> top > docs > PMC:1181811 > spans > 3184-4296 > annotations

PMC:1181811 / 3184-4296 JSONTXT

Annnotations TAB JSON ListView MergeView

craft-sa-dev

Id Subject Object Predicate Lexical cue
T983 0-7 JJ denotes Several
T984 27-31 NNS denotes loci
T985 8-20 JJ denotes quantitative
T986 21-26 NN denotes trait
T987 48-58 VBN denotes identified
T988 32-33 -LRB- denotes (
T989 33-36 NN denotes QTL
T990 36-37 -RRB- denotes )
T991 38-42 VBP denotes have
T992 43-47 VBN denotes been
T993 59-63 WDT denotes that
T994 64-73 VBP denotes influence
T995 74-77 CD denotes two
T996 78-84 NN denotes bottle
T997 77-78 HYPH denotes -
T998 85-91 NN denotes intake
T999 92-94 IN denotes of
T1000 95-101 JJ denotes bitter
T1001 102-109 NNS denotes stimuli
T1002 110-112 IN denotes in
T1003 113-116 DT denotes the
T1004 117-122 NN denotes mouse
T1005 122-124 , denotes ,
T1006 124-133 VBG denotes including
T1007 134-138 NNS denotes loci
T1008 139-142 IN denotes for
T1009 143-150 NN denotes quinine
T1010 235-246 NN denotes sensitivity
T1011 151-152 -LRB- denotes (
T1012 152-155 NN denotes Qui
T1013 155-156 -RRB- denotes )
T1014 157-158 -LRB- denotes [
T1015 164-166 CD denotes 26
T1016 158-160 CD denotes 12
T1017 160-161 , denotes ,
T1018 161-163 CD denotes 16
T1019 163-164 , denotes ,
T1020 166-167 -RRB- denotes ]
T1021 167-169 , denotes ,
T1022 169-182 NN denotes cyclohexamide
T1023 183-184 -LRB- denotes (
T1024 184-187 NN denotes Cyx
T1025 187-188 -RRB- denotes )
T1026 189-190 -LRB- denotes [
T1027 190-192 CD denotes 13
T1028 192-193 -RRB- denotes ]
T1029 194-197 CC denotes and
T1030 198-205 NN denotes sucrose
T1031 206-217 NN denotes octaacetate
T1032 218-219 -LRB- denotes (
T1033 219-222 NN denotes Soa
T1034 222-223 -RRB- denotes )
T1035 224-225 -LRB- denotes [
T1036 231-233 CD denotes 17
T1037 225-227 CD denotes 14
T1038 227-228 , denotes ,
T1039 228-230 CD denotes 15
T1040 230-231 , denotes ,
T1041 233-234 -RRB- denotes ]
T1042 246-247 . denotes .
T1043 247-426 sentence denotes Each of these QTL map to mouse distal chromosome 6 and are linked to the marker D6Mit13, which lies within a cluster of 24 intact Tas2rs in the C57BL/6 genome (e.g., [16,27,28]).
T1044 248-252 DT denotes Each
T1045 266-269 VBP denotes map
T1046 253-255 IN denotes of
T1047 256-261 DT denotes these
T1048 262-265 NN denotes QTL
T1049 270-272 IN denotes to
T1050 273-278 NN denotes mouse
T1051 286-296 NN denotes chromosome
T1052 279-285 JJ denotes distal
T1053 297-298 CD denotes 6
T1054 299-302 CC denotes and
T1055 303-306 VBP denotes are
T1056 307-313 VBN denotes linked
T1057 314-316 IN denotes to
T1058 317-320 DT denotes the
T1059 328-335 NN denotes D6Mit13
T1060 321-327 NN denotes marker
T1061 335-337 , denotes ,
T1062 337-342 WDT denotes which
T1063 343-347 VBZ denotes lies
T1064 348-354 IN denotes within
T1065 355-356 DT denotes a
T1066 357-364 NN denotes cluster
T1067 365-367 IN denotes of
T1068 368-370 CD denotes 24
T1069 378-384 NNS denotes Tas2rs
T1070 371-377 JJ denotes intact
T1071 385-387 IN denotes in
T1072 388-391 DT denotes the
T1073 400-406 NN denotes genome
T1074 392-397 NN denotes C57BL
T1075 397-398 HYPH denotes /
T1076 398-399 CD denotes 6
T1077 407-408 -LRB- denotes (
T1078 421-423 CD denotes 28
T1079 408-412 FW denotes e.g.
T1080 412-414 , denotes ,
T1081 414-415 -LRB- denotes [
T1082 415-417 CD denotes 16
T1083 417-418 , denotes ,
T1084 418-420 CD denotes 27
T1085 420-421 , denotes ,
T1086 423-424 -RRB- denotes ]
T1087 424-425 -RRB- denotes )
T1088 425-426 . denotes .
T1089 426-508 sentence denotes However, the interpretation of these studies remains problematic for two reasons.
T1090 427-434 RB denotes However
T1091 472-479 VBZ denotes remains
T1092 434-436 , denotes ,
T1093 436-439 DT denotes the
T1094 440-454 NN denotes interpretation
T1095 455-457 IN denotes of
T1096 458-463 DT denotes these
T1097 464-471 NNS denotes studies
T1098 480-491 JJ denotes problematic
T1099 492-495 IN denotes for
T1100 496-499 CD denotes two
T1101 500-507 NNS denotes reasons
T1102 507-508 . denotes .
T1103 508-703 sentence denotes First, the density of chromosomal markers and number of recombinant inbred (RI) strains used in these earlier studies did not permit the physical definition of the intervals containing each QTL.
T1104 509-514 RB denotes First
T1105 635-641 VB denotes permit
T1106 514-516 , denotes ,
T1107 516-519 DT denotes the
T1108 520-527 NN denotes density
T1109 528-530 IN denotes of
T1110 531-542 JJ denotes chromosomal
T1111 543-550 NNS denotes markers
T1112 551-554 CC denotes and
T1113 555-561 NN denotes number
T1114 562-564 IN denotes of
T1115 565-576 JJ denotes recombinant
T1116 577-583 JJ denotes inbred
T1117 585-587 JJ denotes RI
T1118 584-585 -LRB- denotes (
T1119 589-596 NNS denotes strains
T1120 587-588 -RRB- denotes )
T1121 597-601 VBN denotes used
T1122 602-604 IN denotes in
T1123 605-610 DT denotes these
T1124 619-626 NNS denotes studies
T1125 611-618 JJR denotes earlier
T1126 627-630 VBD denotes did
T1127 631-634 RB denotes not
T1128 642-645 DT denotes the
T1129 655-665 NN denotes definition
T1130 646-654 JJ denotes physical
T1131 666-668 IN denotes of
T1132 669-672 DT denotes the
T1133 673-682 NNS denotes intervals
T1134 683-693 VBG denotes containing
T1135 694-698 DT denotes each
T1136 699-702 NN denotes QTL
T1137 702-703 . denotes .
T1138 703-902 sentence denotes Second, these previous attempts to map bitter taste QTLs relied on behavioral assays that measured consumption, and were thus susceptible to contributions of post-ingestive effects such as toxicity.
T1139 704-710 RB denotes Second
T1140 761-767 VBD denotes relied
T1141 710-712 , denotes ,
T1142 712-717 DT denotes these
T1143 727-735 NNS denotes attempts
T1144 718-726 JJ denotes previous
T1145 736-738 TO denotes to
T1146 739-742 VB denotes map
T1147 743-749 JJ denotes bitter
T1148 750-755 NN denotes taste
T1149 756-760 NNS denotes QTLs
T1150 768-770 IN denotes on
T1151 771-781 JJ denotes behavioral
T1152 782-788 NNS denotes assays
T1153 789-793 WDT denotes that
T1154 794-802 VBN denotes measured
T1155 803-814 NN denotes consumption
T1156 814-816 , denotes ,
T1157 816-819 CC denotes and
T1158 820-824 VBD denotes were
T1159 825-829 RB denotes thus
T1160 830-841 JJ denotes susceptible
T1161 842-844 IN denotes to
T1162 845-858 NNS denotes contributions
T1163 859-861 IN denotes of
T1164 862-876 JJ denotes post-ingestive
T1165 877-884 NNS denotes effects
T1166 885-889 JJ denotes such
T1167 890-892 IN denotes as
T1168 893-901 NN denotes toxicity
T1169 901-902 . denotes .
T1170 902-1008 sentence denotes As we have shown previously, such effects can confound the quantification of bitter taste behaviors [29].
T1171 903-905 IN denotes As
T1172 914-919 VBN denotes shown
T1173 906-908 PRP denotes we
T1174 909-913 VBP denotes have
T1175 949-957 VB denotes confound
T1176 920-930 RB denotes previously
T1177 930-932 , denotes ,
T1178 932-936 JJ denotes such
T1179 937-944 NNS denotes effects
T1180 945-948 MD denotes can
T1181 958-961 DT denotes the
T1182 962-976 NN denotes quantification
T1183 977-979 IN denotes of
T1184 980-986 JJ denotes bitter
T1185 987-992 NN denotes taste
T1186 993-1002 NNS denotes behaviors
T1187 1003-1004 -LRB- denotes [
T1188 1004-1006 CD denotes 29
T1189 1006-1007 -RRB- denotes ]
T1190 1007-1008 . denotes .
T1191 1008-1112 sentence denotes Therefore, the relevance and/or contribution of the aforementioned QTLs to bitter taste remain unclear.
T1192 1009-1018 RB denotes Therefore
T1193 1097-1103 VBP denotes remain
T1194 1018-1020 , denotes ,
T1195 1020-1023 DT denotes the
T1196 1024-1033 NN denotes relevance
T1197 1034-1037 CC denotes and
T1198 1037-1038 HYPH denotes /
T1199 1038-1040 CC denotes or
T1200 1041-1053 NN denotes contribution
T1201 1054-1056 IN denotes of
T1202 1057-1060 DT denotes the
T1203 1076-1080 NNS denotes QTLs
T1204 1061-1075 JJ denotes aforementioned
T1205 1081-1083 IN denotes to
T1206 1084-1090 JJ denotes bitter
T1207 1091-1096 NN denotes taste
T1208 1104-1111 JJ denotes unclear
T1209 1111-1112 . denotes .
R604 T983 T984 amod Several,loci
R605 T984 T987 nsubjpass loci,identified
R606 T985 T984 amod quantitative,loci
R607 T986 T984 compound trait,loci
R608 T988 T984 punct (,loci
R609 T989 T984 appos QTL,loci
R610 T990 T987 punct ),identified
R611 T991 T987 aux have,identified
R612 T992 T987 auxpass been,identified
R613 T993 T994 dep that,influence
R614 T994 T987 ccomp influence,identified
R615 T995 T996 nummod two,bottle
R616 T996 T998 compound bottle,intake
R617 T997 T996 punct -,bottle
R618 T998 T994 dobj intake,influence
R619 T999 T998 prep of,intake
R620 T1000 T1001 amod bitter,stimuli
R621 T1001 T999 pobj stimuli,of
R622 T1002 T998 prep in,intake
R623 T1003 T1004 det the,mouse
R624 T1004 T1002 pobj mouse,in
R625 T1005 T987 punct ", ",identified
R626 T1006 T987 prep including,identified
R627 T1007 T1006 pobj loci,including
R628 T1008 T1007 prep for,loci
R629 T1009 T1010 nmod quinine,sensitivity
R630 T1010 T1008 pobj sensitivity,for
R631 T1011 T1009 punct (,quinine
R632 T1012 T1009 appos Qui,quinine
R633 T1013 T1009 punct ),quinine
R634 T1014 T1015 punct [,26
R635 T1015 T1009 parataxis 26,quinine
R636 T1016 T1015 nummod 12,26
R637 T1017 T1015 punct ",",26
R638 T1018 T1015 nummod 16,26
R639 T1019 T1015 punct ",",26
R640 T1020 T1015 punct ],26
R641 T1021 T1009 punct ", ",quinine
R642 T1022 T1009 conj cyclohexamide,quinine
R643 T1023 T1022 punct (,cyclohexamide
R644 T1024 T1022 appos Cyx,cyclohexamide
R645 T1025 T1022 punct ),cyclohexamide
R646 T1026 T1027 punct [,13
R647 T1027 T1022 parataxis 13,cyclohexamide
R648 T1028 T1027 punct ],13
R649 T1029 T1022 cc and,cyclohexamide
R650 T1030 T1031 compound sucrose,octaacetate
R651 T1031 T1022 conj octaacetate,cyclohexamide
R652 T1032 T1031 punct (,octaacetate
R653 T1033 T1031 appos Soa,octaacetate
R654 T1034 T1031 punct ),octaacetate
R655 T1035 T1036 punct [,17
R656 T1036 T1031 parataxis 17,octaacetate
R657 T1037 T1036 nummod 14,17
R658 T1038 T1036 punct ",",17
R659 T1039 T1036 nummod 15,17
R660 T1040 T1036 punct ",",17
R661 T1041 T1036 punct ],17
R662 T1042 T987 punct .,identified
R663 T1044 T1045 nsubj Each,map
R664 T1046 T1044 prep of,Each
R665 T1047 T1048 det these,QTL
R666 T1048 T1046 pobj QTL,of
R667 T1049 T1045 prep to,map
R668 T1050 T1051 nmod mouse,chromosome
R669 T1051 T1049 pobj chromosome,to
R670 T1052 T1051 amod distal,chromosome
R671 T1053 T1051 nummod 6,chromosome
R672 T1054 T1045 cc and,map
R673 T1055 T1056 auxpass are,linked
R674 T1056 T1045 conj linked,map
R675 T1057 T1056 prep to,linked
R676 T1058 T1059 det the,D6Mit13
R677 T1059 T1057 pobj D6Mit13,to
R678 T1060 T1059 compound marker,D6Mit13
R679 T1061 T1059 punct ", ",D6Mit13
R680 T1062 T1063 dep which,lies
R681 T1063 T1059 relcl lies,D6Mit13
R682 T1064 T1063 prep within,lies
R683 T1065 T1066 det a,cluster
R684 T1066 T1064 pobj cluster,within
R685 T1067 T1066 prep of,cluster
R686 T1068 T1069 nummod 24,Tas2rs
R687 T1069 T1067 pobj Tas2rs,of
R688 T1070 T1069 amod intact,Tas2rs
R689 T1071 T1063 prep in,lies
R690 T1072 T1073 det the,genome
R691 T1073 T1071 pobj genome,in
R692 T1074 T1073 nmod C57BL,genome
R693 T1075 T1074 punct /,C57BL
R694 T1076 T1074 nummod 6,C57BL
R695 T1077 T1078 punct (,28
R696 T1078 T1063 parataxis 28,lies
R697 T1079 T1078 advmod e.g.,28
R698 T1080 T1078 punct ", ",28
R699 T1081 T1078 punct [,28
R700 T1082 T1078 nummod 16,28
R701 T1083 T1078 punct ",",28
R702 T1084 T1078 nummod 27,28
R703 T1085 T1078 punct ",",28
R704 T1086 T1078 punct ],28
R705 T1087 T1078 punct ),28
R706 T1088 T1045 punct .,map
R707 T1090 T1091 advmod However,remains
R708 T1092 T1091 punct ", ",remains
R709 T1093 T1094 det the,interpretation
R710 T1094 T1091 nsubj interpretation,remains
R711 T1095 T1094 prep of,interpretation
R712 T1096 T1097 det these,studies
R713 T1097 T1095 pobj studies,of
R714 T1098 T1091 acomp problematic,remains
R715 T1099 T1091 prep for,remains
R716 T1100 T1101 nummod two,reasons
R717 T1101 T1099 pobj reasons,for
R718 T1102 T1091 punct .,remains
R719 T1104 T1105 advmod First,permit
R720 T1106 T1105 punct ", ",permit
R721 T1107 T1108 det the,density
R722 T1108 T1105 nsubj density,permit
R723 T1109 T1108 prep of,density
R724 T1110 T1111 amod chromosomal,markers
R725 T1111 T1109 pobj markers,of
R726 T1112 T1108 cc and,density
R727 T1113 T1108 conj number,density
R728 T1114 T1113 prep of,number
R729 T1115 T1116 amod recombinant,inbred
R730 T1116 T1117 amod inbred,RI
R731 T1117 T1119 amod RI,strains
R732 T1118 T1117 punct (,RI
R733 T1119 T1114 pobj strains,of
R734 T1120 T1119 punct ),strains
R735 T1121 T1113 acl used,number
R736 T1122 T1121 prep in,used
R737 T1123 T1124 det these,studies
R738 T1124 T1122 pobj studies,in
R739 T1125 T1124 amod earlier,studies
R740 T1126 T1105 aux did,permit
R741 T1127 T1105 neg not,permit
R742 T1128 T1129 det the,definition
R743 T1129 T1105 dobj definition,permit
R744 T1130 T1129 amod physical,definition
R745 T1131 T1129 prep of,definition
R746 T1132 T1133 det the,intervals
R747 T1133 T1131 pobj intervals,of
R748 T1134 T1133 acl containing,intervals
R749 T1135 T1136 det each,QTL
R750 T1136 T1134 dobj QTL,containing
R751 T1137 T1105 punct .,permit
R752 T1139 T1140 advmod Second,relied
R753 T1141 T1140 punct ", ",relied
R754 T1142 T1143 det these,attempts
R755 T1143 T1140 nsubj attempts,relied
R756 T1144 T1143 amod previous,attempts
R757 T1145 T1146 aux to,map
R758 T1146 T1143 acl map,attempts
R759 T1147 T1148 amod bitter,taste
R760 T1148 T1149 compound taste,QTLs
R761 T1149 T1146 dobj QTLs,map
R762 T1150 T1140 prep on,relied
R763 T1151 T1152 amod behavioral,assays
R764 T1152 T1150 pobj assays,on
R765 T1153 T1154 dep that,measured
R766 T1154 T1152 relcl measured,assays
R767 T1155 T1154 dobj consumption,measured
R768 T1156 T1140 punct ", ",relied
R769 T1157 T1140 cc and,relied
R770 T1158 T1140 conj were,relied
R771 T1159 T1158 advmod thus,were
R772 T1160 T1158 acomp susceptible,were
R773 T1161 T1160 prep to,susceptible
R774 T1162 T1161 pobj contributions,to
R775 T1163 T1162 prep of,contributions
R776 T1164 T1165 amod post-ingestive,effects
R777 T1165 T1163 pobj effects,of
R778 T1166 T1167 amod such,as
R779 T1167 T1165 prep as,effects
R780 T1168 T1167 pobj toxicity,as
R781 T1169 T1140 punct .,relied
R782 T1171 T1172 mark As,shown
R783 T1172 T1175 advcl shown,confound
R784 T1173 T1172 nsubj we,shown
R785 T1174 T1172 aux have,shown
R786 T1176 T1172 advmod previously,shown
R787 T1177 T1175 punct ", ",confound
R788 T1178 T1179 amod such,effects
R789 T1179 T1175 nsubj effects,confound
R790 T1180 T1175 aux can,confound
R791 T1181 T1182 det the,quantification
R792 T1182 T1175 dobj quantification,confound
R793 T1183 T1182 prep of,quantification
R794 T1184 T1185 amod bitter,taste
R795 T1185 T1186 compound taste,behaviors
R796 T1186 T1183 pobj behaviors,of
R797 T1187 T1188 punct [,29
R798 T1188 T1175 parataxis 29,confound
R799 T1189 T1188 punct ],29
R800 T1190 T1175 punct .,confound
R801 T1192 T1193 advmod Therefore,remain
R802 T1194 T1193 punct ", ",remain
R803 T1195 T1196 det the,relevance
R804 T1196 T1193 nsubj relevance,remain
R805 T1197 T1196 cc and,relevance
R806 T1198 T1197 punct /,and
R807 T1199 T1197 cc or,and
R808 T1200 T1196 conj contribution,relevance
R809 T1201 T1196 prep of,relevance
R810 T1202 T1203 det the,QTLs
R811 T1203 T1201 pobj QTLs,of
R812 T1204 T1203 amod aforementioned,QTLs
R813 T1205 T1196 prep to,relevance
R814 T1206 T1207 amod bitter,taste
R815 T1207 T1205 pobj taste,to
R816 T1208 T1193 acomp unclear,remain
R817 T1209 T1193 punct .,remain

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T652 8-31 SO_EXT:0000771 denotes quantitative trait loci
T653 33-36 SO_EXT:0000771 denotes QTL
T654 85-91 GO:0007631 denotes intake
T655 117-122 NCBITaxon:10088 denotes mouse
T656 143-150 CHEBI:15854 denotes quinine
T657 152-155 CHEBI:15854 denotes Qui
T658 169-182 CHEBI:27641 denotes cyclohexamide
T659 184-187 CHEBI:27641 denotes Cyx
T660 262-265 SO_EXT:0000771 denotes QTL
T661 273-278 NCBITaxon:10088 denotes mouse
T662 286-296 GO_SO_EXT:chromosome denotes chromosome
T663 321-327 CHEBI_SO_EXT:molecular_indicator_or_label_or_marker_or_tag denotes marker
T664 378-384 PR_EXT:000036337 denotes Tas2rs
T665 400-406 SO_EXT:0001026 denotes genome
T666 531-542 GO_SO_EXT:chromosome denotes chromosomal
T667 543-550 CHEBI_SO_EXT:molecular_indicator_or_label_or_marker_or_tag denotes markers
T668 565-576 GO_SO_EXT:sequence_rearrangement_process denotes recombinant
T669 699-702 SO_EXT:0000771 denotes QTL
T670 743-755 GO:0050913 denotes bitter taste
T671 756-760 SO_EXT:0000771 denotes QTLs
T672 771-781 GO_PATO_EXT:biological_behavior denotes behavioral
T673 803-814 GO:0007631 denotes consumption
T674 867-876 GO:0007631 denotes ingestive
T675 980-992 GO:0050913 denotes bitter taste
T676 993-1002 GO_PATO_EXT:biological_behavior denotes behaviors
T677 1076-1080 SO_EXT:0000771 denotes QTLs
T678 1084-1096 GO:0050913 denotes bitter taste

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T544 8-31 SO:0000771 denotes quantitative trait loci
T545 33-36 SO:0000771 denotes QTL
T546 85-91 GO:0007631 denotes intake
T547 117-122 NCBITaxon:10088 denotes mouse
T548 143-150 CHEBI:15854 denotes quinine
T549 152-155 CHEBI:15854 denotes Qui
T550 169-182 CHEBI:27641 denotes cyclohexamide
T551 184-187 CHEBI:27641 denotes Cyx
T552 262-265 SO:0000771 denotes QTL
T553 273-278 NCBITaxon:10088 denotes mouse
T554 378-384 PR:000036337 denotes Tas2rs
T555 400-406 SO:0001026 denotes genome
T556 699-702 SO:0000771 denotes QTL
T557 743-755 GO:0050913 denotes bitter taste
T558 756-760 SO:0000771 denotes QTLs
T559 803-814 GO:0007631 denotes consumption
T560 867-876 GO:0007631 denotes ingestive
T561 980-992 GO:0050913 denotes bitter taste
T562 1076-1080 SO:0000771 denotes QTLs
T563 1084-1096 GO:0050913 denotes bitter taste