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PMC:1183529 / 27350-28030 JSONTXT

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craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T12814 43-47 PR:000017653 denotes Fog2
T12815 55-60 NCBITaxon:10088 denotes mouse
T12816 94-107 UBERON:0001103 denotes diaphragmatic
T12817 136-145 UBERON:0002048 denotes pulmonary
T12818 209-213 SO:0000704 denotes gene
T12819 252-256 UBERON:0002048 denotes lung
T12820 252-256 _FRAGMENT denotes lung
T12821 271-282 GO:0030324 denotes development
T12822 261-270 UBERON:0001103 denotes diaphragm
T12823 261-282 GO:0060539 denotes diaphragm development
T12824 345-349 PR:000017653 denotes Fog2
T12825 382-386 PR:000017653 denotes Fog2
T12826 397-402 NCBITaxon:10088 denotes mouse
T12827 416-425 UBERON:0001103 denotes diaphragm
T12828 416-425 _FRAGMENT denotes diaphragm
T12829 435-446 GO:0060539 denotes development
T12830 430-434 UBERON:0002048 denotes lung
T12831 430-446 GO:0030324 denotes lung development
T12832 666-671 NCBITaxon:9606 denotes human
R3000 T12821 T12820 _lexicallyChainedTo development,lung
R3001 T12829 T12828 _lexicallyChainedTo development,diaphragm

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T13011 31-39 SO_EXT:sequence_alteration_entity_or_process denotes mutation
T13012 43-47 PR_EXT:000017653 denotes Fog2
T13013 55-60 NCBITaxon:10088 denotes mouse
T13014 94-107 UBERON:0001103 denotes diaphragmatic
T13015 108-123 GO_EXT:muscle_structure_or_tissue_development denotes muscularization
T13016 136-145 UBERON:0002048 denotes pulmonary
T13017 192-200 SO_EXT:sequence_alteration_entity_or_process denotes mutation
T13018 209-213 SO_EXT:0000704 denotes gene
T13019 235-241 GO_EXT:fatality_or_lethality denotes lethal
T13020 252-256 UBERON:0002048 denotes lung
T13021 252-256 _FRAGMENT denotes lung
T13022 271-282 GO:0030324 denotes development
T13023 261-270 UBERON:0001103 denotes diaphragm
T13024 261-282 GO:0060539 denotes diaphragm development
T13025 288-293 NCBITaxon_UBERON_EXT:child denotes child
T13026 345-349 PR_EXT:000017653 denotes Fog2
T13027 350-357 CHEBI_GO_EXT:biological_process_or_quality_or_role denotes biology
T13028 382-386 PR_EXT:000017653 denotes Fog2
T13029 397-402 NCBITaxon:10088 denotes mouse
T13030 416-425 UBERON:0001103 denotes diaphragm
T13031 416-425 _FRAGMENT denotes diaphragm
T13032 435-446 GO:0060539 denotes development
T13033 430-434 UBERON:0002048 denotes lung
T13034 430-446 GO:0030324 denotes lung development
T13035 624-633 CHEBI_EXT:polyatomic_entity_or_group denotes molecular
T13036 666-671 NCBITaxon:9606 denotes human
R3006 T13022 T13021 _lexicallyChainedTo development,lung
R3007 T13032 T13031 _lexicallyChainedTo development,diaphragm

craft-sa-dev

Id Subject Object Predicate Lexical cue
T14119 0-2 IN denotes In
T14120 19-23 VBP denotes show
T14121 3-7 DT denotes this
T14122 8-14 NN denotes report
T14123 14-16 , denotes ,
T14124 16-18 PRP denotes we
T14125 24-28 IN denotes that
T14126 61-67 VBZ denotes causes
T14127 29-30 DT denotes a
T14128 31-39 NN denotes mutation
T14129 40-42 IN denotes of
T14130 43-47 NN denotes Fog2
T14131 48-50 IN denotes in
T14132 51-54 DT denotes the
T14133 55-60 NN denotes mouse
T14134 68-71 DT denotes the
T14135 72-81 NN denotes phenotype
T14136 82-84 IN denotes of
T14137 85-93 JJ denotes abnormal
T14138 108-123 NN denotes muscularization
T14139 94-107 JJ denotes diaphragmatic
T14140 124-127 CC denotes and
T14141 128-135 JJ denotes primary
T14142 146-156 NN denotes hypoplasia
T14143 136-145 JJ denotes pulmonary
T14144 156-157 . denotes .
T14145 157-294 sentence denotes We furthermore demonstrate that a mutation in this gene is associated with a lethal defect in lung and diaphragm development in a child.
T14146 158-160 PRP denotes We
T14147 173-184 VBP denotes demonstrate
T14148 161-172 RB denotes furthermore
T14149 185-189 IN denotes that
T14150 214-216 VBZ denotes is
T14151 190-191 DT denotes a
T14152 192-200 NN denotes mutation
T14153 201-203 IN denotes in
T14154 204-208 DT denotes this
T14155 209-213 NN denotes gene
T14156 217-227 JJ denotes associated
T14157 228-232 IN denotes with
T14158 233-234 DT denotes a
T14159 242-248 NN denotes defect
T14160 235-241 JJ denotes lethal
T14161 249-251 IN denotes in
T14162 252-256 NN denotes lung
T14163 271-282 NN denotes development
T14164 257-260 CC denotes and
T14165 261-270 NN denotes diaphragm
T14166 283-285 IN denotes in
T14167 286-287 DT denotes a
T14168 288-293 NN denotes child
T14169 293-294 . denotes .
T14170 294-477 sentence denotes It is notable that, despite extensive analysis of Fog2 biology and the generation of a Fog2 knock-out mouse, its role in diaphragm and lung development was previously not recognized.
T14171 295-297 PRP denotes It
T14172 298-300 VBZ denotes is
T14173 301-308 JJ denotes notable
T14174 309-313 IN denotes that
T14175 466-476 VBN denotes recognized
T14176 313-315 , denotes ,
T14177 315-322 IN denotes despite
T14178 323-332 JJ denotes extensive
T14179 333-341 NN denotes analysis
T14180 342-344 IN denotes of
T14181 345-349 NN denotes Fog2
T14182 350-357 NN denotes biology
T14183 358-361 CC denotes and
T14184 362-365 DT denotes the
T14185 366-376 NN denotes generation
T14186 377-379 IN denotes of
T14187 380-381 DT denotes a
T14188 397-402 NN denotes mouse
T14189 382-386 NN denotes Fog2
T14190 387-392 VB denotes knock
T14191 392-393 HYPH denotes -
T14192 393-396 RP denotes out
T14193 402-404 , denotes ,
T14194 404-407 PRP$ denotes its
T14195 408-412 NN denotes role
T14196 413-415 IN denotes in
T14197 416-425 NN denotes diaphragm
T14198 435-446 NN denotes development
T14199 426-429 CC denotes and
T14200 430-434 NN denotes lung
T14201 447-450 VBD denotes was
T14202 451-461 RB denotes previously
T14203 462-465 RB denotes not
T14204 476-477 . denotes .
T14205 477-680 sentence denotes It is only as a consequence of phenotype-driven analyses such as those we are pursuing that one has the opportunity to assay all of the potential molecular derangements that may result in human disease.
T14206 478-480 PRP denotes It
T14207 481-483 VBZ denotes is
T14208 484-488 RB denotes only
T14209 489-491 IN denotes as
T14210 492-493 DT denotes a
T14211 494-505 NN denotes consequence
T14212 506-508 IN denotes of
T14213 509-518 NN denotes phenotype
T14214 519-525 VBN denotes driven
T14215 518-519 HYPH denotes -
T14216 526-534 NNS denotes analyses
T14217 535-539 JJ denotes such
T14218 540-542 IN denotes as
T14219 543-548 DT denotes those
T14220 549-551 PRP denotes we
T14221 556-564 VBG denotes pursuing
T14222 552-555 VBP denotes are
T14223 565-569 IN denotes that
T14224 574-577 VBZ denotes has
T14225 570-573 PRP denotes one
T14226 578-581 DT denotes the
T14227 582-593 NN denotes opportunity
T14228 594-596 TO denotes to
T14229 597-602 VB denotes assay
T14230 603-606 DT denotes all
T14231 607-609 IN denotes of
T14232 610-613 DT denotes the
T14233 634-646 NNS denotes derangements
T14234 614-623 JJ denotes potential
T14235 624-633 JJ denotes molecular
T14236 647-651 WDT denotes that
T14237 656-662 VB denotes result
T14238 652-655 MD denotes may
T14239 663-665 IN denotes in
T14240 666-671 JJ denotes human
T14241 672-679 NN denotes disease
T14242 679-680 . denotes .
R4011 T14206 T14207 nsubj It,is
R4013 T14208 T14209 advmod only,as
R4014 T14209 T14207 prep as,is
R4016 T14210 T14211 det a,consequence
R4017 T14211 T14209 pobj consequence,as
R4018 T14212 T14211 prep of,consequence
R4020 T14213 T14214 npadvmod phenotype,driven
R4021 T14214 T14216 amod driven,analyses
R4022 T14215 T14214 punct -,driven
R4024 T14216 T14212 pobj analyses,of
R4025 T14217 T14218 amod such,as
R4026 T14218 T14216 prep as,analyses
R4028 T14219 T14218 pobj those,as
R4029 T14220 T14221 nsubj we,pursuing
R4030 T14221 T14219 advcl pursuing,those
R4032 T14222 T14221 aux are,pursuing
R4033 T14223 T14224 mark that,has
R4034 T14224 T14207 ccomp has,is
R4035 T14225 T14224 nsubj one,has
R4036 T14226 T14227 det the,opportunity
R4038 T14227 T14224 dobj opportunity,has
R4039 T14228 T14229 aux to,assay
R4040 T14229 T14227 acl assay,opportunity
R4041 T14230 T14229 dobj all,assay
R4043 T14231 T14230 prep of,all
R4044 T14232 T14233 det the,derangements
R4045 T14233 T14231 pobj derangements,of
R4047 T14234 T14233 amod potential,derangements
R4048 T14235 T14233 amod molecular,derangements
R4049 T14119 T14120 prep In,show
R4050 T14236 T14237 dep that,result
R4051 T14237 T14233 relcl result,derangements
R4052 T14238 T14237 aux may,result
R4053 T14121 T14122 det this,report
R4054 T14239 T14237 prep in,result
R4055 T14240 T14241 amod human,disease
R4056 T14122 T14119 pobj report,In
R4057 T14241 T14239 pobj disease,in
R4058 T14242 T14207 punct .,is
R4059 T14123 T14120 punct ", ",show
R4060 T14124 T14120 nsubj we,show
R4061 T14125 T14126 mark that,causes
R4062 T14126 T14120 ccomp causes,show
R4063 T14127 T14128 det a,mutation
R4064 T14128 T14126 nsubj mutation,causes
R4065 T14129 T14128 prep of,mutation
R4066 T14130 T14129 pobj Fog2,of
R4067 T14131 T14128 prep in,mutation
R4068 T14132 T14133 det the,mouse
R4069 T14133 T14131 pobj mouse,in
R4070 T14134 T14135 det the,phenotype
R4071 T14135 T14126 dobj phenotype,causes
R4072 T14136 T14135 prep of,phenotype
R4073 T14137 T14138 amod abnormal,muscularization
R4074 T14138 T14136 pobj muscularization,of
R4075 T14139 T14138 amod diaphragmatic,muscularization
R4076 T14140 T14138 cc and,muscularization
R4077 T14141 T14142 amod primary,hypoplasia
R4078 T14142 T14138 conj hypoplasia,muscularization
R4079 T14143 T14142 amod pulmonary,hypoplasia
R4080 T14144 T14120 punct .,show
R4081 T14146 T14147 nsubj We,demonstrate
R4082 T14148 T14147 advmod furthermore,demonstrate
R4083 T14149 T14150 mark that,is
R4084 T14150 T14147 ccomp is,demonstrate
R4085 T14151 T14152 det a,mutation
R4086 T14152 T14150 nsubj mutation,is
R4087 T14153 T14152 prep in,mutation
R4088 T14154 T14155 det this,gene
R4089 T14155 T14153 pobj gene,in
R4090 T14156 T14150 acomp associated,is
R4091 T14157 T14156 prep with,associated
R4092 T14158 T14159 det a,defect
R4093 T14159 T14157 pobj defect,with
R4094 T14160 T14159 amod lethal,defect
R4095 T14161 T14159 prep in,defect
R4096 T14162 T14163 nmod lung,development
R4097 T14163 T14161 pobj development,in
R4098 T14164 T14162 cc and,lung
R4099 T14165 T14162 conj diaphragm,lung
R4100 T14166 T14159 prep in,defect
R4101 T14167 T14168 det a,child
R4102 T14168 T14166 pobj child,in
R4103 T14169 T14147 punct .,demonstrate
R4104 T14171 T14172 nsubj It,is
R4105 T14173 T14172 acomp notable,is
R4106 T14174 T14175 mark that,recognized
R4107 T14175 T14172 ccomp recognized,is
R4108 T14176 T14175 punct ", ",recognized
R4109 T14177 T14175 prep despite,recognized
R4110 T14178 T14179 amod extensive,analysis
R4111 T14179 T14177 pobj analysis,despite
R4112 T14180 T14179 prep of,analysis
R4113 T14181 T14182 compound Fog2,biology
R4114 T14182 T14180 pobj biology,of
R4115 T14183 T14179 cc and,analysis
R4116 T14184 T14185 det the,generation
R4117 T14185 T14179 conj generation,analysis
R4118 T14186 T14185 prep of,generation
R4119 T14187 T14188 det a,mouse
R4120 T14188 T14186 pobj mouse,of
R4121 T14189 T14188 nmod Fog2,mouse
R4122 T14190 T14188 amod knock,mouse
R4123 T14191 T14190 punct -,knock
R4124 T14192 T14190 prt out,knock
R4125 T14193 T14175 punct ", ",recognized
R4126 T14194 T14195 poss its,role
R4127 T14195 T14175 nsubjpass role,recognized
R4128 T14196 T14195 prep in,role
R4129 T14197 T14198 nmod diaphragm,development
R4130 T14198 T14196 pobj development,in
R4131 T14199 T14197 cc and,diaphragm
R4132 T14200 T14197 conj lung,diaphragm
R4133 T14201 T14175 auxpass was,recognized
R4134 T14202 T14175 advmod previously,recognized
R4135 T14203 T14175 neg not,recognized
R4136 T14204 T14172 punct .,is