 204-208 NN denotes type
T2192 203-204 HYPH denotes -
T2193 217-218 . denotes .
R1239 T2152 T2153 prep In,carried
R1240 T2154 T2152 pobj order,In
R1241 T2155 T2156 aux to,confirm
R1242 T2156 T2154 acl confirm,order
R1243 T2157 T2158 det these,results
R1244 T2158 T2156 dobj results,confirm
R1245 T2159 T2158 compound microarray,results
R1246 T2160 T2153 punct ", ",carried
R1247 T2161 T2162 det an,analysis
R1248 T2162 T2153 nsubjpass analysis,carried
R1249 T2163 T2164 advmod in,situ
R1250 T2164 T2162 amod situ,analysis
R1251 T2165 T2162 compound hybridization,analysis
R1252 T2166 T2162 prep of,analysis
R1253 T2167 T2168 det the,genes
R1254 T2168 T2166 pobj genes,of
R1255 T2169 T2168 amod putative,genes
R1256 T2170 T2171 advmod up,regulated
R1257 T2171 T2168 amod regulated,genes
R1258 T2172 T2171 punct -,regulated
R1259 T2173 T2168 compound cone,genes
R1260 T2174 T2153 auxpass was,carried
R1261 T2175 T2153 prt out,carried
R1262 T2176 T2177 prep in,compared
R1263 T2177 T2153 ccomp compared,carried
R1264 T2178 T2176 pobj which,in
R1265 T2179 T2180 det the,retina
R1266 T2180 T2177 nsubjpass retina,compared
R1267 T2181 T2180 compound rd7,retina
R1268 T2182 T2180 compound mutant,retina
R1269 T2183 T2177 auxpass was,compared
R1270 T2184 T2177 prep with,compared
R1271 T2185 T2186 npadvmod age,matched
R1272 T2186 T2188 amod matched,controls
R1273 T2187 T2186 punct -,matched
R1274 T2188 T2184 pobj controls,with
R1275 T2189 T2188 punct ", ",controls
R1276 T2190 T2191 amod wild,type
R1277 T2191 T2188 compound type,controls
R1278 T2192 T2191 punct -,type
R1279 T2193 T2153 punct .,carried

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T2019 58-71 GO:0097617 denotes hybridization
T2020 97-109 GO_EXT:positive_regulation denotes up-regulated
T2021 110-114 CL:0000573 denotes cone
T2022 115-120 SO_EXT:0000704 denotes genes
T2023 154-160 SO_EXT:sequence_altered_entity_or_alteration_process denotes mutant
T2024 161-167 UBERON:0000966 denotes retina
T2025 199-208 SO_EXT:wild_type_entity_or_quality denotes wild-type

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T1929 58-71 GO:0097617 denotes hybridization
T1930 110-114 CL:0000573 denotes cone
T1931 115-120 SO:0000704 denotes genes
T1932 161-167 UBERON:0000966 denotes retina