PMC:1183529 / 32125-32579 JSONTXT

Annnotations TAB JSON ListView MergeView

    craft-ca-core-dev

    {"project":"craft-ca-core-dev","denotations":[{"id":"T16659","span":{"begin":69,"end":74},"obj":"UBERON:0000178"},{"id":"T16660","span":{"begin":100,"end":105},"obj":"UBERON:0000178"},{"id":"T16661","span":{"begin":307,"end":310},"obj":"SO:0000694"}],"text":"DNA from the parents of one autopsy patient was extracted from fresh blood samples. A second set of blood samples was sent to an outside CLIA-certified laboratory for DNA extraction, PCR, sequencing, and analysis. Paternity testing was performed by the outside laboratory using a standard panel of markers. SNP genotyping was done using Harvard Partners Center for Genetics and Genomics genotyping core facility (Cambridge, Massachusetts, United States)."}

    craft-ca-core-ex-dev

    {"project":"craft-ca-core-ex-dev","denotations":[{"id":"T16681","span":{"begin":0,"end":3},"obj":"CHEBI_SO_EXT:DNA"},{"id":"T16682","span":{"begin":69,"end":74},"obj":"UBERON:0000178"},{"id":"T16683","span":{"begin":100,"end":105},"obj":"UBERON:0000178"},{"id":"T16684","span":{"begin":167,"end":170},"obj":"CHEBI_SO_EXT:DNA"},{"id":"T16685","span":{"begin":298,"end":305},"obj":"CHEBI_SO_EXT:molecular_indicator_or_label_or_marker_or_tag"},{"id":"T16686","span":{"begin":307,"end":310},"obj":"SO_EXT:0000694"},{"id":"T16687","span":{"begin":365,"end":373},"obj":"OBI_SO_EXT:gene_or_genetic_investigation_or_genetic_process"}],"text":"DNA from the parents of one autopsy patient was extracted from fresh blood samples. A second set of blood samples was sent to an outside CLIA-certified laboratory for DNA extraction, PCR, sequencing, and analysis. Paternity testing was performed by the outside laboratory using a standard panel of markers. SNP genotyping was done using Harvard Partners Center for Genetics and Genomics genotyping core facility (Cambridge, Massachusetts, United States)."}

    craft-sa-dev

    {"project":"craft-sa-dev","denotations":[{"id":"T16775","span":{"begin":0,"end":3},"obj":"NN"},{"id":"T16776","span":{"begin":48,"end":57},"obj":"VBN"},{"id":"T16777","span":{"begin":4,"end":8},"obj":"IN"},{"id":"T16778","span":{"begin":9,"end":12},"obj":"DT"},{"id":"T16779","span":{"begin":13,"end":20},"obj":"NNS"},{"id":"T16780","span":{"begin":21,"end":23},"obj":"IN"},{"id":"T16781","span":{"begin":24,"end":27},"obj":"CD"},{"id":"T16782","span":{"begin":36,"end":43},"obj":"NN"},{"id":"T16783","span":{"begin":28,"end":35},"obj":"NN"},{"id":"T16784","span":{"begin":44,"end":47},"obj":"VBD"},{"id":"T16785","span":{"begin":58,"end":62},"obj":"IN"},{"id":"T16786","span":{"begin":63,"end":68},"obj":"JJ"},{"id":"T16787","span":{"begin":75,"end":82},"obj":"NNS"},{"id":"T16788","span":{"begin":69,"end":74},"obj":"NN"},{"id":"T16789","span":{"begin":82,"end":83},"obj":"."},{"id":"T16790","span":{"begin":83,"end":213},"obj":"sentence"},{"id":"T16791","span":{"begin":84,"end":85},"obj":"DT"},{"id":"T16792","span":{"begin":93,"end":96},"obj":"NN"},{"id":"T16793","span":{"begin":86,"end":92},"obj":"JJ"},{"id":"T16794","span":{"begin":118,"end":122},"obj":"VBN"},{"id":"T16795","span":{"begin":97,"end":99},"obj":"IN"},{"id":"T16796","span":{"begin":100,"end":105},"obj":"NN"},{"id":"T16797","span":{"begin":106,"end":113},"obj":"NNS"},{"id":"T16798","span":{"begin":114,"end":117},"obj":"VBD"},{"id":"T16799","span":{"begin":123,"end":125},"obj":"IN"},{"id":"T16800","span":{"begin":126,"end":128},"obj":"DT"},{"id":"T16801","span":{"begin":152,"end":162},"obj":"NN"},{"id":"T16802","span":{"begin":129,"end":136},"obj":"JJ"},{"id":"T16803","span":{"begin":137,"end":141},"obj":"NN"},{"id":"T16804","span":{"begin":142,"end":151},"obj":"VBN"},{"id":"T16805","span":{"begin":141,"end":142},"obj":"HYPH"},{"id":"T16806","span":{"begin":163,"end":166},"obj":"IN"},{"id":"T16807","span":{"begin":167,"end":170},"obj":"NN"},{"id":"T16808","span":{"begin":171,"end":181},"obj":"NN"},{"id":"T16809","span":{"begin":181,"end":183},"obj":","},{"id":"T16810","span":{"begin":183,"end":186},"obj":"NN"},{"id":"T16811","span":{"begin":186,"end":188},"obj":","},{"id":"T16812","span":{"begin":188,"end":198},"obj":"NN"},{"id":"T16813","span":{"begin":198,"end":200},"obj":","},{"id":"T16814","span":{"begin":200,"end":203},"obj":"CC"},{"id":"T16815","span":{"begin":204,"end":212},"obj":"NN"},{"id":"T16816","span":{"begin":212,"end":213},"obj":"."},{"id":"T16817","span":{"begin":213,"end":306},"obj":"sentence"},{"id":"T16818","span":{"begin":214,"end":223},"obj":"NN"},{"id":"T16819","span":{"begin":224,"end":231},"obj":"NN"},{"id":"T16820","span":{"begin":236,"end":245},"obj":"VBN"},{"id":"T16821","span":{"begin":232,"end":235},"obj":"VBD"},{"id":"T16822","span":{"begin":246,"end":248},"obj":"IN"},{"id":"T16823","span":{"begin":249,"end":252},"obj":"DT"},{"id":"T16824","span":{"begin":261,"end":271},"obj":"NN"},{"id":"T16825","span":{"begin":253,"end":260},"obj":"JJ"},{"id":"T16826","span":{"begin":272,"end":277},"obj":"VBG"},{"id":"T16827","span":{"begin":278,"end":279},"obj":"DT"},{"id":"T16828","span":{"begin":289,"end":294},"obj":"NN"},{"id":"T16829","span":{"begin":280,"end":288},"obj":"JJ"},{"id":"T16830","span":{"begin":295,"end":297},"obj":"IN"},{"id":"T16831","span":{"begin":298,"end":305},"obj":"NNS"},{"id":"T16832","span":{"begin":305,"end":306},"obj":"."},{"id":"T16833","span":{"begin":306,"end":454},"obj":"sentence"},{"id":"T16834","span":{"begin":307,"end":310},"obj":"NN"},{"id":"T16835","span":{"begin":311,"end":321},"obj":"NN"},{"id":"T16836","span":{"begin":326,"end":330},"obj":"VBN"},{"id":"T16837","span":{"begin":322,"end":325},"obj":"VBD"},{"id":"T16838","span":{"begin":331,"end":336},"obj":"VBG"},{"id":"T16839","span":{"begin":337,"end":344},"obj":"NNP"},{"id":"T16840","span":{"begin":354,"end":360},"obj":"NNP"},{"id":"T16841","span":{"begin":345,"end":353},"obj":"NNPS"},{"id":"T16842","span":{"begin":403,"end":411},"obj":"NN"},{"id":"T16843","span":{"begin":361,"end":364},"obj":"IN"},{"id":"T16844","span":{"begin":365,"end":373},"obj":"NNP"},{"id":"T16845","span":{"begin":374,"end":377},"obj":"CC"},{"id":"T16846","span":{"begin":378,"end":386},"obj":"NNP"},{"id":"T16847","span":{"begin":387,"end":397},"obj":"NN"},{"id":"T16848","span":{"begin":398,"end":402},"obj":"NN"},{"id":"T16849","span":{"begin":412,"end":413},"obj":"-LRB-"},{"id":"T16850","span":{"begin":413,"end":422},"obj":"NNP"},{"id":"T16851","span":{"begin":422,"end":424},"obj":","},{"id":"T16852","span":{"begin":424,"end":437},"obj":"NNP"},{"id":"T16853","span":{"begin":437,"end":439},"obj":","},{"id":"T16854","span":{"begin":439,"end":445},"obj":"NNP"},{"id":"T16855","span":{"begin":446,"end":452},"obj":"NNP"},{"id":"T16856","span":{"begin":452,"end":453},"obj":"-RRB-"},{"id":"T16857","span":{"begin":453,"end":454},"obj":"."}],"relations":[{"id":"R4840","pred":"nsubjpass","subj":"T16775","obj":"T16776"},{"id":"R4841","pred":"prep","subj":"T16777","obj":"T16775"},{"id":"R4842","pred":"det","subj":"T16778","obj":"T16779"},{"id":"R4843","pred":"pobj","subj":"T16779","obj":"T16777"},{"id":"R4844","pred":"prep","subj":"T16780","obj":"T16779"},{"id":"R4845","pred":"nummod","subj":"T16781","obj":"T16782"},{"id":"R4846","pred":"pobj","subj":"T16782","obj":"T16780"},{"id":"R4847","pred":"compound","subj":"T16783","obj":"T16782"},{"id":"R4848","pred":"auxpass","subj":"T16784","obj":"T16776"},{"id":"R4849","pred":"prep","subj":"T16785","obj":"T16776"},{"id":"R4850","pred":"amod","subj":"T16786","obj":"T16787"},{"id":"R4851","pred":"pobj","subj":"T16787","obj":"T16785"},{"id":"R4852","pred":"compound","subj":"T16788","obj":"T16787"},{"id":"R4853","pred":"punct","subj":"T16789","obj":"T16776"},{"id":"R4854","pred":"det","subj":"T16791","obj":"T16792"},{"id":"R4855","pred":"nsubjpass","subj":"T16792","obj":"T16794"},{"id":"R4856","pred":"amod","subj":"T16793","obj":"T16792"},{"id":"R4857","pred":"prep","subj":"T16795","obj":"T16792"},{"id":"R4858","pred":"compound","subj":"T16796","obj":"T16797"},{"id":"R4859","pred":"pobj","subj":"T16797","obj":"T16795"},{"id":"R4860","pred":"auxpass","subj":"T16798","obj":"T16794"},{"id":"R4861","pred":"prep","subj":"T16799","obj":"T16794"},{"id":"R4862","pred":"det","subj":"T16800","obj":"T16801"},{"id":"R4863","pred":"pobj","subj":"T16801","obj":"T16799"},{"id":"R4864","pred":"amod","subj":"T16802","obj":"T16801"},{"id":"R4865","pred":"npadvmod","subj":"T16803","obj":"T16804"},{"id":"R4866","pred":"amod","subj":"T16804","obj":"T16801"},{"id":"R4867","pred":"punct","subj":"T16805","obj":"T16804"},{"id":"R4868","pred":"prep","subj":"T16806","obj":"T16794"},{"id":"R4869","pred":"compound","subj":"T16807","obj":"T16808"},{"id":"R4870","pred":"pobj","subj":"T16808","obj":"T16806"},{"id":"R4871","pred":"punct","subj":"T16809","obj":"T16808"},{"id":"R4872","pred":"conj","subj":"T16810","obj":"T16808"},{"id":"R4873","pred":"punct","subj":"T16811","obj":"T16810"},{"id":"R4874","pred":"conj","subj":"T16812","obj":"T16810"},{"id":"R4875","pred":"punct","subj":"T16813","obj":"T16812"},{"id":"R4876","pred":"cc","subj":"T16814","obj":"T16812"},{"id":"R4877","pred":"conj","subj":"T16815","obj":"T16812"},{"id":"R4878","pred":"punct","subj":"T16816","obj":"T16794"},{"id":"R4879","pred":"compound","subj":"T16818","obj":"T16819"},{"id":"R4880","pred":"nsubjpass","subj":"T16819","obj":"T16820"},{"id":"R4881","pred":"auxpass","subj":"T16821","obj":"T16820"},{"id":"R4882","pred":"agent","subj":"T16822","obj":"T16820"},{"id":"R4883","pred":"det","subj":"T16823","obj":"T16824"},{"id":"R4884","pred":"pobj","subj":"T16824","obj":"T16822"},{"id":"R4885","pred":"amod","subj":"T16825","obj":"T16824"},{"id":"R4886","pred":"advcl","subj":"T16826","obj":"T16820"},{"id":"R4887","pred":"det","subj":"T16827","obj":"T16828"},{"id":"R4888","pred":"dobj","subj":"T16828","obj":"T16826"},{"id":"R4889","pred":"amod","subj":"T16829","obj":"T16828"},{"id":"R4890","pred":"prep","subj":"T16830","obj":"T16828"},{"id":"R4891","pred":"pobj","subj":"T16831","obj":"T16830"},{"id":"R4892","pred":"punct","subj":"T16832","obj":"T16820"},{"id":"R4893","pred":"compound","subj":"T16834","obj":"T16835"},{"id":"R4894","pred":"nsubjpass","subj":"T16835","obj":"T16836"},{"id":"R4895","pred":"auxpass","subj":"T16837","obj":"T16836"},{"id":"R4896","pred":"advcl","subj":"T16838","obj":"T16836"},{"id":"R4897","pred":"nmod","subj":"T16839","obj":"T16840"},{"id":"R4898","pred":"nmod","subj":"T16840","obj":"T16842"},{"id":"R4899","pred":"nmod","subj":"T16841","obj":"T16840"},{"id":"R4900","pred":"dobj","subj":"T16842","obj":"T16838"},{"id":"R4901","pred":"prep","subj":"T16843","obj":"T16840"},{"id":"R4902","pred":"pobj","subj":"T16844","obj":"T16843"},{"id":"R4903","pred":"cc","subj":"T16845","obj":"T16844"},{"id":"R4904","pred":"conj","subj":"T16846","obj":"T16844"},{"id":"R4905","pred":"compound","subj":"T16847","obj":"T16842"},{"id":"R4906","pred":"compound","subj":"T16848","obj":"T16842"},{"id":"R4907","pred":"punct","subj":"T16849","obj":"T16850"},{"id":"R4908","pred":"parataxis","subj":"T16850","obj":"T16842"},{"id":"R4909","pred":"punct","subj":"T16851","obj":"T16850"},{"id":"R4910","pred":"npadvmod","subj":"T16852","obj":"T16850"},{"id":"R4911","pred":"punct","subj":"T16853","obj":"T16850"},{"id":"R4912","pred":"compound","subj":"T16854","obj":"T16855"},{"id":"R4913","pred":"npadvmod","subj":"T16855","obj":"T16850"},{"id":"R4914","pred":"punct","subj":"T16856","obj":"T16850"},{"id":"R4915","pred":"punct","subj":"T16857","obj":"T16836"}],"text":"DNA from the parents of one autopsy patient was extracted from fresh blood samples. A second set of blood samples was sent to an outside CLIA-certified laboratory for DNA extraction, PCR, sequencing, and analysis. Paternity testing was performed by the outside laboratory using a standard panel of markers. SNP genotyping was done using Harvard Partners Center for Genetics and Genomics genotyping core facility (Cambridge, Massachusetts, United States)."}