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PMC:1166548 / 20282-21861 JSONTXT

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Id Subject Object Predicate Lexical cue
T5105 1578-1579 . denotes .
T5104 1577-1578 -RRB- denotes ]
T5103 1575-1577 CD denotes 50
T5102 1574-1575 -LRB- denotes [
T5101 1555-1564 NN denotes signaling
T5100 1565-1573 NNS denotes pathways
T5099 1541-1554 JJ denotes intracellular
T5098 1538-1540 IN denotes of
T5097 1527-1537 NNS denotes components
T5096 1517-1526 JJ denotes important
T5095 1513-1516 VBP denotes are
T5094 1507-1512 WDT denotes which
T5093 1505-1506 -RRB- denotes )
T5092 1503-1505 NN denotes cM
T5091 1500-1502 CD denotes 70
T5090 1498-1500 , denotes ,
T5089 1492-1498 NN denotes chr.10
T5088 1491-1492 -LRB- denotes (
T5087 1483-1484 CD denotes 6
T5086 1479-1482 CC denotes and
T5085 1473-1478 NN denotes Stat2
T5084 1485-1490 NNS denotes genes
T5083 1469-1472 DT denotes the
T5082 1465-1468 CC denotes and
T5081 1463-1464 : denotes ;
T5080 1462-1463 -RRB- denotes ]
T5079 1460-1462 CD denotes 49
T5078 1459-1460 -LRB- denotes [
T5077 1440-1451 NN denotes interleukin
T5076 1437-1439 CD denotes 10
T5075 1436-1437 HYPH denotes -
T5074 1434-1436 NN denotes IL
T5073 1416-1433 JJ denotes anti-inflammatory
T5072 1452-1458 NN denotes family
T5071 1412-1415 DT denotes the
T5070 1409-1411 IN denotes of
T5069 1402-1408 NN denotes member
T5068 1400-1401 DT denotes a
T5067 1398-1400 , denotes ,
T5066 1397-1398 -RRB- denotes )
T5065 1395-1397 NN denotes cM
T5064 1392-1394 CD denotes 67
T5063 1390-1392 , denotes ,
T5062 1384-1390 NN denotes chr.10
T5061 1383-1384 -LRB- denotes (
T5060 1378-1382 NN denotes Il22
T5059 1376-1377 : denotes ;
T5058 1375-1376 -RRB- denotes ]
T5057 1373-1375 CD denotes 48
T5056 1372-1373 -LRB- denotes [
T5055 1361-1371 NNS denotes conditions
T5054 1355-1360 JJ denotes other
T5053 1347-1351 RB denotes well
T5052 1352-1354 IN denotes as
T5051 1344-1346 RB denotes as
T5050 1341-1343 NN denotes CF
T5049 1338-1340 IN denotes in
T5048 1318-1330 JJ denotes inflammatory
T5047 1308-1317 JJ denotes important
T5046 1331-1337 NN denotes signal
T5045 1305-1307 DT denotes an
T5044 1302-1304 VBZ denotes is
T5043 1296-1301 WDT denotes which
T5042 1294-1295 -RRB- denotes )
T5041 1292-1294 NN denotes cM
T5040 1289-1291 CD denotes 67
T5039 1287-1289 , denotes ,
T5038 1281-1287 NN denotes chr.10
T5037 1280-1281 -LRB- denotes (
T5036 1275-1279 NN denotes Ifng
T5035 1273-1274 : denotes ;
T5034 1272-1273 -RRB- denotes ]
T5033 1270-1272 CD denotes 47
T5032 1269-1270 -LRB- denotes [
T5031 1260-1268 NNS denotes bacteria
T5030 1257-1259 IN denotes of
T5029 1251-1256 NNS denotes walls
T5028 1246-1250 NN denotes cell
T5027 1238-1245 VBZ denotes digests
T5026 1233-1237 WDT denotes that
T5025 1220-1224 NN denotes cell
T5024 1213-1219 NN denotes Paneth
T5023 1225-1232 NN denotes product
T5022 1211-1212 DT denotes a
T5021 1208-1210 VBZ denotes is
T5020 1202-1207 WDT denotes which
T5019 1200-1201 -RRB- denotes )
T5018 1198-1200 NN denotes cM
T5017 1195-1197 CD denotes 66
T5016 1193-1195 , denotes ,
T5015 1187-1193 NN denotes chr.10
T5014 1186-1187 -LRB- denotes (
T5013 1181-1185 NN denotes Lyzs
T5012 1179-1180 : denotes ;
T5011 1178-1179 -RRB- denotes ]
T5010 1176-1178 CD denotes 46
T5009 1175-1176 -LRB- denotes [
T5008 1159-1160 HYPH denotes -
T5006 1151-1159 NN denotes antibody
T5005 1148-1150 IN denotes in
T5004 1136-1138 VBZ denotes is
T5003 1139-1147 VBN denotes involved
T5002 1130-1135 WDT denotes which
T5001 1128-1129 -RRB- denotes )
T5000 1126-1128 NN denotes cM
T4999 1123-1125 CD denotes 65
T4998 1121-1123 , denotes ,
T4997 1115-1121 NN denotes chr.10
T4996 1114-1115 -LRB- denotes (
T4995 1110-1113 NN denotes Im5
T4994 1108-1109 : denotes ;
T4993 1107-1108 -RRB- denotes ]
T4992 1105-1107 CD denotes 45
T4991 1104-1105 -LRB- denotes [
T4990 1088-1103 NN denotes differentiation
T4989 1083-1087 NN denotes cell
T4988 1078-1082 NN denotes mast
T4987 1074-1077 IN denotes for
T4986 1066-1073 JJ denotes crucial
T4985 1063-1065 VBZ denotes is
T4984 1059-1062 CC denotes and
T4983 1057-1059 , denotes ,
T4982 1051-1057 NN denotes factor
T4981 1046-1050 NN denotes cell
T4980 1041-1045 NN denotes stem
T4979 1038-1040 IN denotes as
T4978 1027-1031 RB denotes also
T4977 1024-1026 VBZ denotes is
T4976 1032-1037 VBN denotes known
T4975 1018-1023 WDT denotes which
T4974 1016-1017 -RRB- denotes )
T4973 1014-1016 NN denotes cM
T4972 1011-1013 CD denotes 57
T4971 1009-1011 , denotes ,
T4970 1003-1009 NN denotes chr.10
T4969 1002-1003 -LRB- denotes (
T4968 997-1001 NN denotes Kitl
T4967 995-996 : denotes ;
T4966 994-995 -RRB- denotes ]
T4965 992-994 CD denotes 44
T4964 991-992 -LRB- denotes [
T4963 983-990 NNS denotes tissues
T4962 974-982 VBN denotes inflamed
T4961 969-973 IN denotes into
T4960 956-968 NN denotes infiltration
T4959 945-955 NN denotes lymphocyte
T4958 942-944 IN denotes in
T4957 930-932 VBZ denotes is
T4956 933-941 VBN denotes involved
T4955 924-929 WDT denotes which
T4954 922-923 -RRB- denotes )
T4953 920-922 NN denotes cM
T4952 918-919 CD denotes 7
T4951 916-918 , denotes ,
T4950 911-916 NN denotes chr.9
T4949 910-911 -LRB- denotes (
T4948 904-909 NN denotes Icam1
T4947 902-903 : denotes ;
T4946 901-902 -RRB- denotes ]
T4945 899-901 CD denotes 43
T4944 898-899 -LRB- denotes [
T4943 896-897 -RRB- denotes )
T4942 886-887 HYPH denotes -
T4941 887-896 NNS denotes defensins
T4940 885-886 NN denotes α
T4939 884-885 -LRB- denotes (
T4938 874-883 NNS denotes cryptdins
T4937 865-866 HYPH denotes -
T4936 866-873 VBN denotes derived
T4935 861-865 NN denotes cell
T4914 777-779 NN denotes cM
T4913 775-776 CD denotes 1
T4912 773-775 , denotes ,
T4911 768-773 NN denotes chr.9
T4910 767-768 -LRB- denotes (
T4909 762-766 NN denotes Mmp3
T4908 760-761 : denotes ;
T4907 759-760 -RRB- denotes )
T4906 757-759 NN denotes cM
T4905 754-756 CD denotes 98
T4904 752-754 , denotes ,
T4903 747-752 NN denotes chr.1
T4902 746-747 -LRB- denotes (
T4901 741-745 NN denotes Tlr5
T4900 722-731 NN denotes flagellin
T4899 732-740 NN denotes receptor
T4898 718-721 DT denotes the
T4897 716-717 : denotes ;
T4896 715-716 -RRB- denotes )
T4895 713-715 NN denotes cM
T4894 708-712 CD denotes 94.2
T4893 706-708 , denotes ,
T4892 701-706 NN denotes chr.1
T4891 698-700 IN denotes at
T4890 691-697 NN denotes Fcer1a
T4889 689-690 : denotes ;
T4888 687-689 NN denotes cM
T4887 682-686 CD denotes 93.3
T4886 680-682 , denotes ,
T4885 675-680 NN denotes chr.1
T4884 672-674 IN denotes at
T4883 665-671 NN denotes Fcer1g
T4882 663-664 : denotes ;
T4881 661-663 NN denotes cM
T4880 656-660 CD denotes 92.3
T4879 654-656 , denotes ,
T4878 649-654 NN denotes chr.1
T4877 646-648 IN denotes at
T4876 640-645 NN denotes Fcgr3
T4875 636-639 CC denotes and
T4874 634-636 , denotes ,
T4873 628-634 NN denotes Fcgr2b
T4872 626-628 , denotes ,
T4871 621-626 NN denotes Fcrl3
T4870 620-621 -LRB- denotes (
T4869 602-604 NN denotes Fc
T4868 605-613 NN denotes receptor
T4867 587-601 NN denotes immunoglobulin
T4866 614-619 NNS denotes genes
T4865 579-586 JJ denotes several
T4864 577-578 : denotes ;
T4863 576-577 -RRB- denotes ]
T4862 574-576 CD denotes 41
T4861 573-574 -LRB- denotes [
T4860 561-572 NNS denotes lymphocytes
T4859 552-560 VBZ denotes recruits
T4858 548-551 CC denotes and
T4857 542-547 NNS denotes cells
T4856 537-541 NN denotes mast
T4855 534-536 IN denotes by
T4854 521-523 VBZ denotes is
T4853 524-533 VBN denotes expressed
T4852 515-520 WDT denotes which
T4851 513-514 -RRB- denotes )
T4850 511-513 NN denotes cM
T4849 508-510 CD denotes 87
T4848 506-508 , denotes ,
T4847 501-506 NN denotes chr.1
T4846 500-501 -LRB- denotes (
T4845 495-499 NN denotes Xcl1
T4844 480-489 NN denotes chemokine
T4843 490-494 NN denotes gene
T4842 476-479 DT denotes the
T4841 474-475 : denotes ;
T4840 473-474 -RRB- denotes ]
T4839 471-473 CD denotes 40
T4838 470-471 -LRB- denotes [
T4837 468-469 -RRB- denotes )
T4836 466-468 NN denotes cM
T4835 460-461 SYM denotes
T4834 461-465 CD denotes 93.3
T4833 456-460 CD denotes 89.5
T4832 454-456 , denotes ,
T4831 447-448 : denotes ;
T4830 446-447 CD denotes 9
T4829 442-445 CC denotes and
T4828 440-442 , denotes ,
T4827 439-440 CD denotes 6
T4826 437-439 , denotes ,
T4825 436-437 CD denotes 5
T4824 434-436 , denotes ,
T4823 433-434 CD denotes 2
T4822 431-433 , denotes ,
T4821 425-431 NN denotes slamf1
T4820 449-454 NN denotes chr.1
T4819 424-425 -LRB- denotes (
T4818 412-416 NN denotes Slam
T4817 417-423 NN denotes family
T4816 408-411 DT denotes the
T4815 405-407 IN denotes of
T4814 388-395 NN denotes surface
T4813 396-404 NN denotes proteins
T4812 383-387 NN denotes cell
T4811 376-382 JJ denotes immune
T4810 373-375 IN denotes of
T4809 365-372 NNS denotes members
T4808 357-364 JJ denotes several
T4807 355-356 : denotes ;
T4806 354-355 -RRB- denotes ]
T4805 352-354 CD denotes 39
T4804 351-352 -LRB- denotes [
T4803 343-350 NNS denotes tissues
T4802 334-342 JJ denotes inflamed
T4801 329-333 IN denotes into
T4800 316-328 NN denotes infiltration
T4799 311-315 NN denotes cell
T4798 304-310 JJ denotes immune
T4797 301-303 IN denotes in
T4796 288-291 VBP denotes are
T4795 292-300 VBN denotes involved
T4794 282-287 WDT denotes which
T4793 280-281 -RRB- denotes )
T4792 278-280 NN denotes cM
T4791 273-277 CD denotes 86.6
T4790 271-273 , denotes ,
T4789 264-266 , denotes ,
T4788 260-264 NN denotes Selp
T4787 258-260 , denotes ,
T4786 254-258 NN denotes Sell
T4785 252-254 , denotes ,
T4784 248-252 NN denotes Sele
T4783 266-271 NN denotes chr.1
T4782 247-248 -LRB- denotes (
T4781 232-240 NN denotes selectin
T4780 241-246 NNS denotes genes
T4779 226-231 CD denotes three
T4778 224-225 : denotes ;
T4777 223-224 -RRB- denotes ]
T4776 220-221 , denotes ,
T4775 218-220 CD denotes 37
T4774 221-223 CD denotes 38
T4773 217-218 -LRB- denotes [
T4772 206-216 NN denotes activation
T4771 201-205 NN denotes cell
T4770 199-200 NN denotes T
T4769 196-198 IN denotes in
T4768 183-186 VBP denotes are
T4767 187-195 VBN denotes involved
T4766 177-182 WDT denotes which
T4765 175-176 -RRB- denotes )
T4764 173-175 NN denotes cM
T4763 169-170 SYM denotes
T4762 170-172 CD denotes 85
T4761 165-169 CD denotes 84.9
T4760 163-165 , denotes ,
T4759 158-163 NN denotes chr.1
T4758 157-158 -LRB- denotes (
T4757 155-156 CD denotes 8
T4756 151-154 CC denotes and
T4755 149-151 , denotes ,
T4754 148-149 CD denotes 6
T4753 146-148 , denotes ,
T4752 132-139 NNS denotes members
T4751 120-131 NN denotes superfamily
T4750 140-146 NN denotes Tnfsf4
T4749 116-119 NN denotes TNF
T4748 114-116 : denotes :
T4747 104-114 VBN denotes identified
T4746 96-103 NNS denotes markers
T4745 92-95 DT denotes the
T4744 89-91 IN denotes of
T4743 81-88 NNS denotes regions
T4742 77-80 DT denotes the
T4741 74-76 IN denotes in
T4740 62-65 VBP denotes are
T4739 48-54 JJ denotes immune
T4738 55-61 NN denotes system
T4737 44-47 DT denotes the
T4736 40-43 CC denotes and
T4735 27-39 NN denotes inflammation
T4734 24-26 IN denotes in
T4733 15-23 VBN denotes involved
T4732 66-73 VBN denotes located
T4731 9-14 NNS denotes genes
T4730 1-8 JJ denotes Several
T4729 0-1579 sentence denotes Several genes involved in inflammation and the immune system are located in the regions of the markers identified: TNF superfamily members Tnfsf4, 6, and 8 (chr.1, 84.9–85 cM) which are involved in T cell activation [37,38]; three selectin genes (Sele, Sell, Selp, chr.1, 86.6 cM) which are involved in immune cell infiltration into inflamed tissues [39]; several members of immune cell surface proteins of the Slam family (slamf1, 2, 5, 6, and 9; chr.1, 89.5–93.3 cM) [40]; the chemokine gene Xcl1 (chr.1, 87 cM) which is expressed by mast cells and recruits lymphocytes [41]; several immunoglobulin Fc receptor genes (Fcrl3, Fcgr2b, and Fcgr3 at chr.1, 92.3 cM; Fcer1g at chr.1, 93.3 cM; Fcer1a at chr.1, 94.2 cM); the flagellin receptor Tlr5 (chr.1, 98 cM); Mmp3 (chr.9, 1 cM) which recruits CD4+ lymphocytes [42]; Mmp7 (chr.9, 1 cM) which activates Paneth cell-derived cryptdins (α-defensins) [43]; Icam1 (chr.9, 7 cM) which is involved in lymphocyte infiltration into inflamed tissues [44]; Kitl (chr.10, 57 cM) which is also known as stem cell factor, and is crucial for mast cell differentiation [45]; Im5 (chr.10, 65 cM) which is involved in antibody-responsiveness [46]; Lyzs (chr.10, 66 cM) which is a Paneth cell product that digests cell walls of bacteria [47]; Ifng (chr.10, 67 cM) which is an important inflammatory signal in CF as well as other conditions [48]; Il22 (chr.10, 67 cM), a member of the anti-inflammatory IL-10 interleukin family [49]; and the Stat2 and 6 genes (chr.10, 70 cM) which are important components of intracellular signaling pathways [50].
T4934 854-860 NN denotes Paneth
T4933 844-853 VBZ denotes activates
T4932 838-843 WDT denotes which
T4931 836-837 -RRB- denotes )
T4930 834-836 NN denotes cM
T4929 832-833 CD denotes 1
T4928 830-832 , denotes ,
T4927 825-830 NN denotes chr.9
T4926 824-825 -LRB- denotes (
T4925 819-823 NN denotes Mmp7
T4924 817-818 : denotes ;
T4923 816-817 -RRB- denotes ]
T4922 814-816 CD denotes 42
T4921 813-814 -LRB- denotes [
T4920 799-800 SYM denotes +
T4919 801-812 NNS denotes lymphocytes
T4918 796-799 NN denotes CD4
T4917 787-795 VBZ denotes recruits
T4916 781-786 WDT denotes which
T4915 779-780 -RRB- denotes )
T5007 1160-1174 NN denotes responsiveness
R2932 T4730 T4731 amod Several,genes
R2933 T4731 T4732 nsubjpass genes,located
R2934 T4733 T4731 acl involved,genes
R2935 T4734 T4733 prep in,involved
R2936 T4735 T4734 pobj inflammation,in
R2937 T4736 T4735 cc and,inflammation
R2938 T4737 T4738 det the,system
R2939 T4738 T4735 conj system,inflammation
R2940 T4739 T4738 amod immune,system
R2941 T4740 T4732 auxpass are,located
R2942 T4741 T4732 prep in,located
R2943 T4742 T4743 det the,regions
R2944 T4743 T4741 pobj regions,in
R2945 T4744 T4743 prep of,regions
R2946 T4745 T4746 det the,markers
R2947 T4746 T4744 pobj markers,of
R2948 T4747 T4746 acl identified,markers
R2949 T4748 T4746 punct : ,markers
R2950 T4749 T4750 compound TNF,Tnfsf4
R2951 T4750 T4746 appos Tnfsf4,markers
R2952 T4751 T4750 compound superfamily,Tnfsf4
R2953 T4752 T4750 compound members,Tnfsf4
R2954 T4753 T4750 punct ", ",Tnfsf4
R2955 T4754 T4750 nummod 6,Tnfsf4
R2956 T4755 T4750 punct ", ",Tnfsf4
R2957 T4756 T4750 cc and,Tnfsf4
R2958 T4757 T4750 conj 8,Tnfsf4
R2959 T4758 T4759 punct (,chr.1
R2960 T4759 T4750 parataxis chr.1,Tnfsf4
R2961 T4760 T4759 punct ", ",chr.1
R2962 T4761 T4762 quantmod 84.9,85
R2963 T4762 T4764 nummod 85,cM
R2964 T4763 T4762 punct –,85
R2965 T4764 T4759 npadvmod cM,chr.1
R2966 T4765 T4759 punct ),chr.1
R2967 T4766 T4767 dep which,involved
R2968 T4767 T4750 relcl involved,Tnfsf4
R2969 T4768 T4767 auxpass are,involved
R2970 T4769 T4767 prep in,involved
R2971 T4770 T4771 compound T,cell
R2972 T4771 T4772 compound cell,activation
R2973 T4772 T4769 pobj activation,in
R2974 T4773 T4774 punct [,38
R2975 T4774 T4750 parataxis 38,Tnfsf4
R2976 T4775 T4774 nummod 37,38
R2977 T4776 T4774 punct ",",38
R2978 T4777 T4774 punct ],38
R2979 T4778 T4750 punct ;,Tnfsf4
R2980 T4779 T4780 nummod three,genes
R2981 T4780 T4750 conj genes,Tnfsf4
R2982 T4781 T4780 compound selectin,genes
R2983 T4782 T4783 punct (,chr.1
R2984 T4783 T4780 parataxis chr.1,genes
R2985 T4784 T4783 dep Sele,chr.1
R2986 T4785 T4784 punct ", ",Sele
R2987 T4786 T4784 appos Sell,Sele
R2988 T4787 T4784 punct ", ",Sele
R2989 T4788 T4784 appos Selp,Sele
R2990 T4789 T4783 punct ", ",chr.1
R2991 T4790 T4783 punct ", ",chr.1
R2992 T4791 T4792 nummod 86.6,cM
R2993 T4792 T4783 npadvmod cM,chr.1
R2994 T4793 T4783 punct ),chr.1
R2995 T4794 T4795 dep which,involved
R2996 T4795 T4780 relcl involved,genes
R2997 T4796 T4795 auxpass are,involved
R2998 T4797 T4795 prep in,involved
R2999 T4798 T4799 amod immune,cell
R3000 T4799 T4800 compound cell,infiltration
R3001 T4800 T4797 pobj infiltration,in
R3002 T4801 T4800 prep into,infiltration
R3003 T4802 T4803 amod inflamed,tissues
R3004 T4803 T4801 pobj tissues,into
R3005 T4804 T4805 punct [,39
R3006 T4805 T4780 parataxis 39,genes
R3007 T4806 T4805 punct ],39
R3008 T4807 T4780 punct ;,genes
R3009 T4808 T4809 amod several,members
R3010 T4809 T4780 conj members,genes
R3011 T4810 T4809 prep of,members
R3012 T4811 T4812 amod immune,cell
R3013 T4812 T4813 compound cell,proteins
R3014 T4813 T4810 pobj proteins,of
R3015 T4814 T4813 compound surface,proteins
R3016 T4815 T4813 prep of,proteins
R3017 T4816 T4817 det the,family
R3018 T4817 T4815 pobj family,of
R3019 T4818 T4817 compound Slam,family
R3020 T4819 T4820 punct (,chr.1
R3021 T4820 T4813 parataxis chr.1,proteins
R3022 T4821 T4820 dep slamf1,chr.1
R3023 T4822 T4821 punct ", ",slamf1
R3024 T4823 T4821 nummod 2,slamf1
R3025 T4824 T4821 punct ", ",slamf1
R3026 T4825 T4821 nummod 5,slamf1
R3027 T4826 T4821 punct ", ",slamf1
R3028 T4827 T4821 nummod 6,slamf1
R3029 T4828 T4821 punct ", ",slamf1
R3030 T4829 T4821 cc and,slamf1
R3031 T4830 T4821 conj 9,slamf1
R3032 T4831 T4820 punct ;,chr.1
R3033 T4832 T4820 punct ", ",chr.1
R3034 T4833 T4834 quantmod 89.5,93.3
R3035 T4834 T4836 nummod 93.3,cM
R3036 T4835 T4834 punct –,93.3
R3037 T4836 T4820 npadvmod cM,chr.1
R3038 T4837 T4820 punct ),chr.1
R3039 T4838 T4839 punct [,40
R3040 T4839 T4809 parataxis 40,members
R3041 T4840 T4839 punct ],40
R3042 T4841 T4809 punct ;,members
R3043 T4842 T4843 det the,gene
R3044 T4843 T4809 conj gene,members
R3045 T4844 T4843 compound chemokine,gene
R3046 T4845 T4843 appos Xcl1,gene
R3047 T4846 T4847 punct (,chr.1
R3048 T4847 T4843 parataxis chr.1,gene
R3049 T4848 T4847 punct ", ",chr.1
R3050 T4849 T4850 nummod 87,cM
R3051 T4850 T4847 npadvmod cM,chr.1
R3052 T4851 T4847 punct ),chr.1
R3053 T4852 T4853 dep which,expressed
R3054 T4853 T4843 relcl expressed,gene
R3055 T4854 T4853 auxpass is,expressed
R3056 T4855 T4853 agent by,expressed
R3057 T4856 T4857 compound mast,cells
R3058 T4857 T4855 pobj cells,by
R3059 T4858 T4857 cc and,cells
R3060 T4859 T4860 nmod recruits,lymphocytes
R3061 T4860 T4857 conj lymphocytes,cells
R3062 T4861 T4862 punct [,41
R3063 T4862 T4843 parataxis 41,gene
R3064 T4863 T4862 punct ],41
R3065 T4864 T4843 punct ;,gene
R3066 T4865 T4866 amod several,genes
R3067 T4866 T4843 conj genes,gene
R3068 T4867 T4868 compound immunoglobulin,receptor
R3069 T4868 T4866 compound receptor,genes
R3070 T4869 T4868 compound Fc,receptor
R3071 T4870 T4871 punct (,Fcrl3
R3072 T4871 T4866 parataxis Fcrl3,genes
R3073 T4872 T4871 punct ", ",Fcrl3
R3074 T4873 T4871 conj Fcgr2b,Fcrl3
R3075 T4874 T4873 punct ", ",Fcgr2b
R3076 T4875 T4873 cc and,Fcgr2b
R3077 T4876 T4873 conj Fcgr3,Fcgr2b
R3078 T4877 T4871 prep at,Fcrl3
R3079 T4878 T4877 pobj chr.1,at
R3080 T4879 T4878 punct ", ",chr.1
R3081 T4880 T4881 nummod 92.3,cM
R3082 T4881 T4878 npadvmod cM,chr.1
R3083 T4882 T4871 punct ;,Fcrl3
R3084 T4883 T4871 appos Fcer1g,Fcrl3
R3085 T4884 T4883 prep at,Fcer1g
R3086 T4885 T4884 pobj chr.1,at
R3087 T4886 T4885 punct ", ",chr.1
R3088 T4887 T4888 nummod 93.3,cM
R3089 T4888 T4885 npadvmod cM,chr.1
R3090 T4889 T4871 punct ;,Fcrl3
R3091 T4890 T4871 appos Fcer1a,Fcrl3
R3092 T4891 T4890 prep at,Fcer1a
R3093 T4892 T4891 pobj chr.1,at
R3094 T4893 T4892 punct ", ",chr.1
R3095 T4894 T4895 nummod 94.2,cM
R3096 T4895 T4892 npadvmod cM,chr.1
R3097 T4896 T4871 punct ),Fcrl3
R3098 T4897 T4866 punct ;,genes
R3099 T4898 T4899 det the,receptor
R3100 T4899 T4866 conj receptor,genes
R3101 T4900 T4899 compound flagellin,receptor
R3102 T4901 T4899 appos Tlr5,receptor
R3103 T4902 T4903 punct (,chr.1
R3104 T4903 T4899 parataxis chr.1,receptor
R3105 T4904 T4903 punct ", ",chr.1
R3106 T4905 T4906 nummod 98,cM
R3107 T4906 T4903 npadvmod cM,chr.1
R3108 T4907 T4903 punct ),chr.1
R3109 T4908 T4899 punct ;,receptor
R3110 T4909 T4899 conj Mmp3,receptor
R3111 T4910 T4911 punct (,chr.9
R3112 T4911 T4909 parataxis chr.9,Mmp3
R3113 T4912 T4911 punct ", ",chr.9
R3114 T4913 T4914 nummod 1,cM
R3115 T4914 T4911 npadvmod cM,chr.9
R3116 T4915 T4911 punct ),chr.9
R3117 T4916 T4917 dep which,recruits
R3118 T4917 T4909 relcl recruits,Mmp3
R3119 T4918 T4919 nmod CD4,lymphocytes
R3120 T4919 T4917 dobj lymphocytes,recruits
R3121 T4920 T4918 punct +,CD4
R3122 T4921 T4922 punct [,42
R3123 T4922 T4909 parataxis 42,Mmp3
R3124 T4923 T4922 punct ],42
R3125 T4924 T4909 punct ;,Mmp3
R3126 T4925 T4909 conj Mmp7,Mmp3
R3127 T4926 T4927 punct (,chr.9
R3128 T4927 T4925 parataxis chr.9,Mmp7
R3129 T4928 T4927 punct ", ",chr.9
R3130 T4929 T4930 nummod 1,cM
R3131 T4930 T4927 npadvmod cM,chr.9
R3132 T4931 T4927 punct ),chr.9
R3133 T4932 T4933 dep which,activates
R3134 T4933 T4925 relcl activates,Mmp7
R3135 T4934 T4935 compound Paneth,cell
R3136 T4935 T4936 npadvmod cell,derived
R3137 T4936 T4938 amod derived,cryptdins
R3138 T4937 T4936 punct -,derived
R3139 T4938 T4933 dobj cryptdins,activates
R3140 T4939 T4938 punct (,cryptdins
R3141 T4940 T4941 compound α,defensins
R3142 T4941 T4938 appos defensins,cryptdins
R3143 T4942 T4941 punct -,defensins
R3144 T4943 T4925 punct ),Mmp7
R3145 T4944 T4945 punct [,43
R3146 T4945 T4925 parataxis 43,Mmp7
R3147 T4946 T4945 punct ],43
R3148 T4947 T4925 punct ;,Mmp7
R3149 T4948 T4925 conj Icam1,Mmp7
R3150 T4949 T4950 punct (,chr.9
R3151 T4950 T4948 parataxis chr.9,Icam1
R3152 T4951 T4950 punct ", ",chr.9
R3153 T4952 T4953 nummod 7,cM
R3154 T4953 T4950 npadvmod cM,chr.9
R3155 T4954 T4950 punct ),chr.9
R3156 T4955 T4956 dep which,involved
R3157 T4956 T4948 relcl involved,Icam1
R3158 T4957 T4956 auxpass is,involved
R3159 T4958 T4956 prep in,involved
R3160 T4959 T4960 compound lymphocyte,infiltration
R3161 T4960 T4958 pobj infiltration,in
R3162 T4961 T4960 prep into,infiltration
R3163 T4962 T4963 amod inflamed,tissues
R3164 T4963 T4961 pobj tissues,into
R3165 T4964 T4965 punct [,44
R3166 T4965 T4948 parataxis 44,Icam1
R3167 T4966 T4965 punct ],44
R3168 T4967 T4948 punct ;,Icam1
R3169 T4968 T4948 conj Kitl,Icam1
R3170 T4969 T4970 punct (,chr.10
R3171 T4970 T4968 parataxis chr.10,Kitl
R3172 T4971 T4970 punct ", ",chr.10
R3173 T4972 T4973 nummod 57,cM
R3174 T4973 T4970 npadvmod cM,chr.10
R3175 T4974 T4970 punct ),chr.10
R3176 T4975 T4976 dep which,known
R3177 T4976 T4968 relcl known,Kitl
R3178 T4977 T4976 auxpass is,known
R3179 T4978 T4976 advmod also,known
R3180 T4979 T4976 prep as,known
R3181 T4980 T4981 compound stem,cell
R3182 T4981 T4982 compound cell,factor
R3183 T4982 T4979 pobj factor,as
R3184 T4983 T4976 punct ", ",known
R3185 T4984 T4976 cc and,known
R3186 T4985 T4976 conj is,known
R3187 T4986 T4985 acomp crucial,is
R3188 T4987 T4986 prep for,crucial
R3189 T4988 T4989 compound mast,cell
R3190 T4989 T4990 compound cell,differentiation
R3191 T4990 T4987 pobj differentiation,for
R3192 T4991 T4992 punct [,45
R3193 T4992 T4968 parataxis 45,Kitl
R3194 T4993 T4992 punct ],45
R3195 T4994 T4968 punct ;,Kitl
R3196 T4995 T4968 conj Im5,Kitl
R3197 T4996 T4997 punct (,chr.10
R3198 T4997 T4995 parataxis chr.10,Im5
R3199 T4998 T4997 punct ", ",chr.10
R3200 T4999 T5000 nummod 65,cM
R3201 T5000 T4997 npadvmod cM,chr.10
R3202 T5001 T4997 punct ),chr.10
R3203 T5002 T5003 dep which,involved
R3204 T5003 T4995 relcl involved,Im5
R3205 T5004 T5003 auxpass is,involved
R3206 T5005 T5003 prep in,involved
R3207 T5006 T5007 compound antibody,responsiveness
R3208 T5007 T5005 pobj responsiveness,in
R3209 T5008 T5007 punct -,responsiveness
R3210 T5009 T5010 punct [,46
R3211 T5010 T4995 parataxis 46,Im5
R3212 T5011 T5010 punct ],46
R3213 T5012 T4995 punct ;,Im5
R3214 T5013 T4995 conj Lyzs,Im5
R3215 T5014 T5015 punct (,chr.10
R3216 T5015 T5013 parataxis chr.10,Lyzs
R3217 T5016 T5015 punct ", ",chr.10
R3218 T5017 T5018 nummod 66,cM
R3219 T5018 T5015 npadvmod cM,chr.10
R3220 T5019 T5015 punct ),chr.10
R3221 T5020 T5021 dep which,is
R3222 T5021 T5013 relcl is,Lyzs
R3223 T5022 T5023 det a,product
R3224 T5023 T5021 attr product,is
R3225 T5024 T5025 compound Paneth,cell
R3226 T5025 T5023 compound cell,product
R3227 T5026 T5027 dep that,digests
R3228 T5027 T5023 relcl digests,product
R3229 T5028 T5029 compound cell,walls
R3230 T5029 T5027 dobj walls,digests
R3231 T5030 T5029 prep of,walls
R3232 T5031 T5030 pobj bacteria,of
R3233 T5032 T5033 punct [,47
R3234 T5033 T5013 parataxis 47,Lyzs
R3235 T5034 T5033 punct ],47
R3236 T5035 T5013 punct ;,Lyzs
R3237 T5036 T5013 conj Ifng,Lyzs
R3238 T5037 T5038 punct (,chr.10
R3239 T5038 T5036 parataxis chr.10,Ifng
R3240 T5039 T5038 punct ", ",chr.10
R3241 T5040 T5041 nummod 67,cM
R3242 T5041 T5038 npadvmod cM,chr.10
R3243 T5042 T5038 punct ),chr.10
R3244 T5043 T5044 dep which,is
R3245 T5044 T5036 relcl is,Ifng
R3246 T5045 T5046 det an,signal
R3247 T5046 T5044 attr signal,is
R3248 T5047 T5046 amod important,signal
R3249 T5048 T5046 amod inflammatory,signal
R3250 T5049 T5046 prep in,signal
R3251 T5050 T5049 pobj CF,in
R3252 T5051 T5052 advmod as,as
R3253 T5052 T5050 cc as,CF
R3254 T5053 T5052 advmod well,as
R3255 T5054 T5055 amod other,conditions
R3256 T5055 T5050 conj conditions,CF
R3257 T5056 T5057 punct [,48
R3258 T5057 T5036 parataxis 48,Ifng
R3259 T5058 T5057 punct ],48
R3260 T5059 T5036 punct ;,Ifng
R3261 T5060 T5036 conj Il22,Ifng
R3262 T5061 T5062 punct (,chr.10
R3263 T5062 T5060 parataxis chr.10,Il22
R3264 T5063 T5062 punct ", ",chr.10
R3265 T5064 T5065 nummod 67,cM
R3266 T5065 T5062 npadvmod cM,chr.10
R3267 T5066 T5062 punct ),chr.10
R3268 T5067 T5060 punct ", ",Il22
R3269 T5068 T5069 det a,member
R3270 T5069 T5060 appos member,Il22
R3271 T5070 T5069 prep of,member
R3272 T5071 T5072 det the,family
R3273 T5072 T5070 pobj family,of
R3274 T5073 T5072 amod anti-inflammatory,family
R3275 T5074 T5072 nmod IL,family
R3276 T5075 T5074 punct -,IL
R3277 T5076 T5074 nummod 10,IL
R3278 T5077 T5072 compound interleukin,family
R3279 T5078 T5079 punct [,49
R3280 T5079 T5060 parataxis 49,Il22
R3281 T5080 T5079 punct ],49
R3282 T5081 T5060 punct ;,Il22
R3283 T5082 T5060 cc and,Il22
R3284 T5083 T5084 det the,genes
R3285 T5084 T5060 conj genes,Il22
R3286 T5085 T5084 nmod Stat2,genes
R3287 T5086 T5085 cc and,Stat2
R3288 T5087 T5085 conj 6,Stat2
R3289 T5088 T5089 punct (,chr.10
R3290 T5089 T5084 parataxis chr.10,genes
R3291 T5090 T5089 punct ", ",chr.10
R3292 T5091 T5092 nummod 70,cM
R3293 T5092 T5089 npadvmod cM,chr.10
R3294 T5093 T5089 punct ),chr.10
R3295 T5094 T5095 dep which,are
R3296 T5095 T5084 relcl are,genes
R3297 T5096 T5097 amod important,components
R3298 T5097 T5095 attr components,are
R3299 T5098 T5097 prep of,components
R3300 T5099 T5100 amod intracellular,pathways
R3301 T5100 T5098 pobj pathways,of
R3302 T5101 T5100 compound signaling,pathways
R3303 T5102 T5103 punct [,50
R3304 T5103 T5084 parataxis 50,genes
R3305 T5104 T5103 punct ],50
R3306 T5105 T4732 punct .,located

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T4219 1546-1554 CL_GO_EXT:cell denotes cellular
T4218 1541-1573 GO:0035556 denotes intracellular signaling pathways
T4217 1541-1554 GO:0005622 denotes intracellular
T4216 1492-1496 GO_SO_EXT:chromosome denotes chr.
T4215 1485-1490 SO_EXT:0000704 denotes genes
T4214 1473-1478 PR_EXT:000002088 denotes Stat2
T4213 1421-1433 GO_PATO_EXT:inflammatory_process_or_quality denotes inflammatory
T4212 1434-1458 PR_EXT:000001335 denotes IL-10 interleukin family
T4211 1402-1411 _FRAGMENT denotes member of
T4210 1384-1388 GO_SO_EXT:chromosome denotes chr.
T4209 1378-1382 PR_EXT:000001383 denotes Il22
T4208 1318-1330 GO_PATO_EXT:inflammatory_process_or_quality denotes inflammatory
T4207 1281-1285 GO_SO_EXT:chromosome denotes chr.
T4206 1275-1279 PR_EXT:000000017 denotes Ifng
T4205 1260-1268 NCBITaxon:2 denotes bacteria
T4204 1246-1256 GO:0005618 denotes cell walls
T4203 1246-1250 CL_GO_EXT:cell denotes cell
T4202 1220-1224 CL_GO_EXT:cell denotes cell
T4201 1213-1224 CL:0000510 denotes Paneth cell
T4200 1187-1191 GO_SO_EXT:chromosome denotes chr.
T4199 1181-1185 GO_EXT:0003796 denotes Lyzs
T4198 1181-1185 PR_EXT:000010030 denotes Lyzs
T4197 1151-1159 GO:0042571 denotes antibody
T4196 1115-1119 GO_SO_EXT:chromosome denotes chr.
T4195 1083-1103 GO:0030154 denotes cell differentiation
T4194 1083-1087 CL_GO_EXT:cell denotes cell
T4193 1078-1087 CL:0000097 denotes mast cell
T4192 1046-1050 CL_GO_EXT:cell denotes cell
T4191 1041-1057 PR_EXT:000009345 denotes stem cell factor
T4190 1041-1050 CL:0000034 denotes stem cell
T4189 1003-1007 GO_SO_EXT:chromosome denotes chr.
T4188 997-1001 PR_EXT:000009345 denotes Kitl
T4187 983-990 UBERON:0000479 denotes tissues
T4186 974-982 GO_PATO_EXT:inflammatory_process_or_quality denotes inflamed
T4185 945-955 CL:0000542 denotes lymphocyte
T4184 911-915 GO_SO_EXT:chromosome denotes chr.
T4183 904-909 PR_EXT:000001467 denotes Icam1
T4182 887-896 CHEBI:82761 denotes defensins
T4181 861-865 CL_GO_EXT:cell denotes cell
T4180 854-865 CL:0000510 denotes Paneth cell
T4179 825-829 GO_SO_EXT:chromosome denotes chr.
T4178 819-823 PR_EXT:000010489 denotes Mmp7
T4177 801-812 CL:0000542 denotes lymphocytes
T4176 796-799 PR_EXT:000001004 denotes CD4
T4175 787-795 GO_EXT:biological_recruitment denotes recruits
T4174 768-772 GO_SO_EXT:chromosome denotes chr.
T4173 762-766 PR_EXT:000010488 denotes Mmp3
T4172 747-751 GO_SO_EXT:chromosome denotes chr.
T4171 741-745 PR_EXT:000001156 denotes Tlr5
T4170 732-740 GO_EXT:0004872 denotes receptor
T4169 701-705 GO_SO_EXT:chromosome denotes chr.
T4168 691-697 PR_EXT:000007431 denotes Fcer1a
T4167 675-679 GO_SO_EXT:chromosome denotes chr.
T4166 665-671 PR_EXT:000007432 denotes Fcer1g
T4165 649-653 GO_SO_EXT:chromosome denotes chr.
T4164 640-645 PR_EXT:000001483 denotes Fcgr3
T4163 628-634 PR_EXT:000001481 denotes Fcgr2b
T4162 621-626 PR_EXT:000007442 denotes Fcrl3
T4161 614-619 SO_EXT:0000704 denotes genes
T4160 587-613 GO_EXT:0019763 denotes immunoglobulin Fc receptor
T4159 587-601 GO:0019814 denotes immunoglobulin
T4158 561-572 CL:0000542 denotes lymphocytes
T4157 552-560 GO_EXT:biological_recruitment denotes recruits
T4156 542-547 CL_GO_EXT:cell denotes cells
T4155 537-547 CL:0000097 denotes mast cells
T4154 524-533 GO:0010467 denotes expressed
T4153 501-505 GO_SO_EXT:chromosome denotes chr.
T4152 495-499 PR_EXT:000002140 denotes Xcl1
T4151 490-494 SO_EXT:0000704 denotes gene
T4150 480-489 GO_EXT:0008009 denotes chemokine
T4149 449-453 GO_SO_EXT:chromosome denotes chr.
T4148 425-431 PR_EXT:000001833 denotes slamf1
T4147 396-404 CHEBI_PR_EXT:protein denotes proteins
T4146 383-395 GO:0009986 denotes cell surface
T4145 376-387 CL:0000738 denotes immune cell
T4144 376-382 UBERON:0002405 denotes immune
T4143 343-350 UBERON:0000479 denotes tissues
T4142 334-342 GO_PATO_EXT:inflammatory_process_or_quality denotes inflamed
T4141 311-315 CL_GO_EXT:cell denotes cell
T4140 304-315 CL:0000738 denotes immune cell
T4139 304-310 UBERON:0002405 denotes immune
T4138 266-270 GO_SO_EXT:chromosome denotes chr.
T4137 260-264 PR_EXT:000001432 denotes Selp
T4136 254-258 PR_EXT:000001318 denotes Sell
T4135 248-252 PR_EXT:000001415 denotes Sele
T4134 241-246 SO_EXT:0000704 denotes genes
T4133 232-240 PR_EXT:selectin denotes selectin
T4132 201-205 CL_GO_EXT:cell denotes cell
T4131 199-216 GO:0042110 denotes T cell activation
T4130 199-205 CL:0000084 denotes T cell
T4129 158-162 GO_SO_EXT:chromosome denotes chr.
T4128 140-146 PR_EXT:000001949 denotes Tnfsf4
T4127 116-119 PR_EXT:tumor_necrosis_factor denotes TNF
T4126 96-103 CHEBI_SO_EXT:molecular_indicator_or_label_or_marker_or_tag denotes markers
T4125 48-61 UBERON:0002405 denotes immune system
T4124 27-39 GO_PATO_EXT:inflammatory_process_or_quality denotes inflammation
T4123 9-14 SO_EXT:0000704 denotes genes
R2533 T4212 T4211 _lexicallyChainedTo IL-10 interleukin family,member of

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T4015 1541-1573 GO:0035556 denotes intracellular signaling pathways
T4014 1541-1554 GO:0005622 denotes intracellular
T4013 1485-1490 SO:0000704 denotes genes
T4012 1473-1478 PR:000002088 denotes Stat2
T4011 1434-1458 PR:000001335 denotes IL-10 interleukin family
T4010 1402-1411 _FRAGMENT denotes member of
T4009 1378-1382 PR:000001383 denotes Il22
T4008 1275-1279 PR:000000017 denotes Ifng
T4007 1260-1268 NCBITaxon:2 denotes bacteria
T4006 1246-1256 GO:0005618 denotes cell walls
T4005 1213-1224 CL:0000510 denotes Paneth cell
T4004 1181-1185 PR:000010030 denotes Lyzs
T4003 1151-1159 GO:0042571 denotes antibody
T4002 1083-1103 GO:0030154 denotes cell differentiation
T4001 1078-1087 CL:0000097 denotes mast cell
T4000 1041-1057 PR:000009345 denotes stem cell factor
T3999 1041-1050 CL:0000034 denotes stem cell
T3998 997-1001 PR:000009345 denotes Kitl
T3997 983-990 UBERON:0000479 denotes tissues
T3996 945-955 CL:0000542 denotes lymphocyte
T3995 904-909 PR:000001467 denotes Icam1
T3994 887-896 CHEBI:82761 denotes defensins
T3993 854-865 CL:0000510 denotes Paneth cell
T3992 819-823 PR:000010489 denotes Mmp7
T3991 801-812 CL:0000542 denotes lymphocytes
T3990 796-799 PR:000001004 denotes CD4
T3989 762-766 PR:000010488 denotes Mmp3
T3988 741-745 PR:000001156 denotes Tlr5
T3987 691-697 PR:000007431 denotes Fcer1a
T3986 665-671 PR:000007432 denotes Fcer1g
T3985 640-645 PR:000001483 denotes Fcgr3
T3984 628-634 PR:000001481 denotes Fcgr2b
T3983 621-626 PR:000007442 denotes Fcrl3
T3982 614-619 SO:0000704 denotes genes
T3981 587-601 GO:0019814 denotes immunoglobulin
T3980 561-572 CL:0000542 denotes lymphocytes
T3979 537-547 CL:0000097 denotes mast cells
T3978 524-533 GO:0010467 denotes expressed
T3977 495-499 PR:000002140 denotes Xcl1
T3976 490-494 SO:0000704 denotes gene
T3975 425-431 PR:000001833 denotes slamf1
T3974 383-395 GO:0009986 denotes cell surface
T3973 376-387 CL:0000738 denotes immune cell
T3972 376-382 UBERON:0002405 denotes immune
T3971 343-350 UBERON:0000479 denotes tissues
T3970 304-315 CL:0000738 denotes immune cell
T3969 304-310 UBERON:0002405 denotes immune
T3968 260-264 PR:000001432 denotes Selp
T3967 254-258 PR:000001318 denotes Sell
T3966 248-252 PR:000001415 denotes Sele
T3965 241-246 SO:0000704 denotes genes
T3964 199-216 GO:0042110 denotes T cell activation
T3963 199-205 CL:0000084 denotes T cell
T3962 140-146 PR:000001949 denotes Tnfsf4
T3961 48-61 UBERON:0002405 denotes immune system
T3960 9-14 SO:0000704 denotes genes
R2530 T4011 T4010 _lexicallyChainedTo IL-10 interleukin family,member of