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PMC:1181811 / 10955-11909 JSONTXT

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craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T1860 821-826 NCBITaxon:10088 denotes mouse
T1859 759-762 SO:0000771 denotes QTL
T1858 738-741 SO:0000771 denotes QTL
T1857 599-604 GO:0050909 denotes taste
T1856 556-560 NCBITaxon:10088 denotes mice
T1855 154-157 SO:0000771 denotes QTL
T1854 23-24 GO:0050909 denotes s
T1853 17-20 SO:0000771 denotes QTL
T1852 0-1 SO:0000771 denotes T

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T1912 821-826 NCBITaxon:10088 denotes mouse
T1911 827-837 GO_SO_EXT:chromosomal_part_or_position_or_region_or_site denotes chromosome
T1910 810-820 _FRAGMENT denotes portion of
T1909 759-762 SO_EXT:0000771 denotes QTL
T1908 738-741 SO_EXT:0000771 denotes QTL
T1907 660-668 SO_EXT:genotype_or_entity_with_genotype denotes genotype
T1906 624-632 SO_EXT:genotype_or_entity_with_genotype denotes genotype
T1905 599-604 GO:0050909 denotes taste
T1904 556-560 NCBITaxon:10088 denotes mice
T1903 478-487 SO_EXT:genotype_or_entity_with_genotype denotes genotypes
T1902 400-406 CHEBI_SO_EXT:molecular_indicator_or_label_or_marker_or_tag denotes marker
T1901 241-254 GO_SO_EXT:sequence_rearrangement_process denotes recombination
T1900 172-178 CHEBI_SO_EXT:molecular_indicator_or_label_or_marker_or_tag denotes marker
T1899 154-157 SO_EXT:0000771 denotes QTL
T1898 99-106 CHEBI_SO_EXT:molecular_indicator_or_label_or_marker_or_tag denotes markers
T1897 44-50 CHEBI_SO_EXT:molecular_indicator_or_label_or_marker_or_tag denotes marker
T1896 23-24 GO:0050909 denotes s
T1895 17-20 SO_EXT:0000771 denotes QTL
T1894 5-14 GO_SO_EXT:chromosome denotes hromosome
T1893 1-3 GO_SO_EXT:chromosome denotes he
T1892 0-1 SO_EXT:0000771 denotes T
R1370 T1911 T1910 _lexicallyChainedTo chromosome,portion of

craft-sa-dev

Id Subject Object Predicate Lexical cue
T2296 953-954 . denotes .
T2295 945-953 NN denotes D6Mit374
T2294 941-944 CC denotes and
T2293 933-940 NN denotes D6Mit61
T2292 925-932 IN denotes between
T2291 918-924 NN denotes region
T2290 914-917 DT denotes the
T2289 911-913 IN denotes to
T2288 893-899 RB denotes likely
T2287 888-892 RBS denotes most
T2286 900-910 VBN denotes restricted
T2285 885-887 VBZ denotes is
T2284 881-884 CC denotes but
T2283 879-881 , denotes ,
T2282 871-879 NN denotes D6Mit374
T2281 867-870 CC denotes and
T2280 858-866 NN denotes D6Mit254
T2279 850-857 IN denotes between
T2278 845-849 VBZ denotes lies
T2277 840-844 WDT denotes that
T2276 838-839 CD denotes 6
T2275 827-837 NN denotes chromosome
T2274 821-826 NN denotes mouse
T2273 818-820 IN denotes of
T2272 810-817 NN denotes portion
T2271 805-809 DT denotes that
T2270 802-804 IN denotes as
T2269 779-793 RB denotes conservatively
T2268 776-778 VB denotes be
T2267 772-775 MD denotes can
T2266 759-762 NN denotes QTL
T2265 763-771 NN denotes interval
T2264 754-758 DT denotes this
T2263 752-754 , denotes ,
T2262 794-801 VBN denotes defined
T2261 743-752 RB denotes Therefore
T2260 742-954 sentence denotes Therefore, this QTL interval can be conservatively defined as that portion of mouse chromosome 6 that lies between D6Mit254 and D6Mit374, but is most likely restricted to the region between D6Mit61 and D6Mit374.
T2259 741-742 . denotes .
T2258 733-737 NN denotes QHCl
T2257 738-741 NN denotes QTL
T2256 729-732 DT denotes the
T2255 726-728 IN denotes to
T2254 717-725 JJ denotes unlinked
T2253 706-713 NN denotes D6Mit61
T2252 714-716 VBZ denotes is
T2251 701-705 IN denotes that
T2250 690-700 VBG denotes indicating
T2249 688-690 , denotes ,
T2248 687-688 -RRB- denotes ]
T2247 684-685 , denotes ,
T2246 682-684 CD denotes 39
T2245 685-687 CD denotes 40
T2244 681-682 -LRB- denotes [
T2243 673-680 NN denotes D6Mit61
T2242 669-672 IN denotes for
T2241 657-659 NN denotes B6
T2158 255-260 NN denotes event
T2157 231-236 RBS denotes least
T2156 237-240 CD denotes one
T2155 228-230 RB denotes at
T2154 219-224 EX denotes there
T2153 212-218 VBN denotes tested
T2152 203-205 JJ denotes RI
T2151 200-202 CD denotes 17
T2150 206-211 NNS denotes lines
T2149 196-199 DT denotes the
T2148 225-227 VBZ denotes is
T2147 189-195 IN denotes Across
T2146 188-376 sentence denotes Across the 17 RI lines tested there is at least one recombination event between D6Mit13 and either D6Mit254 (and D6Mit194, the physical position of which is not well defined) or D6Mit374.
T2145 187-188 . denotes .
T2144 179-187 NN denotes D6Mit374
T2143 172-178 NN denotes marker
T2142 165-171 JJ denotes distal
T2141 162-164 VBZ denotes is
T2140 159-161 IN denotes as
T2139 157-159 , denotes ,
T2138 149-153 NN denotes QHCl
T2137 154-157 NN denotes QTL
T2136 145-148 DT denotes the
T2135 142-144 IN denotes to
T2134 133-141 JJ denotes unlinked
T2133 120-128 NN denotes D6Mit194
T2132 116-119 CC denotes and
T2131 129-132 VBP denotes are
T2130 99-106 NNS denotes markers
T2129 90-98 JJ denotes proximal
T2128 107-115 NN denotes D6Mit254
T2127 81-89 JJ denotes Adjacent
T2126 80-188 sentence denotes Adjacent proximal markers D6Mit254 and D6Mit194 are unlinked to the QHCl QTL, as is distal marker D6Mit374.
T2125 79-80 . denotes .
T2124 78-79 -RRB- denotes )
T2123 77-78 CD denotes 3
T2122 68-70 , denotes ,
T2121 67-68 CD denotes 2
T2120 61-66 NN denotes Table
T2118 60-61 -LRB- denotes (
T2240 660-668 NN denotes genotype
T2239 655-656 DT denotes a
T2238 650-654 VBP denotes have
T2237 646-649 CC denotes but
T2236 644-646 , denotes ,
T2235 637-644 NN denotes D6Mit13
T2234 633-636 IN denotes for
T2233 624-632 NN denotes genotype
T2232 621-623 NN denotes D2
T2231 617-620 CC denotes and
T2230 615-616 -RRB- denotes )
T2229 613-615 CD denotes 1C
T2228 606-612 NN denotes Figure
T2227 605-606 -LRB- denotes (
T2226 599-604 NN denotes taste
T2225 594-598 NN denotes QHCl
T2224 590-593 IN denotes for
T2223 577-579 NN denotes D2
T2222 571-576 JJ denotes clear
T2221 580-589 NN denotes phenotype
T2220 569-570 DT denotes a
T2219 561-568 VBP denotes display
T2218 553-555 JJ denotes RI
T2217 550-552 CD denotes 34
T2216 549-550 HYPH denotes -
T2215 547-549 NN denotes Ty
T2214 546-547 HYPH denotes /
T2213 556-560 NNS denotes mice
T2212 543-546 NN denotes BXD
T2211 542-742 sentence denotes BXD/Ty-34 RI mice display a clear D2 phenotype for QHCl taste (Figure 1C) and D2 genotype for D6Mit13, but have a B6 genotype for D6Mit61 [39,40], indicating that D6Mit61 is unlinked to the QHCl QTL.
T2210 541-542 . denotes .
T2209 521-528 NNP denotes Jackson
T2208 529-541 NNP denotes Laboratories
T2207 517-520 DT denotes the
T2206 514-516 IN denotes by
T2205 505-513 VBN denotes reported
T2204 495-498 NN denotes BXD
T2203 499-504 NNS denotes lines
T2202 491-494 DT denotes the
T2201 488-490 IN denotes of
T2200 478-487 NNS denotes genotypes
T2199 473-477 IN denotes from
T2198 458-461 VBD denotes was
T2197 456-458 , denotes ,
T2196 449-456 NN denotes D6Mit13
T2195 445-448 CC denotes and
T2194 436-444 NN denotes D6Mit194
T2193 428-435 IN denotes between
T2192 423-427 VBZ denotes lies
T2191 417-422 WDT denotes which
T2190 415-417 , denotes ,
T2189 408-415 NN denotes D6Mit61
T2188 406-408 , denotes ,
T2187 462-472 VBN denotes identified
T2186 391-399 JJ denotes proximal
T2185 380-390 JJ denotes additional
T2184 400-406 NN denotes marker
T2183 377-379 DT denotes An
T2182 376-542 sentence denotes An additional proximal marker, D6Mit61, which lies between D6Mit194 and D6Mit13, was identified from genotypes of the BXD lines reported by the Jackson Laboratories.
T2181 375-376 . denotes .
T2180 367-375 NN denotes D6Mit374
T2179 364-366 CC denotes or
T2178 362-363 -RRB- denotes )
T2177 355-362 JJ denotes defined
T2176 350-354 RB denotes well
T2175 346-349 RB denotes not
T2174 337-342 WDT denotes which
T2173 334-336 IN denotes of
T2172 343-345 VBZ denotes is
T2171 316-324 JJ denotes physical
T2170 325-333 NN denotes position
T2169 312-315 DT denotes the
T2168 310-312 , denotes ,
T2167 302-310 NN denotes D6Mit194
T2166 298-301 CC denotes and
T2165 297-298 -LRB- denotes (
T2164 288-296 NN denotes D6Mit254
T2163 281-287 CC denotes either
T2162 277-280 CC denotes and
T2161 269-276 NN denotes D6Mit13
T2160 261-268 IN denotes between
T2159 241-254 NN denotes recombination
T2109 27-28 NN denotes n
T2108 27-28 sentence denotes n
T2107 26-27 JJ denotes i
T2106 26-27 sentence denotes i
T2105 25-26 NN denotes l
T2104 23-24 NN denotes s
T2103 22-23 VBG denotes a
T2102 21-22 JJ denotes w
T2101 17-20 NN denotes QTL
T2100 15-16 CD denotes 6
T2099 5-14 NN denotes hromosome
T2098 4-5 JJ denotes c
T2097 4-26 sentence denotes chromosome 6 QTL was l
T2096 1-3 NN denotes he
T2095 0-1 NN denotes T
T2094 0-4 sentence denotes The
T2119 70-76 NN denotes Figure
T2117 52-59 NN denotes D6Mit13
T2116 50-52 , denotes ,
T2115 37-43 JJ denotes single
T2114 44-50 NN denotes marker
T2113 35-36 DT denotes a
T2112 32-34 IN denotes to
T2111 28-31 VBN denotes ked
T2110 28-80 sentence denotes ked to a single marker, D6Mit13 (Table 2, Figure 3).
R1513 T2113 T2114 det a,marker
R1514 T2114 T2112 pobj marker,to
R1515 T2115 T2114 amod single,marker
R1516 T2116 T2114 punct ", ",marker
R1517 T2117 T2114 appos D6Mit13,marker
R1518 T2118 T2119 punct (,Figure
R1519 T2119 T2111 parataxis Figure,ked
R1520 T2120 T2119 dep Table,Figure
R1521 T2121 T2120 nummod 2,Table
R1522 T2122 T2119 punct ", ",Figure
R1523 T2123 T2119 nummod 3,Figure
R1524 T2124 T2119 punct ),Figure
R1525 T2125 T2111 punct .,ked
R1526 T2127 T2128 amod Adjacent,D6Mit254
R1527 T2128 T2131 nsubj D6Mit254,are
R1528 T2129 T2128 amod proximal,D6Mit254
R1529 T2130 T2128 compound markers,D6Mit254
R1530 T2132 T2128 cc and,D6Mit254
R1531 T2133 T2128 conj D6Mit194,D6Mit254
R1532 T2134 T2131 acomp unlinked,are
R1533 T2135 T2134 prep to,unlinked
R1534 T2136 T2137 det the,QTL
R1535 T2137 T2135 pobj QTL,to
R1536 T2138 T2137 compound QHCl,QTL
R1537 T2139 T2131 punct ", ",are
R1538 T2140 T2141 mark as,is
R1539 T2141 T2131 advcl is,are
R1540 T2142 T2143 amod distal,marker
R1541 T2143 T2144 compound marker,D6Mit374
R1542 T2144 T2141 nsubj D6Mit374,is
R1543 T2145 T2131 punct .,are
R1544 T2147 T2148 prep Across,is
R1545 T2149 T2150 det the,lines
R1546 T2150 T2147 pobj lines,Across
R1547 T2151 T2150 nummod 17,lines
R1548 T2152 T2150 amod RI,lines
R1549 T2153 T2150 acl tested,lines
R1550 T2154 T2148 expl there,is
R1551 T2155 T2156 advmod at,one
R1552 T2156 T2158 nummod one,event
R1553 T2157 T2156 advmod least,one
R1554 T2158 T2148 attr event,is
R1555 T2159 T2158 compound recombination,event
R1556 T2160 T2158 prep between,event
R1557 T2161 T2160 pobj D6Mit13,between
R1558 T2162 T2161 cc and,D6Mit13
R1559 T2163 T2164 preconj either,D6Mit254
R1560 T2164 T2161 conj D6Mit254,D6Mit13
R1561 T2165 T2164 punct (,D6Mit254
R1562 T2166 T2164 cc and,D6Mit254
R1563 T2167 T2164 conj D6Mit194,D6Mit254
R1564 T2168 T2167 punct ", ",D6Mit194
R1565 T2169 T2170 det the,position
R1566 T2170 T2172 dep position,is
R1567 T2171 T2170 amod physical,position
R1568 T2172 T2167 relcl is,D6Mit194
R1569 T2173 T2170 prep of,position
R1570 T2174 T2173 pobj which,of
R1571 T2175 T2172 neg not,is
R1572 T2176 T2177 advmod well,defined
R1573 T2177 T2172 acomp defined,is
R1574 T2178 T2164 punct ),D6Mit254
R1575 T2179 T2164 cc or,D6Mit254
R1576 T2180 T2164 conj D6Mit374,D6Mit254
R1577 T2181 T2148 punct .,is
R1578 T2183 T2184 det An,marker
R1579 T2184 T2187 nsubjpass marker,identified
R1580 T2185 T2184 amod additional,marker
R1581 T2186 T2184 amod proximal,marker
R1582 T2188 T2184 punct ", ",marker
R1583 T2189 T2184 appos D6Mit61,marker
R1584 T2190 T2184 punct ", ",marker
R1585 T2191 T2192 dep which,lies
R1586 T2192 T2184 relcl lies,marker
R1587 T2193 T2192 prep between,lies
R1588 T2194 T2193 pobj D6Mit194,between
R1589 T2195 T2194 cc and,D6Mit194
R1590 T2196 T2194 conj D6Mit13,D6Mit194
R1591 T2197 T2187 punct ", ",identified
R1592 T2198 T2187 auxpass was,identified
R1593 T2199 T2187 prep from,identified
R1594 T2200 T2199 pobj genotypes,from
R1595 T2201 T2200 prep of,genotypes
R1596 T2202 T2203 det the,lines
R1597 T2203 T2201 pobj lines,of
R1598 T2204 T2203 compound BXD,lines
R1599 T2205 T2200 acl reported,genotypes
R1600 T2206 T2205 agent by,reported
R1601 T2207 T2208 det the,Laboratories
R1602 T2208 T2206 pobj Laboratories,by
R1603 T2209 T2208 compound Jackson,Laboratories
R1604 T2210 T2187 punct .,identified
R1605 T2212 T2213 nmod BXD,mice
R1606 T2213 T2219 nsubj mice,display
R1607 T2214 T2212 punct /,BXD
R1608 T2215 T2212 appos Ty,BXD
R1609 T2216 T2215 punct -,Ty
R1610 T2217 T2215 nummod 34,Ty
R1611 T2218 T2213 amod RI,mice
R1612 T2220 T2221 det a,phenotype
R1613 T2221 T2219 dobj phenotype,display
R1614 T2222 T2221 amod clear,phenotype
R1615 T2223 T2221 compound D2,phenotype
R1616 T2224 T2221 prep for,phenotype
R1617 T2225 T2226 compound QHCl,taste
R1618 T2226 T2224 pobj taste,for
R1619 T2227 T2228 punct (,Figure
R1620 T2228 T2221 parataxis Figure,phenotype
R1621 T2229 T2228 nummod 1C,Figure
R1622 T2230 T2228 punct ),Figure
R1623 T2231 T2221 cc and,phenotype
R1624 T2232 T2233 compound D2,genotype
R1625 T2233 T2221 conj genotype,phenotype
R1626 T2234 T2233 prep for,genotype
R1627 T2235 T2234 pobj D6Mit13,for
R1628 T2236 T2219 punct ", ",display
R1629 T2237 T2219 cc but,display
R1630 T2238 T2219 conj have,display
R1631 T2239 T2240 det a,genotype
R1632 T2240 T2238 dobj genotype,have
R1633 T2241 T2240 compound B6,genotype
R1634 T2242 T2240 prep for,genotype
R1635 T2243 T2242 pobj D6Mit61,for
R1636 T2244 T2245 punct [,40
R1637 T2245 T2240 parataxis 40,genotype
R1638 T2246 T2245 nummod 39,40
R1639 T2247 T2245 punct ",",40
R1640 T2248 T2245 punct ],40
R1641 T2249 T2238 punct ", ",have
R1642 T2250 T2238 advcl indicating,have
R1643 T2251 T2252 mark that,is
R1644 T2252 T2250 ccomp is,indicating
R1645 T2253 T2252 nsubj D6Mit61,is
R1646 T2254 T2252 acomp unlinked,is
R1647 T2255 T2254 prep to,unlinked
R1648 T2256 T2257 det the,QTL
R1649 T2257 T2255 pobj QTL,to
R1650 T2258 T2257 compound QHCl,QTL
R1651 T2259 T2219 punct .,display
R1652 T2261 T2262 advmod Therefore,defined
R1653 T2263 T2262 punct ", ",defined
R1654 T2264 T2265 det this,interval
R1655 T2265 T2262 nsubjpass interval,defined
R1656 T2266 T2265 compound QTL,interval
R1657 T2267 T2262 aux can,defined
R1658 T2268 T2262 auxpass be,defined
R1659 T2269 T2262 advmod conservatively,defined
R1660 T2270 T2262 prep as,defined
R1661 T2271 T2272 det that,portion
R1662 T2272 T2270 pobj portion,as
R1663 T2273 T2272 prep of,portion
R1664 T2274 T2275 compound mouse,chromosome
R1665 T2275 T2273 pobj chromosome,of
R1666 T2276 T2275 nummod 6,chromosome
R1667 T2277 T2278 dep that,lies
R1668 T2278 T2272 relcl lies,portion
R1669 T2279 T2278 prep between,lies
R1670 T2280 T2279 pobj D6Mit254,between
R1671 T2281 T2280 cc and,D6Mit254
R1672 T2282 T2280 conj D6Mit374,D6Mit254
R1673 T2283 T2262 punct ", ",defined
R1674 T2284 T2262 cc but,defined
R1675 T2285 T2286 auxpass is,restricted
R1676 T2286 T2262 conj restricted,defined
R1677 T2287 T2288 advmod most,likely
R1678 T2288 T2286 advmod likely,restricted
R1679 T2289 T2286 prep to,restricted
R1680 T2290 T2291 det the,region
R1681 T2291 T2289 pobj region,to
R1682 T2292 T2291 prep between,region
R1683 T2293 T2292 pobj D6Mit61,between
R1684 T2294 T2293 cc and,D6Mit61
R1685 T2295 T2293 conj D6Mit374,D6Mit61
R1686 T2296 T2262 punct .,defined
R1511 T2100 T2099 nummod 6,hromosome
R1512 T2112 T2111 prep to,ked