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PMC:1166548 / 140-893 JSONTXT

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craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T37 114-118 SO:0000704 denotes gene
T38 200-205 SO:0000704 denotes genes
T39 211-221 UBERON:0000160 denotes intestines
T40 225-229 PR:000001044 denotes Cftr
T41 240-244 NCBITaxon:10088 denotes mice
T42 249-253 NCBITaxon:10088 denotes mice
T43 255-259 PR:000001044 denotes Cftr
T44 305-310 UBERON:0000912 denotes mucus
T45 351-359 UBERON:0007109 denotes meconium
T46 377-387 UBERON:0000160 denotes intestinal
T47 454-461 SO:0000704 denotes genetic
T48 480-484 NCBITaxon:10088 denotes mice
T49 532-536 NCBITaxon:10088 denotes mice
T50 561-566 NCBITaxon:10088 denotes mouse
T51 567-571 CHEBI:33290 denotes chow
T52 598-613 UBERON:0002108 denotes small intestine
T53 716-726 UBERON:0000160 denotes intestinal
T33 55-106 PR:000001044 denotes cystic fibrosis transmembrane conductance regulator
T34 71-96 GO:0055085 denotes transmembrane conductance
T35 76-84 GO:0016020 denotes membrane
T36 108-112 PR:000001044 denotes CFTR

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T79 38-47 SO_EXT:sequence_alteration_entity_or_process denotes mutations
T80 55-106 PR_EXT:000001044 denotes cystic fibrosis transmembrane conductance regulator
T81 71-96 GO:0055085 denotes transmembrane conductance
T82 76-84 GO:0016020 denotes membrane
T83 97-106 GO_EXT:regulator denotes regulator
T84 108-112 PR_EXT:000001044 denotes CFTR
T85 114-118 SO_EXT:0000704 denotes gene
T86 200-205 SO_EXT:0000704 denotes genes
T87 211-221 UBERON:0000160 denotes intestines
T88 225-229 PR_EXT:000001044 denotes Cftr
T89 240-244 NCBITaxon:10088 denotes mice
T90 249-253 NCBITaxon:10088 denotes mice
T91 255-259 PR_EXT:000001044 denotes Cftr
T92 305-310 UBERON:0000912 denotes mucus
T93 351-359 UBERON:0007109 denotes meconium
T94 377-387 UBERON:0000160 denotes intestinal
T95 454-461 SO_EXT:0000704 denotes genetic
T96 480-484 NCBITaxon:10088 denotes mice
T97 532-536 NCBITaxon:10088 denotes mice
T98 561-566 NCBITaxon:10088 denotes mouse
T99 567-571 CHEBI_EXT:33290 denotes chow
T100 578-590 GO_PATO_EXT:inflammatory_process_or_quality denotes inflammation
T101 598-613 UBERON:0002108 denotes small intestine
T102 646-655 SO_EXT:wild_type_entity_or_quality denotes wild type
T103 716-726 UBERON:0000160 denotes intestinal

craft-sa-dev

Id Subject Object Predicate Lexical cue
T163 0-8 IN denotes Although
T164 28-34 VBN denotes caused
T165 9-15 JJ denotes cystic
T166 16-24 NN denotes fibrosis
T167 25-27 VBZ denotes is
T168 144-146 VBZ denotes is
T169 35-37 IN denotes by
T170 38-47 NNS denotes mutations
T171 48-50 IN denotes in
T172 51-54 DT denotes the
T173 114-118 NN denotes gene
T174 55-61 JJ denotes cystic
T175 97-106 NN denotes regulator
T176 62-70 NN denotes fibrosis
T177 71-84 JJ denotes transmembrane
T178 85-96 NN denotes conductance
T179 107-108 -LRB- denotes (
T180 108-112 NN denotes CFTR
T181 112-113 -RRB- denotes )
T182 118-120 , denotes ,
T183 120-123 DT denotes the
T184 124-132 NN denotes severity
T185 133-135 IN denotes of
T186 136-143 NN denotes disease
T187 147-153 RB denotes highly
T188 154-162 JJ denotes variable
T189 163-173 VBG denotes indicating
T190 174-177 DT denotes the
T191 178-187 NN denotes influence
T192 188-190 IN denotes of
T193 191-199 NN denotes modifier
T194 200-205 NNS denotes genes
T195 205-206 . denotes .
T196 206-409 sentence denotes The intestines of Cftr deficient mice (CF mice: Cftrtm1Unc) are prone to obstruction by excessive mucus accumulation and are used as a model of meconium ileus and distal intestinal obstruction syndrome.
T197 207-210 DT denotes The
T198 211-221 NNS denotes intestines
T199 267-270 VBP denotes are
T200 222-224 IN denotes of
T201 225-229 NN denotes Cftr
T202 230-239 JJ denotes deficient
T203 240-244 NNS denotes mice
T204 245-246 -LRB- denotes (
T205 246-248 NN denotes CF
T206 249-253 NNS denotes mice
T207 253-255 : denotes :
T208 255-265 NN denotes Cftrtm1Unc
T209 265-266 -RRB- denotes )
T210 271-276 JJ denotes prone
T211 277-279 IN denotes to
T212 280-291 NN denotes obstruction
T213 292-294 IN denotes by
T214 295-304 JJ denotes excessive
T215 311-323 NN denotes accumulation
T216 305-310 NN denotes mucus
T217 324-327 CC denotes and
T218 328-331 VBP denotes are
T219 332-336 VBN denotes used
T220 337-339 IN denotes as
T221 340-341 DT denotes a
T222 342-347 NN denotes model
T223 348-350 IN denotes of
T224 351-359 NN denotes meconium
T225 360-365 NN denotes ileus
T226 366-369 CC denotes and
T227 370-376 JJ denotes distal
T228 388-399 NN denotes obstruction
T229 377-387 JJ denotes intestinal
T230 400-408 NN denotes syndrome
T231 408-409 . denotes .
T232 409-485 sentence denotes This phenotype is strongly dependent on the genetic background of the mice.
T233 410-414 DT denotes This
T234 415-424 NN denotes phenotype
T235 425-427 VBZ denotes is
T236 428-436 RB denotes strongly
T237 437-446 JJ denotes dependent
T238 447-449 IN denotes on
T239 450-453 DT denotes the
T240 462-472 NN denotes background
T241 454-461 JJ denotes genetic
T242 473-475 IN denotes of
T243 476-479 DT denotes the
T244 480-484 NNS denotes mice
T245 484-485 . denotes .
T246 485-668 sentence denotes On the C57Bl/6 background, the majority of CF mice cannot survive on solid mouse chow, have inflammation of the small intestine, and are about 30% smaller than wild type littermates.
T247 486-488 IN denotes On
T248 544-551 VB denotes survive
T249 489-492 DT denotes the
T250 501-511 NN denotes background
T251 493-498 NN denotes C57Bl
T252 498-499 HYPH denotes /
T253 499-500 CD denotes 6
T254 511-513 , denotes ,
T255 513-516 DT denotes the
T256 517-525 NN denotes majority
T257 526-528 IN denotes of
T258 529-531 NN denotes CF
T259 532-536 NNS denotes mice
T260 537-540 MD denotes can
T261 540-543 RB denotes not
T262 552-554 IN denotes on
T263 555-560 JJ denotes solid
T264 567-571 NN denotes chow
T265 561-566 NN denotes mouse
T266 571-573 , denotes ,
T267 573-577 VBP denotes have
T268 578-590 NN denotes inflammation
T269 591-593 IN denotes of
T270 594-597 DT denotes the
T271 604-613 NN denotes intestine
T272 598-603 JJ denotes small
T273 613-615 , denotes ,
T274 615-618 CC denotes and
T275 619-622 VBP denotes are
T276 623-628 IN denotes about
T277 629-631 CD denotes 30
T278 631-632 NN denotes %
T279 633-640 JJR denotes smaller
T280 641-645 IN denotes than
T281 646-650 JJ denotes wild
T282 651-655 NN denotes type
T283 656-667 NNS denotes littermates
T284 667-668 . denotes .
T285 668-753 sentence denotes In this work potential modifier loci of the CF intestinal phenotype were identified.
T286 669-671 IN denotes In
T287 742-752 VBN denotes identified
T288 672-676 DT denotes this
T289 677-681 NN denotes work
T290 682-691 NN denotes potential
T291 701-705 NNS denotes loci
T292 692-700 NN denotes modifier
T293 706-708 IN denotes of
T294 709-712 DT denotes the
T295 727-736 NN denotes phenotype
T296 713-715 NN denotes CF
T297 716-726 JJ denotes intestinal
T298 737-741 VBD denotes were
T299 752-753 . denotes .
R79 T227 T228 amod distal,obstruction
R18 T163 T164 mark Although,caused
R19 T164 T168 advcl caused,is
R23 T169 T164 agent by,caused
R24 T170 T169 pobj mutations,by
R25 T171 T170 prep in,mutations
R26 T172 T173 det the,gene
R27 T173 T171 pobj gene,in
R29 T175 T173 nmod regulator,gene
R30 T176 T175 nmod fibrosis,regulator
R31 T177 T175 amod transmembrane,regulator
R32 T178 T175 nmod conductance,regulator
R36 T182 T168 punct ", ",is
R37 T183 T184 det the,severity
R38 T184 T168 nsubj severity,is
R39 T185 T184 prep of,severity
R40 T186 T185 pobj disease,of
R41 T187 T188 advmod highly,variable
R42 T188 T168 acomp variable,is
R43 T189 T168 advcl indicating,is
R44 T190 T191 det the,influence
R45 T191 T189 dobj influence,indicating
R46 T192 T191 prep of,influence
R47 T193 T194 compound modifier,genes
R48 T194 T192 pobj genes,of
R49 T195 T168 punct .,is
R50 T197 T198 det The,intestines
R51 T198 T199 nsubj intestines,are
R52 T200 T198 prep of,intestines
R53 T201 T202 npadvmod Cftr,deficient
R54 T202 T203 amod deficient,mice
R55 T203 T200 pobj mice,of
R56 T204 T203 punct (,mice
R57 T205 T206 compound CF,mice
R58 T206 T203 appos mice,mice
R59 T207 T206 punct : ,mice
R60 T208 T206 appos Cftrtm1Unc,mice
R61 T209 T199 punct ),are
R62 T210 T199 acomp prone,are
R63 T211 T210 prep to,prone
R64 T212 T211 pobj obstruction,to
R65 T213 T212 prep by,obstruction
R66 T214 T215 amod excessive,accumulation
R67 T215 T213 pobj accumulation,by
R69 T217 T199 cc and,are
R70 T218 T219 auxpass are,used
R71 T219 T199 conj used,are
R72 T220 T219 prep as,used
R73 T221 T222 det a,model
R74 T222 T220 pobj model,as
R75 T223 T222 prep of,model
R76 T224 T225 compound meconium,ileus
R77 T225 T223 pobj ileus,of
R78 T226 T225 cc and,ileus
R80 T228 T230 compound obstruction,syndrome
R82 T230 T225 conj syndrome,ileus
R83 T231 T199 punct .,are
R84 T233 T234 det This,phenotype
R85 T234 T235 nsubj phenotype,is
R86 T236 T237 advmod strongly,dependent
R87 T237 T235 acomp dependent,is
R88 T238 T237 prep on,dependent
R89 T239 T240 det the,background
R90 T240 T238 pobj background,on
R92 T242 T240 prep of,background
R93 T243 T244 det the,mice
R94 T244 T242 pobj mice,of
R95 T245 T235 punct .,is
R96 T247 T248 prep On,survive
R97 T249 T250 det the,background
R98 T250 T247 pobj background,On
R102 T254 T248 punct ", ",survive
R103 T255 T256 det the,majority
R104 T256 T248 nsubj majority,survive
R105 T257 T256 prep of,majority
R106 T258 T259 compound CF,mice
R107 T259 T257 pobj mice,of
R108 T260 T248 aux can,survive
R109 T261 T248 neg not,survive
R110 T262 T248 prep on,survive
R111 T263 T264 amod solid,chow
R112 T264 T262 pobj chow,on
R114 T266 T248 punct ", ",survive
R115 T267 T248 conj have,survive
R116 T268 T267 dobj inflammation,have
R117 T269 T268 prep of,inflammation
R118 T270 T271 det the,intestine
R119 T271 T269 pobj intestine,of
R121 T273 T267 punct ", ",have
R122 T274 T267 cc and,have
R123 T275 T267 conj are,have
R124 T276 T277 quantmod about,30
R125 T277 T278 nummod 30,%
R126 T278 T279 npadvmod %,smaller
R127 T279 T275 acomp smaller,are
R128 T280 T279 prep than,smaller
R129 T281 T282 amod wild,type
R130 T282 T283 compound type,littermates
R131 T283 T280 pobj littermates,than
R132 T284 T248 punct .,survive
R133 T286 T287 prep In,identified
R134 T288 T289 det this,work
R135 T289 T286 pobj work,In
R136 T290 T291 compound potential,loci
R137 T291 T287 nsubjpass loci,identified
R139 T293 T291 prep of,loci
R140 T294 T295 det the,phenotype
R141 T295 T293 pobj phenotype,of
R144 T298 T287 auxpass were,identified
R145 T299 T287 punct .,identified
R20 T165 T166 amod cystic,fibrosis
R21 T166 T164 nsubjpass fibrosis,caused
R22 T167 T164 auxpass is,caused
R28 T174 T175 amod cystic,regulator
R33 T179 T175 punct (,regulator
R34 T180 T175 appos CFTR,regulator
R35 T181 T173 punct ),gene
R68 T216 T215 compound mucus,accumulation
R81 T229 T228 amod intestinal,obstruction
R91 T241 T240 amod genetic,background
R99 T251 T250 nmod C57Bl,background
R100 T252 T251 punct /,C57Bl
R101 T253 T251 nummod 6,C57Bl
R113 T265 T264 compound mouse,chow
R120 T272 T271 amod small,intestine
R138 T292 T291 compound modifier,loci
R142 T296 T295 nmod CF,phenotype
R143 T297 T295 amod intestinal,phenotype