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PMC:1166548 / 24176-25032 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T5918 855-856 . denotes .
T5917 854-855 -RRB- denotes ]
T5916 853-854 -RRB- denotes )
T5915 852-853 SYM denotes -
T5914 851-852 HYPH denotes /
T5913 850-851 SYM denotes -
T5912 849-850 -LRB- denotes (
T5911 845-849 NN denotes Cftr
T5910 844-845 -LRB- denotes [
T5909 839-843 JJ denotes null
T5908 828-838 JJ denotes homozygous
T5907 823-827 NN denotes Cftr
T5906 820-822 CC denotes or
T5905 818-819 -RRB- denotes ]
T5904 817-818 -RRB- denotes )
T5903 816-817 SYM denotes +
T5902 815-816 HYPH denotes /
T5901 814-815 SYM denotes +
T5900 813-814 -LRB- denotes (
T5899 809-813 NN denotes Cftr
T5898 808-809 -LRB- denotes [
T5897 798-802 JJ denotes wild
T5896 787-797 JJ denotes homozygous
T5895 782-786 NN denotes Cftr
T5894 803-807 NN denotes type
T5893 775-781 CC denotes either
T5892 771-774 CC denotes and
T5891 755-762 NN denotes gastrin
T5890 763-770 NNS denotes alleles
T5889 750-754 CC denotes both
T5888 746-749 IN denotes for
T5887 741-745 NN denotes type
T5886 736-740 JJ denotes wild
T5885 731-735 NNS denotes mice
T5884 724-730 VB denotes obtain
T5883 721-723 TO denotes to
T5882 711-715 VBD denotes were
T5881 716-720 VBN denotes bred
T5880 706-710 NNS denotes mice
T5879 700-705 DT denotes These
T5878 699-856 sentence denotes These mice were bred to obtain mice wild type for both gastrin alleles and either Cftr homozygous wild type [Cftr(+/+)] or Cftr homozygous null [Cftr(-/-)].
T5877 698-699 . denotes .
T5876 697-698 -RRB- denotes )
T5875 692-697 RB denotes below
T5874 688-691 VB denotes see
T5873 687-688 -LRB- denotes (
T5872 683-686 CD denotes 129
T5871 681-682 NN denotes %
T5870 680-681 CD denotes 5
T5869 676-679 CC denotes and
T5868 673-675 NN denotes B6
T5867 671-672 NN denotes %
T5866 669-671 CD denotes 95
T5865 663-668 RB denotes about
T5864 653-657 NNS denotes mice
T5863 649-652 DT denotes the
T5862 658-662 VBD denotes were
T5861 644-648 IN denotes that
T5860 631-636 NN denotes point
T5859 626-630 DT denotes this
T5858 623-625 IN denotes at
T5857 637-643 VBD denotes showed
T5856 611-617 NN denotes genome
T5855 618-622 NN denotes scan
T5854 609-610 DT denotes A
T5853 608-699 sentence denotes A genome scan at this point showed that the mice were about 95% B6 and 5% 129 (see below).
T5852 607-608 . denotes .
T5851 594-596 NN denotes B6
T5850 597-607 NN denotes background
T5849 590-593 DT denotes the
T5848 587-589 IN denotes on
T5847 578-586 JJ denotes congenic
T5846 571-572 -RRB- denotes )
T5845 570-571 SYM denotes -
T5844 569-570 HYPH denotes /
T5843 568-569 SYM denotes +
T5842 567-568 -LRB- denotes (
T5841 573-577 NNS denotes mice
T5840 563-567 NN denotes Cftr
T5839 558-562 IN denotes with
T5838 546-557 NNS denotes generations
T5837 542-545 CD denotes six
T5836 538-541 IN denotes for
T5835 525-529 RB denotes then
T5834 520-524 VBD denotes were
T5833 530-537 VBN denotes crossed
T5832 513-514 -RRB- denotes )
T5831 512-513 SYM denotes -
T5830 511-512 HYPH denotes /
T5829 510-511 SYM denotes +
T5828 509-510 -LRB- denotes (
T5827 502-509 NN denotes gastrin
T5826 515-519 NNS denotes mice
T5825 498-501 DT denotes The
T5824 497-608 sentence denotes The gastrin(+/-) mice were then crossed for six generations with Cftr(+/-) mice congenic on the B6 background.
T5823 496-497 . denotes .
T5822 483-485 NN denotes B6
T5821 486-496 NN denotes background
T5820 479-482 DT denotes the
T5819 474-478 IN denotes onto
T5818 462-473 NNS denotes generations
T5817 456-461 CD denotes eight
T5816 452-455 IN denotes for
T5815 442-446 VBD denotes were
T5814 440-441 -RRB- denotes ]
T5813 438-440 CD denotes 51
T5812 437-438 -LRB- denotes [
T5811 422-425 CD denotes 129
T5810 421-422 HYPH denotes /
T5809 419-421 NN denotes B6
T5808 413-418 JJ denotes mixed
T5807 426-436 NN denotes background
T5806 411-412 DT denotes a
T5805 408-410 IN denotes on
T5804 395-402 NN denotes gastrin
T5803 403-407 NN denotes gene
T5802 391-394 DT denotes the
T5801 388-390 IN denotes of
T5800 370-378 VBN denotes targeted
T5799 379-387 NN denotes mutation
T5798 368-369 DT denotes a
T5797 359-367 VBG denotes carrying
T5796 447-451 VBN denotes bred
T5795 354-358 NNS denotes Mice
T5794 353-497 sentence denotes Mice carrying a targeted mutation of the gastrin gene on a mixed B6/129 background [51] were bred for eight generations onto the B6 background.
T5793 352-353 . denotes .
T5792 345-352 VBZ denotes follows
T5791 342-344 IN denotes as
T5790 340-341 -RRB- denotes ]
T5789 338-340 CD denotes 20
T5788 337-338 -LRB- denotes [
T5787 321-330 VBN denotes published
T5786 312-320 RB denotes recently
T5785 331-336 NN denotes study
T5784 310-311 DT denotes a
T5783 307-309 IN denotes of
T5782 302-306 NN denotes part
T5781 299-301 IN denotes as
T5780 271-276 JJ denotes mixed
T5779 277-287 NN denotes background
T5778 267-270 DT denotes the
T5777 264-266 IN denotes on
T5776 288-298 VBD denotes originated
T5775 259-263 NNS denotes mice
T5774 255-258 DT denotes The
T5773 254-353 sentence denotes The mice on the mixed background originated as part of a recently published study [20] as follows.
T5772 253-254 . denotes .
T5771 252-253 -RRB- denotes )
T5770 249-252 CD denotes 129
T5769 248-249 -LRB- denotes (
T5768 244-245 HYPH denotes /
T5767 241-244 CD denotes 129
T5766 245-247 NN denotes Sv
T5765 239-240 NN denotes %
T5764 238-239 CD denotes 5
T5763 234-237 CC denotes and
T5762 231-233 NN denotes B6
T5761 229-230 NN denotes %
T5760 227-229 CD denotes 95
T5759 221-226 RB denotes about
T5758 218-220 IN denotes of
T5757 201-206 JJ denotes mixed
T5756 207-217 NN denotes background
T5755 199-200 DT denotes a
T5754 196-198 IN denotes on
T5753 192-195 VBD denotes was
T5752 180-185 JJ denotes other
T5751 186-191 NN denotes group
T5750 176-179 DT denotes The
T5749 175-254 sentence denotes The other group was on a mixed background of about 95% B6 and 5% 129/Sv (129).
T5748 174-175 . denotes .
T5747 173-174 -RRB- denotes ]
T5746 171-173 CD denotes 21
T5745 170-171 -LRB- denotes [
T5744 149-159 RB denotes previously
T5743 160-169 VBN denotes described
T5742 146-148 IN denotes as
T5741 144-146 , denotes ,
T5740 132-133 -RRB- denotes )
T5739 130-132 NN denotes B6
T5738 129-130 -LRB- denotes (
T5737 127-128 CD denotes 6
T5736 126-127 HYPH denotes /
T5735 121-126 NN denotes C57Bl
T5734 134-144 NN denotes background
T5733 117-120 DT denotes the
T5732 114-116 IN denotes on
T5731 105-113 JJ denotes congenic
T5730 101-104 VBD denotes was
T5729 95-100 NN denotes group
T5728 91-94 CD denotes One
T5727 90-175 sentence denotes One group was congenic on the C57Bl/6 (B6) background, as previously described [21].
T5726 89-90 . denotes .
T5725 84-89 NN denotes study
T5724 79-83 DT denotes this
T5723 76-78 IN denotes in
T5722 66-70 VBD denotes were
T5721 46-53 JJ denotes genetic
T5720 36-45 JJ denotes different
T5719 54-65 NNS denotes backgrounds
T5718 32-35 CD denotes two
T5717 29-31 IN denotes on
T5716 71-75 VBN denotes used
T5715 19-23 JJ denotes null
T5714 14-18 NN denotes Cftr
T5713 10-13 CC denotes and
T5712 24-28 NNS denotes mice
T5711 5-9 NN denotes type
T5710 0-4 JJ denotes Wild
R3726 T5710 T5711 amod Wild,type
R3727 T5711 T5712 nmod type,mice
R3728 T5712 T5716 nsubjpass mice,used
R3729 T5713 T5711 cc and,type
R3730 T5714 T5715 npadvmod Cftr,null
R3731 T5715 T5711 conj null,type
R3732 T5717 T5712 prep on,mice
R3733 T5718 T5719 nummod two,backgrounds
R3734 T5719 T5717 pobj backgrounds,on
R3735 T5720 T5719 amod different,backgrounds
R3736 T5721 T5719 amod genetic,backgrounds
R3737 T5722 T5716 auxpass were,used
R3738 T5723 T5716 prep in,used
R3739 T5724 T5725 det this,study
R3740 T5725 T5723 pobj study,in
R3741 T5726 T5716 punct .,used
R3742 T5728 T5729 nummod One,group
R3743 T5729 T5730 nsubj group,was
R3744 T5731 T5730 acomp congenic,was
R3745 T5732 T5731 prep on,congenic
R3746 T5733 T5734 det the,background
R3747 T5734 T5732 pobj background,on
R3748 T5735 T5734 nmod C57Bl,background
R3749 T5736 T5735 punct /,C57Bl
R3750 T5737 T5735 nummod 6,C57Bl
R3751 T5738 T5735 punct (,C57Bl
R3752 T5739 T5735 appos B6,C57Bl
R3753 T5740 T5734 punct ),background
R3754 T5741 T5730 punct ", ",was
R3755 T5742 T5743 mark as,described
R3756 T5743 T5730 advcl described,was
R3757 T5744 T5743 advmod previously,described
R3758 T5745 T5746 punct [,21
R3759 T5746 T5730 parataxis 21,was
R3760 T5747 T5746 punct ],21
R3761 T5748 T5730 punct .,was
R3762 T5750 T5751 det The,group
R3763 T5751 T5753 nsubj group,was
R3764 T5752 T5751 amod other,group
R3765 T5754 T5753 prep on,was
R3766 T5755 T5756 det a,background
R3767 T5756 T5754 pobj background,on
R3768 T5757 T5756 amod mixed,background
R3769 T5758 T5756 prep of,background
R3770 T5759 T5760 advmod about,95
R3771 T5760 T5761 nummod 95,%
R3772 T5761 T5762 compound %,B6
R3773 T5762 T5758 pobj B6,of
R3774 T5763 T5762 cc and,B6
R3775 T5764 T5765 nummod 5,%
R3776 T5765 T5766 nmod %,Sv
R3777 T5766 T5762 conj Sv,B6
R3778 T5767 T5766 nummod 129,Sv
R3779 T5768 T5766 punct /,Sv
R3780 T5769 T5770 punct (,129
R3781 T5770 T5753 parataxis 129,was
R3782 T5771 T5770 punct ),129
R3783 T5772 T5753 punct .,was
R3784 T5774 T5775 det The,mice
R3785 T5775 T5776 nsubj mice,originated
R3786 T5777 T5775 prep on,mice
R3787 T5778 T5779 det the,background
R3788 T5779 T5777 pobj background,on
R3789 T5780 T5779 amod mixed,background
R3790 T5781 T5776 prep as,originated
R3791 T5782 T5781 pobj part,as
R3792 T5783 T5782 prep of,part
R3793 T5784 T5785 det a,study
R3794 T5785 T5783 pobj study,of
R3795 T5786 T5787 advmod recently,published
R3796 T5787 T5785 amod published,study
R3797 T5788 T5789 punct [,20
R3798 T5789 T5785 parataxis 20,study
R3799 T5790 T5789 punct ],20
R3800 T5791 T5792 mark as,follows
R3801 T5792 T5776 advcl follows,originated
R3802 T5793 T5776 punct .,originated
R3803 T5795 T5796 nsubjpass Mice,bred
R3804 T5797 T5795 acl carrying,Mice
R3805 T5798 T5799 det a,mutation
R3806 T5799 T5797 dobj mutation,carrying
R3807 T5800 T5799 amod targeted,mutation
R3808 T5801 T5799 prep of,mutation
R3809 T5802 T5803 det the,gene
R3810 T5803 T5801 pobj gene,of
R3811 T5804 T5803 compound gastrin,gene
R3812 T5805 T5797 prep on,carrying
R3813 T5806 T5807 det a,background
R3814 T5807 T5805 pobj background,on
R3815 T5808 T5807 amod mixed,background
R3816 T5809 T5807 nmod B6,background
R3817 T5810 T5809 punct /,B6
R3818 T5811 T5809 nummod 129,B6
R3819 T5812 T5813 punct [,51
R3820 T5813 T5797 parataxis 51,carrying
R3821 T5814 T5813 punct ],51
R3822 T5815 T5796 auxpass were,bred
R3823 T5816 T5796 prep for,bred
R3824 T5817 T5818 nummod eight,generations
R3825 T5818 T5816 pobj generations,for
R3826 T5819 T5796 prep onto,bred
R3827 T5820 T5821 det the,background
R3828 T5821 T5819 pobj background,onto
R3829 T5822 T5821 compound B6,background
R3830 T5823 T5796 punct .,bred
R3831 T5825 T5826 det The,mice
R3832 T5826 T5833 nsubjpass mice,crossed
R3833 T5827 T5826 nmod gastrin,mice
R3834 T5828 T5827 punct (,gastrin
R3835 T5829 T5827 punct +,gastrin
R3836 T5830 T5827 punct /,gastrin
R3837 T5831 T5827 punct -,gastrin
R3838 T5832 T5827 punct ),gastrin
R3839 T5834 T5833 auxpass were,crossed
R3840 T5835 T5833 advmod then,crossed
R3841 T5836 T5833 prep for,crossed
R3842 T5837 T5838 nummod six,generations
R3843 T5838 T5836 pobj generations,for
R3844 T5839 T5833 prep with,crossed
R3845 T5840 T5841 nmod Cftr,mice
R3846 T5841 T5839 pobj mice,with
R3847 T5842 T5840 punct (,Cftr
R3848 T5843 T5840 punct +,Cftr
R3849 T5844 T5840 punct /,Cftr
R3850 T5845 T5840 punct -,Cftr
R3851 T5846 T5840 punct ),Cftr
R3852 T5847 T5841 amod congenic,mice
R3853 T5848 T5847 prep on,congenic
R3854 T5849 T5850 det the,background
R3855 T5850 T5848 pobj background,on
R3856 T5851 T5850 compound B6,background
R3857 T5852 T5833 punct .,crossed
R3858 T5854 T5855 det A,scan
R3859 T5855 T5857 nsubj scan,showed
R3860 T5856 T5855 compound genome,scan
R3861 T5858 T5857 prep at,showed
R3862 T5859 T5860 det this,point
R3863 T5860 T5858 pobj point,at
R3864 T5861 T5862 mark that,were
R3865 T5862 T5857 ccomp were,showed
R3866 T5863 T5864 det the,mice
R3867 T5864 T5862 nsubj mice,were
R3868 T5865 T5866 advmod about,95
R3869 T5866 T5867 nummod 95,%
R3870 T5867 T5868 compound %,B6
R3871 T5868 T5862 attr B6,were
R3872 T5869 T5868 cc and,B6
R3873 T5870 T5871 nummod 5,%
R3874 T5871 T5868 conj %,B6
R3875 T5872 T5871 nummod 129,%
R3876 T5873 T5874 punct (,see
R3877 T5874 T5857 parataxis see,showed
R3878 T5875 T5874 advmod below,see
R3879 T5876 T5874 punct ),see
R3880 T5877 T5857 punct .,showed
R3881 T5879 T5880 det These,mice
R3882 T5880 T5881 nsubjpass mice,bred
R3883 T5882 T5881 auxpass were,bred
R3884 T5883 T5884 aux to,obtain
R3885 T5884 T5881 advcl obtain,bred
R3886 T5885 T5884 dobj mice,obtain
R3887 T5886 T5887 amod wild,type
R3888 T5887 T5885 amod type,mice
R3889 T5888 T5887 prep for,type
R3890 T5889 T5890 preconj both,alleles
R3891 T5890 T5888 pobj alleles,for
R3892 T5891 T5890 compound gastrin,alleles
R3893 T5892 T5890 cc and,alleles
R3894 T5893 T5894 preconj either,type
R3895 T5894 T5890 conj type,alleles
R3896 T5895 T5894 nmod Cftr,type
R3897 T5896 T5894 amod homozygous,type
R3898 T5897 T5894 amod wild,type
R3899 T5898 T5894 punct [,type
R3900 T5899 T5894 appos Cftr,type
R3901 T5900 T5899 punct (,Cftr
R3902 T5901 T5899 punct +,Cftr
R3903 T5902 T5899 punct /,Cftr
R3904 T5903 T5899 punct +,Cftr
R3905 T5904 T5894 punct ),type
R3906 T5905 T5894 punct ],type
R3907 T5906 T5894 cc or,type
R3908 T5907 T5894 conj Cftr,type
R3909 T5908 T5907 amod homozygous,Cftr
R3910 T5909 T5907 amod null,Cftr
R3911 T5910 T5907 punct [,Cftr
R3912 T5911 T5907 appos Cftr,Cftr
R3913 T5912 T5911 punct (,Cftr
R3914 T5913 T5911 punct -,Cftr
R3915 T5914 T5911 punct /,Cftr
R3916 T5915 T5911 punct -,Cftr
R3917 T5916 T5907 punct ),Cftr
R3918 T5917 T5907 punct ],Cftr
R3919 T5918 T5881 punct .,bred

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T5691 852-853 SO_EXT:sequence_nullness_or_absence denotes -
T5690 850-851 SO_EXT:sequence_nullness_or_absence denotes -
T5689 845-849 PR_EXT:000001044 denotes Cftr
T5688 839-843 SO_EXT:sequence_nullness denotes null
T5687 823-827 PR_EXT:000001044 denotes Cftr
T5686 816-817 SO_EXT:normal_or_wild_type_or_present denotes +
T5685 814-815 SO_EXT:normal_or_wild_type_or_present denotes +
T5684 809-813 PR_EXT:000001044 denotes Cftr
T5683 798-807 SO_EXT:wild_type_entity_or_quality denotes wild type
T5682 782-786 PR_EXT:000001044 denotes Cftr
T5681 763-770 SO_EXT:0001023 denotes alleles
T5680 755-762 CHEBI_PR_EXT:gastrin denotes gastrin
T5679 736-745 SO_EXT:wild_type_entity_or_quality denotes wild type
T5678 731-735 NCBITaxon:10088 denotes mice
T5677 716-720 GO_EXT:breeding denotes bred
T5676 706-710 NCBITaxon:10088 denotes mice
T5675 653-657 NCBITaxon:10088 denotes mice
T5674 611-617 SO_EXT:0001026 denotes genome
T5673 573-577 NCBITaxon:10088 denotes mice
T5672 570-571 SO_EXT:sequence_nullness_or_absence denotes -
T5671 568-569 SO_EXT:normal_or_wild_type_or_present denotes +
T5670 563-567 PR_EXT:000001044 denotes Cftr
T5669 515-519 NCBITaxon:10088 denotes mice
T5668 512-513 SO_EXT:sequence_nullness_or_absence denotes -
T5667 510-511 SO_EXT:normal_or_wild_type_or_present denotes +
T5666 502-509 CHEBI_PR_EXT:gastrin denotes gastrin
T5665 447-451 GO_EXT:breeding denotes bred
T5664 403-407 SO_EXT:0000704 denotes gene
T5663 395-402 CHEBI_PR_EXT:gastrin denotes gastrin
T5662 379-387 SO_EXT:sequence_alteration_entity_or_process denotes mutation
T5661 354-358 NCBITaxon:10088 denotes Mice
T5660 259-263 NCBITaxon:10088 denotes mice
T5659 46-53 SO_EXT:0000704 denotes genetic
T5658 24-28 NCBITaxon:10088 denotes mice
T5657 19-23 SO_EXT:sequence_nullness denotes null
T5656 14-18 PR_EXT:000001044 denotes Cftr
T5655 0-9 SO_EXT:wild_type_entity_or_quality denotes Wild type

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T5642 845-849 PR:000001044 denotes Cftr
T5641 823-827 PR:000001044 denotes Cftr
T5640 809-813 PR:000001044 denotes Cftr
T5639 782-786 PR:000001044 denotes Cftr
T5638 763-770 SO:0001023 denotes alleles
T5637 731-735 NCBITaxon:10088 denotes mice
T5636 706-710 NCBITaxon:10088 denotes mice
T5635 653-657 NCBITaxon:10088 denotes mice
T5634 611-617 SO:0001026 denotes genome
T5633 573-577 NCBITaxon:10088 denotes mice
T5632 563-567 PR:000001044 denotes Cftr
T5631 515-519 NCBITaxon:10088 denotes mice
T5630 403-407 SO:0000704 denotes gene
T5629 354-358 NCBITaxon:10088 denotes Mice
T5628 259-263 NCBITaxon:10088 denotes mice
T5627 46-53 SO:0000704 denotes genetic
T5626 24-28 NCBITaxon:10088 denotes mice
T5625 14-18 PR:000001044 denotes Cftr