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PMC:1166548 / 10736-14406 JSONTXT

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Id Subject Object Predicate Lexical cue
T2802 0-2 NN denotes CF
T2803 3-7 NNS denotes mice
T2804 32-36 VBP denotes have
T2805 8-10 IN denotes on
T2806 11-14 DT denotes the
T2807 21-31 NN denotes background
T2808 15-20 JJ denotes mixed
T2809 37-41 RBR denotes less
T2810 59-71 NN denotes accumulation
T2811 42-52 JJ denotes intestinal
T2812 53-58 NN denotes mucus
T2813 71-315 sentence denotes The most striking histological difference in the CF mouse small intestine is the accumulation of mucus in intestinal crypts which is associated with the lethal obstruction that results in death of these mice on a standard solid chow diet [32].
T2814 72-75 DT denotes The
T2815 103-113 NN denotes difference
T2816 76-80 RBS denotes most
T2817 81-89 JJ denotes striking
T2818 90-102 JJ denotes histological
T2819 146-148 VBZ denotes is
T2820 114-116 IN denotes in
T2821 117-120 DT denotes the
T2822 136-145 NN denotes intestine
T2823 121-123 NN denotes CF
T2824 124-129 NN denotes mouse
T2825 130-135 JJ denotes small
T2826 149-152 DT denotes the
T2827 153-165 NN denotes accumulation
T2828 166-168 IN denotes of
T2829 169-174 NN denotes mucus
T2830 175-177 IN denotes in
T2831 178-188 JJ denotes intestinal
T2832 189-195 NNS denotes crypts
T2833 196-201 WDT denotes which
T2834 205-215 VBN denotes associated
T2835 202-204 VBZ denotes is
T2836 216-220 IN denotes with
T2837 221-224 DT denotes the
T2838 232-243 NN denotes obstruction
T2839 225-231 JJ denotes lethal
T2840 244-248 WDT denotes that
T2841 249-256 VBZ denotes results
T2842 257-259 IN denotes in
T2843 260-265 NN denotes death
T2844 266-268 IN denotes of
T2845 269-274 DT denotes these
T2846 275-279 NNS denotes mice
T2847 280-282 IN denotes on
T2848 283-284 DT denotes a
T2849 305-309 NN denotes diet
T2850 285-293 JJ denotes standard
T2851 294-299 JJ denotes solid
T2852 300-304 NN denotes chow
T2853 310-311 -LRB- denotes [
T2854 311-313 CD denotes 32
T2855 313-314 -RRB- denotes ]
T2856 314-315 . denotes .
T2857 315-437 sentence denotes Using periodic acid Schiff's staining for neutral mucins, histological analysis of small intestine tissues was performed.
T2858 316-321 VBG denotes Using
T2859 427-436 VBN denotes performed
T2860 322-330 JJ denotes periodic
T2861 331-335 NN denotes acid
T2862 345-353 NN denotes staining
T2863 336-342 NNP denotes Schiff
T2864 342-344 POS denotes 's
T2865 354-357 IN denotes for
T2866 358-365 JJ denotes neutral
T2867 366-372 NNS denotes mucins
T2868 372-374 , denotes ,
T2869 374-386 JJ denotes histological
T2870 387-395 NN denotes analysis
T2871 396-398 IN denotes of
T2872 399-404 JJ denotes small
T2873 415-422 NNS denotes tissues
T2874 405-414 NN denotes intestine
T2875 423-426 VBD denotes was
T2876 436-437 . denotes .
T2877 437-530 sentence denotes The wild type small intestine on both the B6 and the mixed genetic backgrounds were similar.
T2878 438-441 DT denotes The
T2879 458-467 NN denotes intestine
T2880 442-446 JJ denotes wild
T2881 447-451 NN denotes type
T2882 452-457 JJ denotes small
T2883 517-521 VBD denotes were
T2884 468-470 IN denotes on
T2885 471-475 CC denotes both
T2886 480-482 NN denotes B6
T2887 476-479 DT denotes the
T2888 483-486 CC denotes and
T2889 487-490 DT denotes the
T2890 491-496 JJ denotes mixed
T2891 505-516 NNS denotes backgrounds
T2892 497-504 JJ denotes genetic
T2893 522-529 JJ denotes similar
T2894 529-530 . denotes .
T2895 530-648 sentence denotes The intestinal crypts were very small with only traces of PAS-reactivity in the lumen (Fig. 3A and 3C, respectively).
T2896 531-534 DT denotes The
T2897 546-552 NNS denotes crypts
T2898 535-545 JJ denotes intestinal
T2899 553-557 VBD denotes were
T2900 558-562 RB denotes very
T2901 563-568 JJ denotes small
T2902 569-573 IN denotes with
T2903 574-578 JJ denotes only
T2904 579-585 NNS denotes traces
T2905 586-588 IN denotes of
T2906 589-592 NN denotes PAS
T2907 593-603 NN denotes reactivity
T2908 592-593 HYPH denotes -
T2909 604-606 IN denotes in
T2910 607-610 DT denotes the
T2911 611-616 NN denotes lumen
T2912 617-618 -LRB- denotes (
T2913 623-625 CD denotes 3A
T2914 618-622 NN denotes Fig.
T2915 626-629 CC denotes and
T2916 630-632 CD denotes 3C
T2917 632-634 , denotes ,
T2918 634-646 RB denotes respectively
T2919 646-647 -RRB- denotes )
T2920 647-648 . denotes .
T2921 648-775 sentence denotes The surfaces of the villus epithelium were moderately stained and goblet cells were strongly stained in the wild type tissues.
T2922 649-652 DT denotes The
T2923 653-661 NNS denotes surfaces
T2924 687-691 VBD denotes were
T2925 662-664 IN denotes of
T2926 665-668 DT denotes the
T2927 676-686 NN denotes epithelium
T2928 669-675 NN denotes villus
T2929 692-702 RB denotes moderately
T2930 703-710 JJ denotes stained
T2931 711-714 CC denotes and
T2932 715-721 NN denotes goblet
T2933 722-727 NNS denotes cells
T2934 742-749 VBN denotes stained
T2935 728-732 VBD denotes were
T2936 733-741 RB denotes strongly
T2937 750-752 IN denotes in
T2938 753-756 DT denotes the
T2939 767-774 NNS denotes tissues
T2940 757-761 JJ denotes wild
T2941 762-766 NN denotes type
T2942 774-775 . denotes .
T2943 775-917 sentence denotes In contrast, the intestine of CF mice on the B6 genetic background exhibited greatly dilated crypts filled with PAS-reactive mucus (Fig. 3B).
T2944 776-778 IN denotes In
T2945 843-852 VBD denotes exhibited
T2946 779-787 NN denotes contrast
T2947 787-789 , denotes ,
T2948 789-792 DT denotes the
T2949 793-802 NN denotes intestine
T2950 803-805 IN denotes of
T2951 806-808 NN denotes CF
T2952 809-813 NNS denotes mice
T2953 814-816 IN denotes on
T2954 817-820 DT denotes the
T2955 832-842 NN denotes background
T2956 821-823 NN denotes B6
T2957 824-831 JJ denotes genetic
T2958 853-860 RB denotes greatly
T2959 861-868 VBN denotes dilated
T2960 869-875 NNS denotes crypts
T2961 876-882 VBN denotes filled
T2962 883-887 IN denotes with
T2963 888-891 NN denotes PAS
T2964 892-900 JJ denotes reactive
T2965 891-892 HYPH denotes -
T2966 901-906 NN denotes mucus
T2967 907-908 -LRB- denotes (
T2968 908-912 NN denotes Fig.
T2969 913-915 CD denotes 3B
T2970 915-916 -RRB- denotes )
T2971 916-917 . denotes .
T2972 917-1024 sentence denotes CF mice on the mixed background had less mucus accumulation than CF mice on the B6 background (Fig. 3D-F).
T2973 918-920 NN denotes CF
T2974 921-925 NNS denotes mice
T2975 950-953 VBD denotes had
T2976 926-928 IN denotes on
T2977 929-932 DT denotes the
T2978 939-949 NN denotes background
T2979 933-938 JJ denotes mixed
T2980 954-958 JJ denotes less
T2981 965-977 NN denotes accumulation
T2982 959-964 NN denotes mucus
T2983 978-982 IN denotes than
T2984 983-985 NN denotes CF
T2985 986-990 NNS denotes mice
T2986 991-993 IN denotes on
T2987 994-997 DT denotes the
T2988 1001-1011 NN denotes background
T2989 998-1000 NN denotes B6
T2990 1012-1013 -LRB- denotes (
T2991 1013-1017 NN denotes Fig.
T2992 1018-1020 CD denotes 3D
T2993 1020-1021 SYM denotes -
T2994 1021-1022 NN denotes F
T2995 1022-1023 -RRB- denotes )
T2996 1023-1024 . denotes .
T2997 1024-1113 sentence denotes The amount of mucus in CF mice on the mixed background was variable from mouse to mouse.
T2998 1025-1028 DT denotes The
T2999 1029-1035 NN denotes amount
T3000 1080-1083 VBD denotes was
T3001 1036-1038 IN denotes of
T3002 1039-1044 NN denotes mucus
T3003 1045-1047 IN denotes in
T3004 1048-1050 NN denotes CF
T3005 1051-1055 NNS denotes mice
T3006 1056-1058 IN denotes on
T3007 1059-1062 DT denotes the
T3008 1069-1079 NN denotes background
T3009 1063-1068 JJ denotes mixed
T3010 1084-1092 JJ denotes variable
T3011 1093-1097 IN denotes from
T3012 1098-1103 NN denotes mouse
T3013 1104-1106 IN denotes to
T3014 1107-1112 NN denotes mouse
T3015 1112-1113 . denotes .
T3016 1113-1226 sentence denotes In some mice (Fig. 3D), only occasional crypts had accumulated mucus and the crypt lumina were not very dilated.
T3017 1114-1116 IN denotes In
T3018 1165-1176 VBN denotes accumulated
T3019 1117-1121 DT denotes some
T3020 1122-1126 NNS denotes mice
T3021 1127-1128 -LRB- denotes (
T3022 1128-1132 NN denotes Fig.
T3023 1133-1135 CD denotes 3D
T3024 1135-1136 -RRB- denotes )
T3025 1136-1138 , denotes ,
T3026 1138-1142 RB denotes only
T3027 1154-1160 NNS denotes crypts
T3028 1143-1153 JJ denotes occasional
T3029 1161-1164 VBD denotes had
T3030 1177-1182 NN denotes mucus
T3031 1183-1186 CC denotes and
T3032 1187-1190 DT denotes the
T3033 1197-1203 NNS denotes lumina
T3034 1191-1196 NN denotes crypt
T3035 1204-1208 VBD denotes were
T3036 1209-1212 RB denotes not
T3037 1213-1217 RB denotes very
T3038 1218-1225 JJ denotes dilated
T3039 1225-1226 . denotes .
T3040 1226-1341 sentence denotes In some mice there was more mucus in the crypts (Fig. 3E), while others had moderate mucus accumulation (Fig. 3F).
T3041 1227-1229 IN denotes In
T3042 1246-1249 VBD denotes was
T3043 1230-1234 DT denotes some
T3044 1235-1239 NNS denotes mice
T3045 1240-1245 EX denotes there
T3046 1250-1254 JJR denotes more
T3047 1255-1260 NN denotes mucus
T3048 1261-1263 IN denotes in
T3072 1353-1356 CD denotes six
T3073 1360-1364 NNS denotes mice
T3074 1357-1359 NN denotes CF
T3075 1365-1367 IN denotes on
T3076 1368-1371 DT denotes the
T3077 1378-1388 NN denotes background
T3078 1372-1377 JJ denotes mixed
T3079 1389-1393 VBD denotes were
T3080 1403-1417 RB denotes histologically
T3081 1417-1419 , denotes ,
T3082 1419-1422 CC denotes and
T3083 1423-1428 CD denotes three
T3084 1429-1432 VBD denotes had
T3085 1433-1439 JJ denotes little
T3086 1440-1445 NN denotes mucus
T3087 1445-1447 , denotes ,
T3088 1447-1450 CD denotes one
T3089 1451-1454 VBD denotes had
T3090 1455-1459 DT denotes some
T3091 1460-1465 NN denotes mucus
T3092 1465-1467 , denotes ,
T3093 1467-1470 CC denotes and
T3094 1471-1474 CD denotes two
T3095 1475-1478 VBD denotes had
T3096 1479-1487 JJ denotes moderate
T3097 1488-1495 NNS denotes amounts
T3098 1496-1498 IN denotes of
T3099 1499-1504 NN denotes mucus
T3100 1504-1505 . denotes .
T3101 1505-1664 sentence denotes Despite the variability, all the CF mice on the mixed background had less crypt dilation and less mucus accumulation compared to CF mice on the B6 background.
T3102 1506-1513 IN denotes Despite
T3103 1571-1574 VBD denotes had
T3104 1514-1517 DT denotes the
T3105 1518-1529 NN denotes variability
T3106 1529-1531 , denotes ,
T3107 1531-1534 PDT denotes all
T3108 1542-1546 NNS denotes mice
T3109 1535-1538 DT denotes the
T3110 1539-1541 NN denotes CF
T3111 1547-1549 IN denotes on
T3112 1550-1553 DT denotes the
T3113 1560-1570 NN denotes background
T3114 1554-1559 JJ denotes mixed
T3115 1575-1579 JJ denotes less
T3116 1586-1594 NN denotes dilation
T3117 1580-1585 NN denotes crypt
T3118 1595-1598 CC denotes and
T3119 1599-1603 JJ denotes less
T3120 1610-1622 NN denotes accumulation
T3121 1604-1609 NN denotes mucus
T3122 1623-1631 VBN denotes compared
T3123 1632-1634 IN denotes to
T3124 1635-1637 NN denotes CF
T3125 1638-1642 NNS denotes mice
T3126 1643-1645 IN denotes on
T3127 1646-1649 DT denotes the
T3128 1653-1663 NN denotes background
T3129 1650-1652 NN denotes B6
T3130 1663-1664 . denotes .
T3133 2696-2703 VBZ denotes appears
T3134 2691-2693 , denotes ,
T3135 2693-2695 PRP denotes it
T3136 2704-2708 IN denotes that
T3137 2797-2803 VBP denotes affect
T3138 2709-2717 WDT denotes whatever
T3139 2722-2728 NN denotes nature
T3140 2718-2721 DT denotes the
T3141 2729-2731 IN denotes of
T3142 2732-2735 DT denotes the
T3143 2744-2755 NNS denotes differences
T3144 2736-2743 JJ denotes genetic
T3145 2756-2763 IN denotes between
T3146 2764-2767 DT denotes the
T3147 2783-2790 NNS denotes strains
T3148 2768-2771 CD denotes two
T3149 2772-2782 NN denotes background
T3150 2790-2792 , denotes ,
T3151 2792-2796 PRP denotes they
T3152 2804-2813 NN denotes secretion
T3153 2814-2817 CC denotes and
T3154 2818-2830 NN denotes accumulation
T3155 2831-2833 IN denotes of
T3156 2834-2839 NN denotes mucus
T3157 2840-2842 IN denotes in
T3158 2843-2846 DT denotes the
T3159 2856-2865 NN denotes intestine
T3160 2847-2849 NN denotes CF
T3161 2850-2855 JJ denotes small
T3162 2865-2866 . denotes .
T3163 2866-3058 sentence denotes To determine if the difference could be accounted for by altered mucin gene expression, quantitative RT-PCR was used to measure mRNA expression of the intestinal goblet cell mucin gene, Muc2.
T3164 2867-2869 TO denotes To
T3165 2870-2879 VB denotes determine
T3166 2979-2983 VBN denotes used
T3167 2880-2882 IN denotes if
T3168 2907-2916 VBN denotes accounted
T3169 2883-2886 DT denotes the
T3170 2887-2897 NN denotes difference
T3171 2898-2903 MD denotes could
T3172 2904-2906 VB denotes be
T3173 2917-2920 IN denotes for
T3174 2921-2923 IN denotes by
T3175 2924-2931 JJ denotes altered
T3176 2938-2942 NN denotes gene
T3177 2932-2937 NN denotes mucin
T3178 2943-2953 NN denotes expression
T3179 2953-2955 , denotes ,
T3180 2955-2967 JJ denotes quantitative
T3181 2971-2974 NN denotes PCR
T3182 2968-2970 NN denotes RT
T3183 2970-2971 HYPH denotes -
T3184 2975-2978 VBD denotes was
T3185 2984-2986 TO denotes to
T3186 2987-2994 VB denotes measure
T3187 2995-2999 NN denotes mRNA
T3188 3000-3010 NN denotes expression
T3189 3011-3013 IN denotes of
T3190 3014-3017 DT denotes the
T3191 3047-3051 NN denotes gene
T3192 3018-3028 JJ denotes intestinal
T3193 3036-3040 NN denotes cell
T3194 3029-3035 NN denotes goblet
T3195 3041-3046 NN denotes mucin
T3196 3051-3053 , denotes ,
T3197 3053-3057 NN denotes Muc2
T3198 3057-3058 . denotes .
T3199 3058-3208 sentence denotes In wild type intestine, B6 mice had 0.079 +/- 0.024 copies of Muc2/GAPDH (n = 8), and on the mixed background the level was 0.077 +/- 0.012 (n = 11).
T3200 3059-3061 IN denotes In
T3201 3091-3094 VBD denotes had
T3202 3062-3066 JJ denotes wild
T3203 3067-3071 NN denotes type
T3204 3072-3081 NN denotes intestine
T3205 3081-3083 , denotes ,
T3206 3083-3085 NN denotes B6
T3207 3086-3090 NNS denotes mice
T3208 3095-3100 CD denotes 0.079
T3209 3105-3110 CD denotes 0.024
T3210 3101-3102 SYM denotes +
T3211 3102-3103 HYPH denotes /
T3212 3103-3104 SYM denotes -
T3213 3111-3117 NNS denotes copies
T3214 3118-3120 IN denotes of
T3215 3121-3125 NN denotes Muc2
T3216 3126-3131 NN denotes GAPDH
T3217 3125-3126 HYPH denotes /
T3218 3132-3133 -LRB- denotes (
T3219 3137-3138 CD denotes 8
T3220 3133-3134 NN denotes n
T3221 3135-3136 SYM denotes =
T3222 3138-3139 -RRB- denotes )
T3223 3139-3141 , denotes ,
T3224 3141-3144 CC denotes and
T3225 3145-3147 IN denotes on
T3226 3179-3182 VBD denotes was
T3227 3148-3151 DT denotes the
T3228 3158-3168 NN denotes background
T3229 3152-3157 JJ denotes mixed
T3230 3169-3172 DT denotes the
T3231 3173-3178 NN denotes level
T3232 3183-3188 CD denotes 0.077
T3233 3193-3198 CD denotes 0.012
T3234 3189-3190 SYM denotes +
T3235 3190-3191 HYPH denotes /
T3236 3191-3192 SYM denotes -
T3237 3199-3200 -LRB- denotes (
T3238 3204-3206 CD denotes 11
T3239 3200-3201 NN denotes n
T3240 3202-3203 SYM denotes =
T3241 3206-3207 -RRB- denotes )
T3242 3207-3208 . denotes .
T3243 3208-3365 sentence denotes CF mice on the B6 background had 0.059 +/- 0.024 copies of Muc2 mRNA per GAPDH (n = 11), and on the mixed background the level was 0.056 +/- 0.010 (n = 11).
T3244 3209-3211 NN denotes CF
T3245 3212-3216 NNS denotes mice
T3246 3238-3241 VBD denotes had
T3247 3217-3219 IN denotes on
T3248 3220-3223 DT denotes the
T3249 3227-3237 NN denotes background
T3250 3224-3226 NN denotes B6
T3251 3242-3247 CD denotes 0.059
T3252 3252-3257 CD denotes 0.024
T3253 3248-3249 SYM denotes +
T3254 3249-3250 HYPH denotes /
T3255 3250-3251 SYM denotes -
T3256 3258-3264 NNS denotes copies
T3257 3265-3267 IN denotes of
T3258 3268-3272 NN denotes Muc2
T3259 3273-3277 NN denotes mRNA
T3260 3278-3281 IN denotes per
T3261 3282-3287 NN denotes GAPDH
T3262 3288-3289 -LRB- denotes (
T3263 3293-3295 CD denotes 11
T3264 3289-3290 NN denotes n
T3265 3291-3292 SYM denotes =
T3266 3295-3296 -RRB- denotes )
T3267 3296-3298 , denotes ,
T3268 3298-3301 CC denotes and
T3269 3302-3304 IN denotes on
T3270 3336-3339 VBD denotes was
T3271 3305-3308 DT denotes the
T3272 3315-3325 NN denotes background
T3273 3309-3314 JJ denotes mixed
T3274 3326-3329 DT denotes the
T3275 3330-3335 NN denotes level
T3276 3340-3345 CD denotes 0.056
T3277 3350-3355 CD denotes 0.010
T3278 3346-3347 SYM denotes +
T3279 3347-3348 HYPH denotes /
T3280 3348-3349 SYM denotes -
T3281 3356-3357 -LRB- denotes (
T3282 3361-3363 CD denotes 11
T3283 3357-3358 NN denotes n
T3284 3359-3360 SYM denotes =
T3285 3363-3364 -RRB- denotes )
T3286 3364-3365 . denotes .
T3287 3365-3522 sentence denotes Despite the increased mucus accumulation in CF, there is a slight decrease in Muc2 mRNA in the CF small intestine (P < 0.0001), as previously reported [33].
T3288 3366-3373 IN denotes Despite
T3289 3420-3422 VBZ denotes is
T3290 3374-3377 DT denotes the
T3291 3394-3406 NN denotes accumulation
T3292 3378-3387 VBN denotes increased
T3293 3388-3393 NN denotes mucus
T3294 3407-3409 IN denotes in
T3295 3410-3412 NN denotes CF
T3296 3412-3414 , denotes ,
T3297 3414-3419 EX denotes there
T3298 3423-3424 DT denotes a
T3299 3432-3440 NN denotes decrease
T3300 3425-3431 JJ denotes slight
T3301 3441-3443 IN denotes in
T3302 3444-3448 NN denotes Muc2
T3303 3449-3453 NN denotes mRNA
T3304 3454-3456 IN denotes in
T3305 3457-3460 DT denotes the
T3306 3470-3479 NN denotes intestine
T3307 3461-3463 NN denotes CF
T3308 3464-3469 JJ denotes small
T3309 3480-3481 -LRB- denotes (
T3310 3485-3491 CD denotes 0.0001
T3311 3481-3482 NN denotes P
T3312 3483-3484 SYM denotes <
T3313 3491-3492 -RRB- denotes )
T3314 3492-3494 , denotes ,
T3315 3494-3496 IN denotes as
T3316 3508-3516 VBN denotes reported
T3317 3497-3507 RB denotes previously
T3318 3517-3518 -LRB- denotes [
T3319 3518-3520 CD denotes 33
T3320 3520-3521 -RRB- denotes ]
T3321 3521-3522 . denotes .
T3322 3522-3670 sentence denotes However, the milder CF phenotype on the mixed background, which includes less mucus accumulation, does not involve decreased mucin gene expression.
T3323 3523-3530 RB denotes However
T3324 3630-3637 VB denotes involve
T3325 3530-3532 , denotes ,
T3326 3532-3535 DT denotes the
T3327 3546-3555 NN denotes phenotype
T3328 3536-3542 JJR denotes milder
T3329 3543-3545 NN denotes CF
T3330 3556-3558 IN denotes on
T3331 3559-3562 DT denotes the
T3332 3569-3579 NN denotes background
T3333 3563-3568 JJ denotes mixed
T3334 3579-3581 , denotes ,
T3335 3581-3586 WDT denotes which
T3336 3587-3595 VBZ denotes includes
T3337 3596-3600 JJ denotes less
T3338 3607-3619 NN denotes accumulation
T3339 3601-3606 NN denotes mucus
T3340 3619-3621 , denotes ,
T3341 3621-3625 VBZ denotes does
T3342 3626-3629 RB denotes not
T3343 3638-3647 VBN denotes decreased
T3344 3659-3669 NN denotes expression
T3345 3648-3653 NN denotes mucin
T3346 3654-3658 NN denotes gene
T3347 3669-3670 . denotes .
T6955 1675-1687 JJ denotes Histological
T6956 1688-1698 NN denotes appearance
T6957 1699-1701 IN denotes of
T6958 1702-1705 DT denotes the
T6959 1712-1721 NN denotes intestine
T6960 1706-1711 JJ denotes small
T6961 1722-1724 IN denotes of
T6962 1725-1729 JJ denotes wild
T6963 1730-1734 NN denotes type
T6964 1742-1746 NNS denotes mice
T6965 1735-1738 CC denotes and
T6966 1739-1741 NN denotes CF
T6967 1747-1749 IN denotes on
T6968 1750-1753 DT denotes the
T6969 1772-1783 NNS denotes backgrounds
T6970 1754-1763 JJ denotes different
T6971 1764-1771 JJ denotes genetic
T6972 1783-1784 . denotes .
T6973 1784-1854 sentence denotes Tissue was paraffin embedded and stained with PAS for neutral mucins.
T6974 1785-1791 NN denotes Tissue
T6975 1805-1813 VBN denotes embedded
T6976 1792-1795 VBD denotes was
T6977 1796-1804 NN denotes paraffin
T6978 1814-1817 CC denotes and
T6979 1818-1825 VBN denotes stained
T6980 1826-1830 IN denotes with
T6981 1831-1834 NN denotes PAS
T6982 1835-1838 IN denotes for
T6983 1839-1846 JJ denotes neutral
T6984 1847-1853 NNS denotes mucins
T6985 1853-1854 . denotes .
T6986 1854-1918 sentence denotes The sections are from the middle portion of the small intestine
T6987 1855-1858 DT denotes The
T6988 1859-1867 NNS denotes sections
T6989 1868-1871 VBP denotes are
T6990 1872-1876 IN denotes from
T6991 1877-1880 DT denotes the
T6992 1888-1895 NN denotes portion
T6993 1881-1887 JJ denotes middle
T6994 1896-1898 IN denotes of
T6995 1899-1902 DT denotes the
T6996 1909-1918 NN denotes intestine
T6997 1903-1908 JJ denotes small
T6998 1918-1954 sentence denotes (A) Wild type on the B6 background.
T6999 1919-1920 -LRB- denotes (
T7000 1920-1921 LS denotes A
T7001 1928-1932 NN denotes type
T7002 1921-1922 -RRB- denotes )
T7003 1923-1927 JJ denotes Wild
T7004 1933-1935 IN denotes on
T7005 1936-1939 DT denotes the
T7006 1943-1953 NN denotes background
T7007 1940-1942 NN denotes B6
T7008 1953-1954 . denotes .
T7009 1954-1983 sentence denotes (B) CF on the B6 background.
T7010 1955-1956 -LRB- denotes (
T7011 1956-1957 LS denotes B
T7012 1959-1961 NN denotes CF
T7013 1957-1958 -RRB- denotes )
T7014 1962-1964 IN denotes on
T7015 1965-1968 DT denotes the
T7016 1972-1982 NN denotes background
T7017 1969-1971 NN denotes B6
T7018 1982-1983 . denotes .
T7019 1983-2022 sentence denotes (C) Wild type on the mixed background.
T7020 1984-1985 -LRB- denotes (
T7021 1985-1986 LS denotes C
T7022 1993-1997 NN denotes type
T7023 1986-1987 -RRB- denotes )
T7024 1988-1992 JJ denotes Wild
T7025 1998-2000 IN denotes on
T7026 2001-2004 DT denotes the
T7027 2011-2021 NN denotes background
T7028 2005-2010 JJ denotes mixed
T7029 2021-2022 . denotes .
T7030 2022-2056 sentence denotes (D-F) CF on the mixed background.
T7031 2023-2024 -LRB- denotes (
T7032 2024-2025 LS denotes D
T7033 2029-2031 NN denotes CF
T7034 2025-2026 HYPH denotes -
T7035 2026-2027 LS denotes F
T7036 2027-2028 -RRB- denotes )
T7037 2032-2034 IN denotes on
T7038 2035-2038 DT denotes the
T7039 2045-2055 NN denotes background
T7040 2039-2044 JJ denotes mixed
T7041 2055-2056 . denotes .
T7042 2056-2164 sentence denotes (A, C) In the wild type tissue from both backgrounds, the crypts are small and have narrow lumina (arrows).
T7043 2057-2058 -LRB- denotes (
T7044 2058-2059 LS denotes A
T7045 2122-2125 VBP denotes are
T7046 2059-2061 , denotes ,
T7047 2061-2062 LS denotes C
T7048 2062-2063 -RRB- denotes )
T7049 2064-2066 IN denotes In
T7050 2067-2070 DT denotes the
T7051 2081-2087 NN denotes tissue
T7052 2071-2075 JJ denotes wild
T7053 2076-2080 NN denotes type
T7054 2088-2092 IN denotes from
T7055 2093-2097 DT denotes both
T7056 2098-2109 NNS denotes backgrounds
T7057 2109-2111 , denotes ,
T7058 2111-2114 DT denotes the
T7059 2115-2121 NNS denotes crypts
T7060 2126-2131 JJ denotes small
T7061 2132-2135 CC denotes and
T7062 2136-2140 VBP denotes have
T7063 2141-2147 JJ denotes narrow
T7064 2148-2154 NNS denotes lumina
T7065 2155-2156 -LRB- denotes (
T7066 2156-2162 NNS denotes arrows
T7067 2162-2163 -RRB- denotes )
T7068 2163-2164 . denotes .
T7069 2164-2289 sentence denotes (B) In the CF tissue on the B6 background, the crypt lumina are greatly dilated and filled with PAS-reactive mucus (arrows).
T7070 2165-2166 -LRB- denotes (
T7071 2166-2167 LS denotes B
T7072 2225-2228 VBP denotes are
T7073 2167-2168 -RRB- denotes )
T7074 2169-2171 IN denotes In
T7075 2172-2175 DT denotes the
T7076 2179-2185 NN denotes tissue
T7077 2176-2178 NN denotes CF
T7078 2186-2188 IN denotes on
T7079 2189-2192 DT denotes the
T7080 2196-2206 NN denotes background
T7081 2193-2195 NN denotes B6
T7082 2206-2208 , denotes ,
T7083 2208-2211 DT denotes the
T7084 2218-2224 NNS denotes lumina
T7085 2212-2217 NN denotes crypt
T7086 2229-2236 RB denotes greatly
T7087 2237-2244 VBN denotes dilated
T7088 2245-2248 CC denotes and
T7089 2249-2255 VBN denotes filled
T7090 2256-2260 IN denotes with
T7091 2261-2264 NN denotes PAS
T7092 2265-2273 JJ denotes reactive
T7093 2264-2265 HYPH denotes -
T7094 2274-2279 NN denotes mucus
T7095 2280-2281 -LRB- denotes (
T7096 2281-2287 NNS denotes arrows
T7097 2287-2288 -RRB- denotes )
T7098 2288-2289 . denotes .
T7099 2289-2436 sentence denotes In some CF mice on the mixed background, the crypts are not apparently different than wild type (D), and the crypts are normal appearing (arrows).
T7100 2290-2292 IN denotes In
T7101 2342-2345 VBP denotes are
T7102 2293-2297 DT denotes some
T7103 2301-2305 NNS denotes mice
T7104 2298-2300 NN denotes CF
T7105 2306-2308 IN denotes on
T7106 2309-2312 DT denotes the
T7107 2319-2329 NN denotes background
T7108 2313-2318 JJ denotes mixed
T7109 2329-2331 , denotes ,
T7110 2331-2334 DT denotes the
T7111 2335-2341 NNS denotes crypts
T7112 2346-2349 RB denotes not
T7113 2350-2360 RB denotes apparently
T7114 2361-2370 JJ denotes different
T7115 2371-2375 IN denotes than
T7116 2376-2380 JJ denotes wild
T7117 2381-2385 NN denotes type
T7118 2386-2387 -LRB- denotes (
T7119 2387-2388 NN denotes D
T7120 2388-2389 -RRB- denotes )
T7121 2389-2391 , denotes ,
T7122 2391-2394 CC denotes and
T7123 2395-2398 DT denotes the
T7124 2399-2405 NNS denotes crypts
T7125 2406-2409 VBP denotes are
T7126 2410-2416 JJ denotes normal
T7127 2417-2426 VBG denotes appearing
T7128 2427-2428 -LRB- denotes (
T7129 2428-2434 NNS denotes arrows
T7130 2434-2435 -RRB- denotes )
T7131 2435-2436 . denotes .
T7132 2436-2573 sentence denotes Some CF mice on the mixed background had mildly affected crypts (E), while others had greater crypt dilation and mucus accumulation (F).
T7133 2437-2441 DT denotes Some
T7134 2445-2449 NNS denotes mice
T7135 2442-2444 NN denotes CF
T7136 2474-2477 VBD denotes had
T7137 2450-2452 IN denotes on
T7138 2453-2456 DT denotes the
T7139 2463-2473 NN denotes background
T7140 2457-2462 JJ denotes mixed
T7141 2478-2484 RB denotes mildly
T7142 2494-2500 NNS denotes crypts
T7143 2485-2493 VBN denotes affected
T7144 2501-2502 -LRB- denotes (
T7145 2502-2503 NN denotes E
T7146 2503-2504 -RRB- denotes )
T7147 2504-2506 , denotes ,
T7148 2506-2511 IN denotes while
T7149 2519-2522 VBD denotes had
T7150 2512-2518 NNS denotes others
T7151 2523-2530 JJR denotes greater
T7152 2537-2545 NN denotes dilation
T7153 2531-2536 NN denotes crypt
T7154 2546-2549 CC denotes and
T7155 2550-2555 NN denotes mucus
T7156 2556-2568 NN denotes accumulation
T7157 2569-2570 -LRB- denotes (
T7158 2570-2571 NN denotes F
T7159 2571-2572 -RRB- denotes )
T7160 2572-2573 . denotes .
T7161 2573-2686 sentence denotes Overall, the CF mice on the mixed background were less severely affected compared to those on the B6 background.
T7162 2574-2581 RB denotes Overall
T7163 2638-2646 VBN denotes affected
T7164 2581-2583 , denotes ,
T7165 2583-2586 DT denotes the
T7166 2590-2594 NNS denotes mice
T7167 2587-2589 NN denotes CF
T7168 2595-2597 IN denotes on
T7169 2598-2601 DT denotes the
T7170 2608-2618 NN denotes background
T7171 2602-2607 JJ denotes mixed
T7172 2619-2623 VBD denotes were
T7173 2624-2628 RBR denotes less
T7174 2629-2637 RB denotes severely
T7175 2647-2655 VBN denotes compared
T7176 2656-2658 IN denotes to
T7177 2659-2664 DT denotes those
T7178 2665-2667 IN denotes on
T7179 2668-2671 DT denotes the
T7180 2675-2685 NN denotes background
T7181 2672-2674 NN denotes B6
T7182 2685-2686 . denotes .
T3049 1264-1267 DT denotes the
T3050 1268-1274 NNS denotes crypts
T3051 1275-1276 -LRB- denotes (
T3052 1276-1280 NN denotes Fig.
T3053 1281-1283 CD denotes 3E
T3054 1283-1284 -RRB- denotes )
T3055 1284-1286 , denotes ,
T3056 1286-1291 IN denotes while
T3057 1299-1302 VBD denotes had
T3058 1292-1298 NNS denotes others
T3059 1303-1311 JJ denotes moderate
T3060 1318-1330 NN denotes accumulation
T3061 1312-1317 NN denotes mucus
T3062 1331-1332 -LRB- denotes (
T3063 1332-1336 NN denotes Fig.
T3064 1337-1339 CD denotes 3F
T3065 1339-1340 -RRB- denotes )
T3066 1340-1341 . denotes .
T3067 1341-1505 sentence denotes A total of six CF mice on the mixed background were examined histologically, and three had little mucus, one had some mucus, and two had moderate amounts of mucus.
T3068 1342-1343 DT denotes A
T3069 1344-1349 NN denotes total
T3070 1394-1402 VBN denotes examined
T3071 1350-1352 IN denotes of
T3131 1664-2866 sentence denotes Figure 3 Histological appearance of the small intestine of wild type and CF mice on the different genetic backgrounds. Tissue was paraffin embedded and stained with PAS for neutral mucins. The sections are from the middle portion of the small intestine (A) Wild type on the B6 background. (B) CF on the B6 background. (C) Wild type on the mixed background. (D-F) CF on the mixed background. (A, C) In the wild type tissue from both backgrounds, the crypts are small and have narrow lumina (arrows). (B) In the CF tissue on the B6 background, the crypt lumina are greatly dilated and filled with PAS-reactive mucus (arrows). In some CF mice on the mixed background, the crypts are not apparently different than wild type (D), and the crypts are normal appearing (arrows). Some CF mice on the mixed background had mildly affected crypts (E), while others had greater crypt dilation and mucus accumulation (F). Overall, the CF mice on the mixed background were less severely affected compared to those on the B6 background. Thus, it appears that whatever the nature of the genetic differences between the two background strains, they affect secretion and accumulation of mucus in the CF small intestine.
T3132 2687-2691 RB denotes Thus
R1738 T2802 T2803 compound CF,mice
R1739 T2803 T2804 nsubj mice,have
R1740 T2805 T2803 prep on,mice
R1741 T2806 T2807 det the,background
R1742 T2807 T2805 pobj background,on
R1743 T2808 T2807 amod mixed,background
R1744 T2809 T2810 advmod less,accumulation
R1745 T2810 T2804 dobj accumulation,have
R1746 T2811 T2812 amod intestinal,mucus
R1747 T2812 T2810 compound mucus,accumulation
R1748 T2814 T2815 det The,difference
R1749 T2815 T2819 nsubj difference,is
R1750 T2816 T2817 advmod most,striking
R1751 T2817 T2815 amod striking,difference
R1752 T2818 T2815 amod histological,difference
R1753 T2820 T2815 prep in,difference
R1754 T2821 T2822 det the,intestine
R1755 T2822 T2820 pobj intestine,in
R1756 T2823 T2824 nmod CF,mouse
R1757 T2824 T2822 nmod mouse,intestine
R1758 T2825 T2822 amod small,intestine
R1759 T2826 T2827 det the,accumulation
R1760 T2827 T2819 attr accumulation,is
R1761 T2828 T2827 prep of,accumulation
R1762 T2829 T2828 pobj mucus,of
R1763 T2830 T2827 prep in,accumulation
R1764 T2831 T2832 amod intestinal,crypts
R1765 T2832 T2830 pobj crypts,in
R1766 T2833 T2834 dep which,associated
R1767 T2834 T2827 relcl associated,accumulation
R1768 T2835 T2834 auxpass is,associated
R1769 T2836 T2834 prep with,associated
R1770 T2837 T2838 det the,obstruction
R1771 T2838 T2836 pobj obstruction,with
R1772 T2839 T2838 amod lethal,obstruction
R1773 T2840 T2841 dep that,results
R1774 T2841 T2838 relcl results,obstruction
R1775 T2842 T2841 prep in,results
R1776 T2843 T2842 pobj death,in
R1777 T2844 T2843 prep of,death
R1778 T2845 T2846 det these,mice
R1779 T2846 T2844 pobj mice,of
R1780 T2847 T2841 prep on,results
R1781 T2848 T2849 det a,diet
R1782 T2849 T2847 pobj diet,on
R1783 T2850 T2849 amod standard,diet
R1784 T2851 T2849 amod solid,diet
R1785 T2852 T2849 compound chow,diet
R1786 T2853 T2854 punct [,32
R1787 T2854 T2819 parataxis 32,is
R1788 T2855 T2854 punct ],32
R1789 T2856 T2819 punct .,is
R1790 T2858 T2859 advcl Using,performed
R1791 T2860 T2861 amod periodic,acid
R1792 T2861 T2862 nmod acid,staining
R1793 T2862 T2858 dobj staining,Using
R1794 T2863 T2862 poss Schiff,staining
R1795 T2864 T2863 case 's,Schiff
R1796 T2865 T2858 prep for,Using
R1797 T2866 T2867 amod neutral,mucins
R1798 T2867 T2865 pobj mucins,for
R1799 T2868 T2859 punct ", ",performed
R1800 T2869 T2870 amod histological,analysis
R1801 T2870 T2859 nsubjpass analysis,performed
R1802 T2871 T2870 prep of,analysis
R1803 T2872 T2873 amod small,tissues
R1804 T2873 T2871 pobj tissues,of
R1805 T2874 T2873 compound intestine,tissues
R1806 T2875 T2859 auxpass was,performed
R1807 T2876 T2859 punct .,performed
R1808 T2878 T2879 det The,intestine
R1809 T2879 T2883 nsubj intestine,were
R1810 T2880 T2881 amod wild,type
R1811 T2881 T2879 nmod type,intestine
R1812 T2882 T2879 amod small,intestine
R1813 T2884 T2879 prep on,intestine
R1814 T2885 T2886 preconj both,B6
R1815 T2886 T2884 pobj B6,on
R1816 T2887 T2886 det the,B6
R1817 T2888 T2886 cc and,B6
R1818 T2889 T2890 det the,mixed
R1819 T2890 T2891 nmod mixed,backgrounds
R1820 T2891 T2886 conj backgrounds,B6
R1821 T2892 T2891 amod genetic,backgrounds
R1822 T2893 T2883 acomp similar,were
R1823 T2894 T2883 punct .,were
R1824 T2896 T2897 det The,crypts
R1825 T2897 T2899 nsubj crypts,were
R1826 T2898 T2897 amod intestinal,crypts
R1827 T2900 T2901 advmod very,small
R1828 T2901 T2899 acomp small,were
R1829 T2902 T2899 prep with,were
R1830 T2903 T2904 amod only,traces
R1831 T2904 T2902 pobj traces,with
R1832 T2905 T2904 prep of,traces
R1833 T2906 T2907 compound PAS,reactivity
R1834 T2907 T2905 pobj reactivity,of
R1835 T2908 T2907 punct -,reactivity
R1836 T2909 T2904 prep in,traces
R1837 T2910 T2911 det the,lumen
R1838 T2911 T2909 pobj lumen,in
R1839 T2912 T2913 punct (,3A
R1840 T2913 T2899 parataxis 3A,were
R1841 T2914 T2913 nmod Fig.,3A
R1842 T2915 T2913 cc and,3A
R1843 T2916 T2913 conj 3C,3A
R1844 T2917 T2913 punct ", ",3A
R1845 T2918 T2913 advmod respectively,3A
R1846 T2919 T2913 punct ),3A
R1847 T2920 T2899 punct .,were
R1848 T2922 T2923 det The,surfaces
R1849 T2923 T2924 nsubj surfaces,were
R1850 T2925 T2923 prep of,surfaces
R1851 T2926 T2927 det the,epithelium
R1852 T2927 T2925 pobj epithelium,of
R1853 T2928 T2927 compound villus,epithelium
R1854 T2929 T2930 advmod moderately,stained
R1855 T2930 T2924 acomp stained,were
R1856 T2931 T2924 cc and,were
R1857 T2932 T2933 compound goblet,cells
R1858 T2933 T2934 nsubjpass cells,stained
R1859 T2934 T2924 conj stained,were
R1860 T2935 T2934 auxpass were,stained
R1861 T2936 T2934 advmod strongly,stained
R1862 T2937 T2934 prep in,stained
R1863 T2938 T2939 det the,tissues
R1864 T2939 T2937 pobj tissues,in
R1865 T2940 T2941 amod wild,type
R1866 T2941 T2939 compound type,tissues
R1867 T2942 T2934 punct .,stained
R1868 T2944 T2945 prep In,exhibited
R1869 T2946 T2944 pobj contrast,In
R1870 T2947 T2945 punct ", ",exhibited
R1871 T2948 T2949 det the,intestine
R1872 T2949 T2945 nsubj intestine,exhibited
R1873 T2950 T2949 prep of,intestine
R1874 T2951 T2952 compound CF,mice
R1875 T2952 T2950 pobj mice,of
R1876 T2953 T2952 prep on,mice
R1877 T2954 T2955 det the,background
R1878 T2955 T2953 pobj background,on
R1879 T2956 T2955 nmod B6,background
R1880 T2957 T2955 amod genetic,background
R1881 T2958 T2959 advmod greatly,dilated
R1882 T2959 T2960 amod dilated,crypts
R1883 T2960 T2945 dobj crypts,exhibited
R1884 T2961 T2960 acl filled,crypts
R1885 T2962 T2961 prep with,filled
R1886 T2963 T2964 npadvmod PAS,reactive
R1887 T2964 T2966 amod reactive,mucus
R1888 T2965 T2964 punct -,reactive
R1889 T2966 T2962 pobj mucus,with
R1890 T2967 T2968 punct (,Fig.
R1891 T2968 T2945 parataxis Fig.,exhibited
R1892 T2969 T2968 nummod 3B,Fig.
R1893 T2970 T2968 punct ),Fig.
R1894 T2971 T2945 punct .,exhibited
R1895 T2973 T2974 compound CF,mice
R1896 T2974 T2975 nsubj mice,had
R1897 T2976 T2974 prep on,mice
R1898 T2977 T2978 det the,background
R1899 T2978 T2976 pobj background,on
R1900 T2979 T2978 amod mixed,background
R1901 T2980 T2981 amod less,accumulation
R1902 T2981 T2975 dobj accumulation,had
R1903 T2982 T2981 compound mucus,accumulation
R1904 T2983 T2981 prep than,accumulation
R1905 T2984 T2985 compound CF,mice
R1906 T2985 T2983 pobj mice,than
R1907 T2986 T2985 prep on,mice
R1908 T2987 T2988 det the,background
R1909 T2988 T2986 pobj background,on
R1910 T2989 T2988 compound B6,background
R1911 T2990 T2991 punct (,Fig.
R1912 T2991 T2975 parataxis Fig.,had
R1913 T2992 T2991 nummod 3D,Fig.
R1914 T2993 T2994 punct -,F
R1915 T2994 T2991 prep F,Fig.
R1916 T2995 T2991 punct ),Fig.
R1917 T2996 T2975 punct .,had
R1918 T2998 T2999 det The,amount
R1919 T2999 T3000 nsubj amount,was
R1920 T3001 T2999 prep of,amount
R1921 T3002 T3001 pobj mucus,of
R1922 T3003 T2999 prep in,amount
R1923 T3004 T3005 compound CF,mice
R1924 T3005 T3003 pobj mice,in
R1925 T3006 T3005 prep on,mice
R1926 T3007 T3008 det the,background
R1927 T3008 T3006 pobj background,on
R1928 T3009 T3008 amod mixed,background
R1929 T3010 T3000 acomp variable,was
R1930 T3011 T3000 prep from,was
R1931 T3012 T3011 pobj mouse,from
R1932 T3013 T3011 prep to,from
R1933 T3014 T3013 pobj mouse,to
R1934 T3015 T3000 punct .,was
R1935 T3017 T3018 prep In,accumulated
R1936 T3019 T3020 det some,mice
R1937 T3020 T3017 pobj mice,In
R1938 T3021 T3022 punct (,Fig.
R1939 T3022 T3020 parataxis Fig.,mice
R1940 T3023 T3022 nummod 3D,Fig.
R1941 T3024 T3022 punct ),Fig.
R1942 T3025 T3018 punct ", ",accumulated
R1943 T3026 T3027 advmod only,crypts
R1944 T3027 T3018 nsubj crypts,accumulated
R1945 T3028 T3027 amod occasional,crypts
R1946 T3029 T3018 aux had,accumulated
R1947 T3030 T3018 dobj mucus,accumulated
R1948 T3031 T3018 cc and,accumulated
R1949 T3032 T3033 det the,lumina
R1950 T3033 T3035 nsubj lumina,were
R1951 T3034 T3033 compound crypt,lumina
R1952 T3035 T3018 conj were,accumulated
R1953 T3036 T3035 neg not,were
R1954 T3037 T3038 advmod very,dilated
R1955 T3038 T3035 acomp dilated,were
R1956 T3039 T3018 punct .,accumulated
R1957 T3041 T3042 prep In,was
R1958 T3043 T3044 det some,mice
R1959 T3044 T3041 pobj mice,In
R1960 T3045 T3042 expl there,was
R1961 T3046 T3047 amod more,mucus
R1962 T3047 T3042 attr mucus,was
R1963 T3048 T3042 prep in,was
R1964 T3049 T3050 det the,crypts
R1965 T3050 T3048 pobj crypts,in
R1966 T3051 T3052 punct (,Fig.
R1967 T3052 T3042 parataxis Fig.,was
R1968 T3053 T3052 nummod 3E,Fig.
R1969 T3054 T3052 punct ),Fig.
R1970 T3055 T3042 punct ", ",was
R1971 T3056 T3057 mark while,had
R1972 T3057 T3042 advcl had,was
R1973 T3058 T3057 nsubj others,had
R1974 T3059 T3060 amod moderate,accumulation
R1975 T3060 T3057 dobj accumulation,had
R1976 T3061 T3060 compound mucus,accumulation
R1977 T3062 T3063 punct (,Fig.
R1978 T3063 T3057 parataxis Fig.,had
R1979 T3064 T3063 nummod 3F,Fig.
R1980 T3065 T3063 punct ),Fig.
R1981 T3066 T3042 punct .,was
R1982 T3068 T3069 det A,total
R1983 T3069 T3070 nsubjpass total,examined
R1984 T3071 T3069 prep of,total
R1985 T3072 T3073 nummod six,mice
R1986 T3073 T3071 pobj mice,of
R1987 T3074 T3073 compound CF,mice
R1988 T3075 T3073 prep on,mice
R1989 T3076 T3077 det the,background
R1990 T3077 T3075 pobj background,on
R1991 T3078 T3077 amod mixed,background
R1992 T3079 T3070 auxpass were,examined
R1993 T3080 T3070 advmod histologically,examined
R1994 T3081 T3070 punct ", ",examined
R1995 T3082 T3070 cc and,examined
R1996 T3083 T3084 nsubj three,had
R1997 T3084 T3070 conj had,examined
R1998 T3085 T3086 amod little,mucus
R1999 T3086 T3084 dobj mucus,had
R2039 T3128 T3126 pobj background,on
R2040 T3129 T3128 compound B6,background
R2041 T3130 T3103 punct .,had
R2047 T3138 T3139 dep whatever,nature
R2048 T3139 T3137 advcl nature,affect
R2049 T3140 T3139 det the,nature
R2050 T3141 T3139 prep of,nature
R2051 T3142 T3143 det the,differences
R2052 T3143 T3141 pobj differences,of
R2053 T3144 T3143 amod genetic,differences
R2054 T3145 T3143 prep between,differences
R2055 T3146 T3147 det the,strains
R2056 T3147 T3145 pobj strains,between
R2057 T3148 T3147 nummod two,strains
R2058 T3149 T3147 compound background,strains
R2059 T3150 T3137 punct ", ",affect
R2060 T3151 T3137 nsubj they,affect
R2061 T3152 T3137 dobj secretion,affect
R2062 T3153 T3152 cc and,secretion
R2063 T3154 T3152 conj accumulation,secretion
R2064 T3155 T3152 prep of,secretion
R2065 T3156 T3155 pobj mucus,of
R2066 T3157 T3152 prep in,secretion
R2067 T3158 T3159 det the,intestine
R2068 T3159 T3157 pobj intestine,in
R2069 T3160 T3159 nmod CF,intestine
R2070 T3161 T3159 amod small,intestine
R2071 T3162 T3133 punct .,appears
R2072 T3164 T3165 aux To,determine
R2073 T3165 T3166 advcl determine,used
R2074 T3167 T3168 mark if,accounted
R2075 T3168 T3165 ccomp accounted,determine
R2076 T3169 T3170 det the,difference
R2077 T3170 T3168 nsubjpass difference,accounted
R2078 T3171 T3168 aux could,accounted
R2079 T3172 T3168 auxpass be,accounted
R2080 T3173 T3168 prep for,accounted
R2081 T3174 T3168 prep by,accounted
R2082 T3175 T3176 amod altered,gene
R2083 T3176 T3178 compound gene,expression
R2084 T3177 T3176 compound mucin,gene
R2085 T3178 T3174 pobj expression,by
R2086 T3179 T3166 punct ", ",used
R2087 T3180 T3181 amod quantitative,PCR
R2088 T3181 T3166 nsubjpass PCR,used
R2089 T3182 T3181 compound RT,PCR
R2090 T3183 T3181 punct -,PCR
R2091 T3184 T3166 auxpass was,used
R2092 T3185 T3186 aux to,measure
R2093 T3186 T3166 advcl measure,used
R2094 T3187 T3188 compound mRNA,expression
R2095 T3188 T3186 dobj expression,measure
R2096 T3189 T3188 prep of,expression
R2097 T3190 T3191 det the,gene
R2098 T3191 T3189 pobj gene,of
R2099 T3192 T3193 amod intestinal,cell
R2100 T3193 T3191 compound cell,gene
R2101 T3194 T3193 compound goblet,cell
R2102 T3195 T3191 compound mucin,gene
R2103 T3196 T3191 punct ", ",gene
R2104 T3197 T3191 appos Muc2,gene
R2105 T3198 T3166 punct .,used
R2106 T3200 T3201 prep In,had
R2107 T3202 T3203 amod wild,type
R2108 T3203 T3204 compound type,intestine
R2109 T3204 T3200 pobj intestine,In
R2110 T3205 T3201 punct ", ",had
R2111 T3206 T3207 compound B6,mice
R2112 T3207 T3201 nsubj mice,had
R2113 T3208 T3209 quantmod 0.079,0.024
R2114 T3209 T3213 nummod 0.024,copies
R2115 T3210 T3209 punct +,0.024
R2116 T3211 T3209 punct /,0.024
R2117 T3212 T3209 punct -,0.024
R2118 T3213 T3201 dobj copies,had
R2119 T3214 T3213 prep of,copies
R2120 T3215 T3216 compound Muc2,GAPDH
R2121 T3216 T3214 pobj GAPDH,of
R2122 T3217 T3216 punct /,GAPDH
R2123 T3218 T3219 punct (,8
R2124 T3219 T3213 parataxis 8,copies
R2125 T3220 T3219 nsubj n,8
R2126 T3221 T3219 punct =,8
R2127 T3222 T3219 punct ),8
R2128 T3223 T3201 punct ", ",had
R2129 T3224 T3201 cc and,had
R2130 T3225 T3226 prep on,was
R2131 T3226 T3201 conj was,had
R2132 T3227 T3228 det the,background
R2133 T3228 T3225 pobj background,on
R2134 T3229 T3228 amod mixed,background
R2135 T3230 T3231 det the,level
R2136 T3231 T3226 nsubj level,was
R2137 T3232 T3233 quantmod 0.077,0.012
R2138 T3233 T3226 attr 0.012,was
R2139 T3234 T3233 punct +,0.012
R2140 T3235 T3233 punct /,0.012
R2141 T3236 T3233 punct -,0.012
R2142 T3237 T3238 punct (,11
R2143 T3238 T3233 parataxis 11,0.012
R2144 T3239 T3238 nsubj n,11
R2145 T3240 T3238 punct =,11
R2146 T3241 T3238 punct ),11
R2147 T3242 T3226 punct .,was
R2148 T3244 T3245 compound CF,mice
R2149 T3245 T3246 nsubj mice,had
R2150 T3247 T3245 prep on,mice
R2151 T3248 T3249 det the,background
R2152 T3249 T3247 pobj background,on
R2153 T3250 T3249 compound B6,background
R2154 T3251 T3252 quantmod 0.059,0.024
R2155 T3252 T3256 nummod 0.024,copies
R2156 T3253 T3252 punct +,0.024
R2157 T3254 T3252 punct /,0.024
R2158 T3255 T3252 punct -,0.024
R2159 T3256 T3246 dobj copies,had
R2160 T3257 T3256 prep of,copies
R2161 T3258 T3259 compound Muc2,mRNA
R2162 T3259 T3257 pobj mRNA,of
R2163 T3260 T3256 prep per,copies
R2164 T3261 T3260 pobj GAPDH,per
R2165 T3262 T3263 punct (,11
R2166 T3263 T3256 parataxis 11,copies
R2167 T3264 T3263 nsubj n,11
R2168 T3265 T3263 punct =,11
R2169 T3266 T3263 punct ),11
R2170 T3267 T3246 punct ", ",had
R2171 T3268 T3246 cc and,had
R2172 T3269 T3270 prep on,was
R2173 T3270 T3246 conj was,had
R2174 T3271 T3272 det the,background
R2175 T3272 T3269 pobj background,on
R2176 T3273 T3272 amod mixed,background
R2177 T3274 T3275 det the,level
R2178 T3275 T3270 nsubj level,was
R2179 T3276 T3277 quantmod 0.056,0.010
R2180 T3277 T3270 attr 0.010,was
R2181 T3278 T3277 punct +,0.010
R2182 T3279 T3277 punct /,0.010
R2183 T3280 T3277 punct -,0.010
R2184 T3281 T3282 punct (,11
R2185 T3282 T3270 parataxis 11,was
R2186 T3283 T3282 nsubj n,11
R2187 T3284 T3282 punct =,11
R2188 T3285 T3282 punct ),11
R2189 T3286 T3270 punct .,was
R2190 T3288 T3289 prep Despite,is
R2191 T3290 T3291 det the,accumulation
R2192 T3291 T3288 pobj accumulation,Despite
R2193 T3292 T3291 amod increased,accumulation
R2194 T3293 T3291 compound mucus,accumulation
R2195 T3294 T3291 prep in,accumulation
R2196 T3295 T3294 pobj CF,in
R2197 T3296 T3289 punct ", ",is
R2198 T3297 T3289 expl there,is
R2199 T3298 T3299 det a,decrease
R2200 T3299 T3289 attr decrease,is
R2201 T3300 T3299 amod slight,decrease
R2202 T3301 T3299 prep in,decrease
R2203 T3302 T3303 compound Muc2,mRNA
R2204 T3303 T3301 pobj mRNA,in
R2205 T3304 T3289 prep in,is
R2206 T3305 T3306 det the,intestine
R2207 T3306 T3304 pobj intestine,in
R2208 T3307 T3306 nmod CF,intestine
R2209 T3308 T3306 amod small,intestine
R2210 T3309 T3310 punct (,0.0001
R2211 T3310 T3289 parataxis 0.0001,is
R2212 T3311 T3310 nsubj P,0.0001
R2213 T3312 T3310 punct <,0.0001
R2214 T3313 T3310 punct ),0.0001
R2215 T3314 T3289 punct ", ",is
R2216 T3315 T3316 mark as,reported
R2217 T3316 T3289 advcl reported,is
R2218 T3317 T3316 advmod previously,reported
R2219 T3318 T3319 punct [,33
R2220 T3319 T3289 parataxis 33,is
R2221 T3320 T3319 punct ],33
R2222 T3321 T3289 punct .,is
R2223 T3323 T3324 advmod However,involve
R2224 T3325 T3324 punct ", ",involve
R2225 T3326 T3327 det the,phenotype
R2226 T3327 T3324 nsubj phenotype,involve
R2227 T3328 T3327 amod milder,phenotype
R2228 T3329 T3327 compound CF,phenotype
R2229 T3330 T3327 prep on,phenotype
R2230 T3331 T3332 det the,background
R2231 T3332 T3330 pobj background,on
R2232 T3333 T3332 amod mixed,background
R2233 T3334 T3327 punct ", ",phenotype
R2234 T3335 T3336 dep which,includes
R2235 T3336 T3327 relcl includes,phenotype
R2236 T3337 T3338 amod less,accumulation
R2237 T3338 T3336 dobj accumulation,includes
R2238 T3339 T3338 compound mucus,accumulation
R2239 T3340 T3324 punct ", ",involve
R2240 T3341 T3324 aux does,involve
R2241 T3342 T3324 neg not,involve
R2242 T3343 T3344 amod decreased,expression
R2243 T3344 T3324 dobj expression,involve
R2244 T3345 T3346 compound mucin,gene
R2245 T3346 T3344 compound gene,expression
R2246 T3347 T3324 punct .,involve
R4660 T6955 T6956 amod Histological,appearance
R4661 T6957 T6956 prep of,appearance
R4662 T6958 T6959 det the,intestine
R4663 T6959 T6957 pobj intestine,of
R4664 T6960 T6959 amod small,intestine
R4665 T6961 T6959 prep of,intestine
R4666 T6962 T6963 amod wild,type
R4667 T6963 T6964 nmod type,mice
R4668 T6964 T6961 pobj mice,of
R4669 T6965 T6963 cc and,type
R4670 T6966 T6963 conj CF,type
R4671 T6967 T6964 prep on,mice
R4672 T6968 T6969 det the,backgrounds
R4673 T6969 T6967 pobj backgrounds,on
R4674 T6970 T6969 amod different,backgrounds
R4675 T6971 T6969 amod genetic,backgrounds
R4676 T6972 T6956 punct .,appearance
R4677 T6974 T6975 nsubjpass Tissue,embedded
R4678 T6976 T6975 auxpass was,embedded
R4679 T6977 T6975 dep paraffin,embedded
R4680 T6978 T6975 cc and,embedded
R4681 T6979 T6975 conj stained,embedded
R4682 T6980 T6979 prep with,stained
R4683 T6981 T6980 pobj PAS,with
R4684 T6982 T6979 prep for,stained
R4685 T6983 T6984 amod neutral,mucins
R4686 T6984 T6982 pobj mucins,for
R4687 T6985 T6975 punct .,embedded
R4688 T6987 T6988 det The,sections
R4689 T6988 T6989 nsubj sections,are
R4690 T6990 T6989 prep from,are
R4691 T6991 T6992 det the,portion
R4692 T6992 T6990 pobj portion,from
R4693 T6993 T6992 amod middle,portion
R4694 T6994 T6992 prep of,portion
R4695 T6995 T6996 det the,intestine
R4696 T6996 T6994 pobj intestine,of
R4697 T6997 T6996 amod small,intestine
R4698 T6999 T7000 punct (,A
R4699 T7000 T7001 meta A,type
R4700 T7002 T7000 punct ),A
R4701 T7003 T7001 amod Wild,type
R4702 T7004 T7001 prep on,type
R4703 T7005 T7006 det the,background
R4704 T7006 T7004 pobj background,on
R4705 T7007 T7006 compound B6,background
R4706 T7008 T7001 punct .,type
R4707 T7010 T7011 punct (,B
R4708 T7011 T7012 meta B,CF
R4709 T7013 T7011 punct ),B
R4710 T7014 T7012 prep on,CF
R4711 T7015 T7016 det the,background
R4712 T7016 T7014 pobj background,on
R4713 T7017 T7016 compound B6,background
R4714 T7018 T7012 punct .,CF
R4715 T7020 T7021 punct (,C
R4716 T7021 T7022 meta C,type
R4717 T7023 T7021 punct ),C
R4718 T7024 T7022 amod Wild,type
R4719 T7025 T7022 prep on,type
R4720 T7026 T7027 det the,background
R4721 T7027 T7025 pobj background,on
R4722 T7028 T7027 amod mixed,background
R4723 T7029 T7022 punct .,type
R4724 T7031 T7032 punct (,D
R4725 T7032 T7033 meta D,CF
R4726 T7034 T7032 punct -,D
R4727 T7035 T7032 dep F,D
R4728 T7036 T7032 punct ),D
R4729 T7037 T7033 prep on,CF
R4730 T7038 T7039 det the,background
R4731 T7039 T7037 pobj background,on
R4732 T7040 T7039 amod mixed,background
R4733 T7041 T7033 punct .,CF
R4734 T7043 T7044 punct (,A
R4735 T7044 T7045 meta A,are
R4736 T7046 T7044 punct ", ",A
R4737 T7047 T7044 dep C,A
R4738 T7048 T7044 punct ),A
R4739 T7049 T7045 prep In,are
R4740 T7050 T7051 det the,tissue
R4741 T7051 T7049 pobj tissue,In
R4742 T7052 T7053 amod wild,type
R4743 T7053 T7051 compound type,tissue
R4744 T7054 T7051 prep from,tissue
R4745 T7055 T7056 det both,backgrounds
R4746 T7056 T7054 pobj backgrounds,from
R4747 T7057 T7045 punct ", ",are
R4748 T7058 T7059 det the,crypts
R4749 T7059 T7045 nsubj crypts,are
R4750 T7060 T7045 acomp small,are
R4751 T7061 T7045 cc and,are
R4752 T7062 T7045 conj have,are
R4753 T7063 T7064 amod narrow,lumina
R4754 T7064 T7062 dobj lumina,have
R4755 T7065 T7066 punct (,arrows
R4756 T7066 T7062 parataxis arrows,have
R4757 T7067 T7066 punct ),arrows
R4758 T7068 T7045 punct .,are
R4759 T7070 T7071 punct (,B
R4760 T7071 T7072 meta B,are
R4761 T7073 T7071 punct ),B
R4762 T7074 T7072 prep In,are
R4763 T7075 T7076 det the,tissue
R4764 T7076 T7074 pobj tissue,In
R4765 T7077 T7076 compound CF,tissue
R4766 T7078 T7076 prep on,tissue
R4767 T7079 T7080 det the,background
R4768 T7080 T7078 pobj background,on
R4769 T7081 T7080 compound B6,background
R4770 T7082 T7072 punct ", ",are
R4771 T7083 T7084 det the,lumina
R4772 T7084 T7072 nsubj lumina,are
R4773 T7085 T7084 compound crypt,lumina
R4774 T7086 T7087 advmod greatly,dilated
R4775 T7087 T7072 acomp dilated,are
R4776 T7088 T7087 cc and,dilated
R4777 T7089 T7087 conj filled,dilated
R4778 T7090 T7089 prep with,filled
R4779 T7091 T7092 npadvmod PAS,reactive
R4780 T7092 T7094 amod reactive,mucus
R4781 T7093 T7092 punct -,reactive
R4782 T7094 T7090 pobj mucus,with
R4783 T7095 T7096 punct (,arrows
R4784 T7096 T7072 parataxis arrows,are
R4785 T7097 T7096 punct ),arrows
R4786 T7098 T7072 punct .,are
R4787 T7100 T7101 prep In,are
R4788 T7102 T7103 det some,mice
R4789 T7103 T7100 pobj mice,In
R4790 T7104 T7103 compound CF,mice
R4791 T7105 T7103 prep on,mice
R4792 T7106 T7107 det the,background
R4793 T7107 T7105 pobj background,on
R4794 T7108 T7107 amod mixed,background
R4795 T7109 T7101 punct ", ",are
R4796 T7110 T7111 det the,crypts
R4797 T7111 T7101 nsubj crypts,are
R4798 T7112 T7101 neg not,are
R4799 T7113 T7101 advmod apparently,are
R4800 T7114 T7101 acomp different,are
R4801 T7115 T7114 prep than,different
R4802 T7116 T7117 amod wild,type
R4803 T7117 T7115 pobj type,than
R4804 T7118 T7119 punct (,D
R4805 T7119 T7101 parataxis D,are
R4806 T7120 T7119 punct ),D
R4807 T7121 T7101 punct ", ",are
R4808 T7122 T7101 cc and,are
R4809 T7123 T7124 det the,crypts
R4810 T7124 T7125 nsubj crypts,are
R4811 T7125 T7101 conj are,are
R4812 T7126 T7127 amod normal,appearing
R4813 T7127 T7125 acomp appearing,are
R4814 T7128 T7129 punct (,arrows
R4815 T7129 T7125 parataxis arrows,are
R4816 T7130 T7129 punct ),arrows
R4817 T7131 T7101 punct .,are
R4818 T7133 T7134 det Some,mice
R4819 T7134 T7136 nsubj mice,had
R4820 T7135 T7134 compound CF,mice
R4821 T7137 T7134 prep on,mice
R4822 T7138 T7139 det the,background
R4823 T7139 T7137 pobj background,on
R4824 T7140 T7139 amod mixed,background
R4825 T7141 T7142 advmod mildly,crypts
R4826 T7142 T7136 dobj crypts,had
R4827 T7143 T7142 amod affected,crypts
R4828 T7144 T7145 punct (,E
R4829 T7145 T7136 parataxis E,had
R4830 T7146 T7145 punct ),E
R4831 T7147 T7136 punct ", ",had
R4832 T7148 T7149 mark while,had
R4833 T7149 T7136 advcl had,had
R4834 T7150 T7149 nsubj others,had
R4835 T7151 T7152 amod greater,dilation
R4836 T7152 T7149 dobj dilation,had
R4837 T7153 T7152 compound crypt,dilation
R4838 T7154 T7152 cc and,dilation
R4839 T7155 T7156 compound mucus,accumulation
R4840 T7156 T7152 conj accumulation,dilation
R4841 T7157 T7158 punct (,F
R4842 T7158 T7149 parataxis F,had
R4843 T7159 T7158 punct ),F
R4844 T7160 T7136 punct .,had
R4845 T7162 T7163 advmod Overall,affected
R4846 T7164 T7163 punct ", ",affected
R4847 T7165 T7166 det the,mice
R4848 T7166 T7163 nsubjpass mice,affected
R4849 T7167 T7166 compound CF,mice
R4850 T7168 T7166 prep on,mice
R4851 T7169 T7170 det the,background
R4852 T7170 T7168 pobj background,on
R4853 T7171 T7170 amod mixed,background
R4854 T7172 T7163 auxpass were,affected
R4855 T7173 T7174 advmod less,severely
R4856 T7174 T7163 advmod severely,affected
R4857 T7175 T7163 prep compared,affected
R4858 T7176 T7175 prep to,compared
R4859 T7177 T7176 pobj those,to
R4860 T7178 T7177 prep on,those
R4861 T7179 T7180 det the,background
R4862 T7180 T7178 pobj background,on
R4863 T7181 T7180 compound B6,background
R4864 T7182 T7163 punct .,affected
R2000 T3087 T3084 punct ", ",had
R2001 T3088 T3089 nsubj one,had
R2002 T3089 T3084 conj had,had
R2003 T3090 T3091 det some,mucus
R2004 T3091 T3089 dobj mucus,had
R2005 T3092 T3089 punct ", ",had
R2006 T3093 T3089 cc and,had
R2007 T3094 T3095 nsubj two,had
R2008 T3095 T3089 conj had,had
R2009 T3096 T3097 amod moderate,amounts
R2010 T3097 T3095 dobj amounts,had
R2011 T3098 T3097 prep of,amounts
R2012 T3099 T3098 pobj mucus,of
R2013 T3100 T3084 punct .,had
R2014 T3102 T3103 prep Despite,had
R2015 T3104 T3105 det the,variability
R2016 T3105 T3102 pobj variability,Despite
R2017 T3106 T3103 punct ", ",had
R2018 T3107 T3108 predet all,mice
R2019 T3108 T3103 nsubj mice,had
R2020 T3109 T3108 det the,mice
R2021 T3110 T3108 compound CF,mice
R2022 T3111 T3108 prep on,mice
R2023 T3112 T3113 det the,background
R2024 T3113 T3111 pobj background,on
R2025 T3114 T3113 amod mixed,background
R2026 T3115 T3116 amod less,dilation
R2027 T3116 T3103 dobj dilation,had
R2028 T3117 T3116 compound crypt,dilation
R2029 T3118 T3116 cc and,dilation
R2030 T3119 T3120 amod less,accumulation
R2031 T3120 T3116 conj accumulation,dilation
R2032 T3121 T3120 compound mucus,accumulation
R2033 T3122 T3103 prep compared,had
R2034 T3123 T3122 prep to,compared
R2035 T3124 T3125 compound CF,mice
R2036 T3125 T3123 pobj mice,to
R2037 T3126 T3125 prep on,mice
R2038 T3127 T3128 det the,background
R2042 T3132 T3133 advmod Thus,appears
R2043 T3134 T3133 punct ", ",appears
R2044 T3135 T3133 nsubj it,appears
R2045 T3136 T3137 mark that,affect
R2046 T3137 T3133 ccomp affect,appears

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T2718 53-58 UBERON:0000912 denotes mucus
T2719 124-129 NCBITaxon:10088 denotes mouse
T2720 130-145 UBERON:0002108 denotes small intestine
T2721 169-174 UBERON:0000912 denotes mucus
T2722 178-195 UBERON:0001983 denotes intestinal crypts
T2723 225-231 GO_EXT:fatality_or_lethality denotes lethal
T2724 260-265 GO:0016265 denotes death
T2725 275-279 NCBITaxon:10088 denotes mice
T2726 300-304 CHEBI_EXT:33290 denotes chow
T2727 322-335 CHEBI:29149 denotes periodic acid
T2728 399-414 UBERON:0002108 denotes small intestine
T2729 415-422 UBERON:0000479 denotes tissues
T2730 442-451 SO_EXT:wild_type_entity_or_quality denotes wild type
T2731 452-467 UBERON:0002108 denotes small intestine
T2732 497-504 SO_EXT:0000704 denotes genetic
T2733 535-552 UBERON:0001983 denotes intestinal crypts
T2734 611-616 GO_UBERON_EXT:lumen denotes lumen
T2735 669-675 GO_UBERON_EXT:villus denotes villus
T2736 669-686 UBERON:0013636 denotes villus epithelium
T2737 715-727 CL:0000160 denotes goblet cells
T2738 722-727 CL_GO_EXT:cell denotes cells
T2739 757-766 SO_EXT:wild_type_entity_or_quality denotes wild type
T2740 767-774 UBERON:0000479 denotes tissues
T2741 793-802 UBERON:0000160 denotes intestine
T2742 809-813 NCBITaxon:10088 denotes mice
T2743 824-831 SO_EXT:0000704 denotes genetic
T2744 869-875 UBERON:0001983 denotes crypts
T2745 901-906 UBERON:0000912 denotes mucus
T2746 921-925 NCBITaxon:10088 denotes mice
T2747 959-964 UBERON:0000912 denotes mucus
T2748 986-990 NCBITaxon:10088 denotes mice
T2749 1039-1044 UBERON:0000912 denotes mucus
T2750 1051-1055 NCBITaxon:10088 denotes mice
T2751 1098-1103 NCBITaxon:10088 denotes mouse
T2752 1107-1112 NCBITaxon:10088 denotes mouse
T2753 1122-1126 NCBITaxon:10088 denotes mice
T2754 1154-1160 UBERON:0001983 denotes crypts
T2755 1177-1182 UBERON:0000912 denotes mucus
T2756 1191-1196 UBERON:0001983 denotes crypt
T2757 1197-1203 GO_UBERON_EXT:lumen denotes lumina
T2758 1235-1239 NCBITaxon:10088 denotes mice
T2759 1255-1260 UBERON:0000912 denotes mucus
T2760 1268-1274 UBERON:0001983 denotes crypts
T2761 1312-1317 UBERON:0000912 denotes mucus
T2762 1360-1364 NCBITaxon:10088 denotes mice
T2763 1440-1445 UBERON:0000912 denotes mucus
T2764 1460-1465 UBERON:0000912 denotes mucus
T2765 1499-1504 UBERON:0000912 denotes mucus
T2766 1542-1546 NCBITaxon:10088 denotes mice
T2767 1580-1585 UBERON:0001983 denotes crypt
T2768 1604-1609 UBERON:0000912 denotes mucus
T2769 1638-1642 NCBITaxon:10088 denotes mice
T2770 2736-2743 SO_EXT:0000704 denotes genetic
T2771 2804-2813 GO_EXT:secretion_entity_or_process denotes secretion
T2772 2834-2839 UBERON:0000912 denotes mucus
T2773 2850-2865 UBERON:0002108 denotes small intestine
T2774 2938-2942 SO_EXT:0000704 denotes gene
T2775 2938-2953 GO:0010467 denotes gene expression
T2776 2968-2970 GO_EXT:reverse_transcription_or_reverse_transcriptase denotes RT
T2777 2995-2999 CHEBI_SO_EXT:mRNA denotes mRNA
T2778 3000-3010 GO:0010467 denotes expression
T2779 3018-3028 UBERON:0000160 denotes intestinal
T2780 3029-3040 CL:0000160 denotes goblet cell
T2781 3036-3040 CL_GO_EXT:cell denotes cell
T2782 3047-3051 SO_EXT:0000704 denotes gene
T2783 3053-3057 PR_EXT:000010764 denotes Muc2
T2784 3062-3071 SO_EXT:wild_type_entity_or_quality denotes wild type
T2785 3072-3081 UBERON:0000160 denotes intestine
T2786 3086-3090 NCBITaxon:10088 denotes mice
T2787 3111-3117 SO_EXT:sequence_copy_entity denotes copies
T2788 3121-3125 PR_EXT:000010764 denotes Muc2
T2789 3126-3131 GO_PR_EXT:glyceraldehyde_3_phosphate_dehydrogenase denotes GAPDH
T2790 3212-3216 NCBITaxon:10088 denotes mice
T2791 3258-3264 SO_EXT:sequence_copy_entity denotes copies
T2792 3268-3272 PR_EXT:000010764 denotes Muc2
T2793 3273-3277 CHEBI_SO_EXT:mRNA denotes mRNA
T2794 3282-3287 GO_PR_EXT:glyceraldehyde_3_phosphate_dehydrogenase denotes GAPDH
T2795 3388-3393 UBERON:0000912 denotes mucus
T2796 3444-3448 PR_EXT:000010764 denotes Muc2
T2797 3449-3453 CHEBI_SO_EXT:mRNA denotes mRNA
T2798 3464-3479 UBERON:0002108 denotes small intestine
T2799 3601-3606 UBERON:0000912 denotes mucus
T2800 3654-3658 SO_EXT:0000704 denotes gene
T2801 3654-3669 GO:0010467 denotes gene expression
T6930 1706-1721 UBERON:0002108 denotes small intestine
T6931 1725-1734 SO_EXT:wild_type_entity_or_quality denotes wild type
T6932 1742-1746 NCBITaxon:10088 denotes mice
T6933 1764-1771 SO_EXT:0000704 denotes genetic
T6934 1785-1791 UBERON:0000479 denotes Tissue
T6935 1903-1918 UBERON:0002108 denotes small intestine
T6936 1923-1932 SO_EXT:wild_type_entity_or_quality denotes Wild type
T6937 1988-1997 SO_EXT:wild_type_entity_or_quality denotes Wild type
T6938 2071-2080 SO_EXT:wild_type_entity_or_quality denotes wild type
T6939 2081-2087 UBERON:0000479 denotes tissue
T6940 2115-2121 UBERON:0001983 denotes crypts
T6941 2148-2154 GO_UBERON_EXT:lumen denotes lumina
T6942 2179-2185 UBERON:0000479 denotes tissue
T6943 2212-2217 UBERON:0001983 denotes crypt
T6944 2218-2224 GO_UBERON_EXT:lumen denotes lumina
T6945 2274-2279 UBERON:0000912 denotes mucus
T6946 2301-2305 NCBITaxon:10088 denotes mice
T6947 2335-2341 UBERON:0001983 denotes crypts
T6948 2376-2385 SO_EXT:wild_type_entity_or_quality denotes wild type
T6949 2399-2405 UBERON:0001983 denotes crypts
T6950 2445-2449 NCBITaxon:10088 denotes mice
T6951 2494-2500 UBERON:0001983 denotes crypts
T6952 2531-2536 UBERON:0001983 denotes crypt
T6953 2550-2555 UBERON:0000912 denotes mucus
T6954 2590-2594 NCBITaxon:10088 denotes mice
T2716 3-7 NCBITaxon:10088 denotes mice
T2717 42-52 UBERON:0000160 denotes intestinal

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T2657 300-304 CHEBI:33290 denotes chow
T2658 322-335 CHEBI:29149 denotes periodic acid
T2659 399-414 UBERON:0002108 denotes small intestine
T2660 415-422 UBERON:0000479 denotes tissues
T2661 452-467 UBERON:0002108 denotes small intestine
T2662 497-504 SO:0000704 denotes genetic
T2663 535-552 UBERON:0001983 denotes intestinal crypts
T2664 669-686 UBERON:0013636 denotes villus epithelium
T2665 715-727 CL:0000160 denotes goblet cells
T2666 767-774 UBERON:0000479 denotes tissues
T2667 793-802 UBERON:0000160 denotes intestine
T2668 809-813 NCBITaxon:10088 denotes mice
T2669 824-831 SO:0000704 denotes genetic
T2670 869-875 UBERON:0001983 denotes crypts
T2671 901-906 UBERON:0000912 denotes mucus
T2672 921-925 NCBITaxon:10088 denotes mice
T2673 959-964 UBERON:0000912 denotes mucus
T2674 986-990 NCBITaxon:10088 denotes mice
T2675 1039-1044 UBERON:0000912 denotes mucus
T2676 1051-1055 NCBITaxon:10088 denotes mice
T2677 1098-1103 NCBITaxon:10088 denotes mouse
T2678 1107-1112 NCBITaxon:10088 denotes mouse
T2679 1122-1126 NCBITaxon:10088 denotes mice
T2680 1154-1160 UBERON:0001983 denotes crypts
T2681 1177-1182 UBERON:0000912 denotes mucus
T2682 1191-1196 UBERON:0001983 denotes crypt
T2683 1235-1239 NCBITaxon:10088 denotes mice
T2684 1255-1260 UBERON:0000912 denotes mucus
T2685 1268-1274 UBERON:0001983 denotes crypts
T2686 1312-1317 UBERON:0000912 denotes mucus
T2687 1360-1364 NCBITaxon:10088 denotes mice
T2688 1440-1445 UBERON:0000912 denotes mucus
T2689 1460-1465 UBERON:0000912 denotes mucus
T2690 1499-1504 UBERON:0000912 denotes mucus
T2691 1542-1546 NCBITaxon:10088 denotes mice
T2692 1580-1585 UBERON:0001983 denotes crypt
T2693 1604-1609 UBERON:0000912 denotes mucus
T2694 1638-1642 NCBITaxon:10088 denotes mice
T2695 2736-2743 SO:0000704 denotes genetic
T2696 2834-2839 UBERON:0000912 denotes mucus
T2697 2850-2865 UBERON:0002108 denotes small intestine
T2698 2938-2942 SO:0000704 denotes gene
T2699 2938-2953 GO:0010467 denotes gene expression
T2700 3000-3010 GO:0010467 denotes expression
T2701 3018-3028 UBERON:0000160 denotes intestinal
T2702 3029-3040 CL:0000160 denotes goblet cell
T2703 3047-3051 SO:0000704 denotes gene
T2704 3053-3057 PR:000010764 denotes Muc2
T2705 3072-3081 UBERON:0000160 denotes intestine
T2706 3086-3090 NCBITaxon:10088 denotes mice
T2707 3121-3125 PR:000010764 denotes Muc2
T2708 3212-3216 NCBITaxon:10088 denotes mice
T2709 3268-3272 PR:000010764 denotes Muc2
T2710 3388-3393 UBERON:0000912 denotes mucus
T2711 3444-3448 PR:000010764 denotes Muc2
T2712 3464-3479 UBERON:0002108 denotes small intestine
T2713 3601-3606 UBERON:0000912 denotes mucus
T2714 3654-3658 SO:0000704 denotes gene
T2715 3654-3669 GO:0010467 denotes gene expression
T6912 1706-1721 UBERON:0002108 denotes small intestine
T6913 1742-1746 NCBITaxon:10088 denotes mice
T6914 1764-1771 SO:0000704 denotes genetic
T6915 1785-1791 UBERON:0000479 denotes Tissue
T6916 1903-1918 UBERON:0002108 denotes small intestine
T6917 2081-2087 UBERON:0000479 denotes tissue
T6918 2115-2121 UBERON:0001983 denotes crypts
T6919 2179-2185 UBERON:0000479 denotes tissue
T6920 2212-2217 UBERON:0001983 denotes crypt
T6921 2274-2279 UBERON:0000912 denotes mucus
T6922 2301-2305 NCBITaxon:10088 denotes mice
T6923 2335-2341 UBERON:0001983 denotes crypts
T6924 2399-2405 UBERON:0001983 denotes crypts
T6925 2445-2449 NCBITaxon:10088 denotes mice
T6926 2494-2500 UBERON:0001983 denotes crypts
T6927 2531-2536 UBERON:0001983 denotes crypt
T6928 2550-2555 UBERON:0000912 denotes mucus
T6929 2590-2594 NCBITaxon:10088 denotes mice
T2648 3-7 NCBITaxon:10088 denotes mice
T2649 42-52 UBERON:0000160 denotes intestinal
T2650 53-58 UBERON:0000912 denotes mucus
T2651 124-129 NCBITaxon:10088 denotes mouse
T2652 130-145 UBERON:0002108 denotes small intestine
T2653 169-174 UBERON:0000912 denotes mucus
T2654 178-195 UBERON:0001983 denotes intestinal crypts
T2655 260-265 GO:0016265 denotes death
T2656 275-279 NCBITaxon:10088 denotes mice