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PMC:1140370 / 6538-6841 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T2080 0-6 NNS denotes series
T2084 6-7 -RRB- denotes )
T2085 7-8 . denotes .
T2086 8-148 sentence denotes To construct the arrested fork and 3′- or 5′-extension substrates, various combinations of oligonucleotides shown in Table 1 were annealed.
T2087 9-11 TO denotes To
T2088 12-21 VB denotes construct
T2089 139-147 VBN denotes annealed
T2090 22-25 DT denotes the
T2091 35-39 NN denotes fork
T2092 26-34 VBN denotes arrested
T2093 40-43 CC denotes and
T2094 44-45 CD denotes 3
T2095 64-74 NNS denotes substrates
T2096 45-46 SYM denotes ′
T2097 46-47 HYPH denotes -
T2098 48-50 CC denotes or
T2099 51-52 CD denotes 5
T2100 52-53 SYM denotes ′
T2101 53-54 HYPH denotes -
T2102 54-63 NN denotes extension
T2103 74-76 , denotes ,
T2104 76-83 JJ denotes various
T2105 84-96 NNS denotes combinations
T2106 97-99 IN denotes of
T2107 100-116 NNS denotes oligonucleotides
T2108 117-122 VBN denotes shown
T2109 123-125 IN denotes in
T2110 126-131 NN denotes Table
T2111 132-133 CD denotes 1
T2112 134-138 VBD denotes were
T2113 147-148 . denotes .
T2114 148-269 sentence denotes Bub-82/lamin B2 containing the T-rich strand of the lamin B2 origin region was constructed as previously described (13).
T2115 149-152 NN denotes Bub
T2116 162-164 NN denotes B2
T2117 152-153 HYPH denotes -
T2118 153-155 CD denotes 82
T2119 155-156 HYPH denotes /
T2120 156-161 NN denotes lamin
T2121 228-239 VBN denotes constructed
T2122 165-175 VBG denotes containing
T2123 176-179 DT denotes the
T2124 187-193 NN denotes strand
T2125 180-181 NN denotes T
T2126 182-186 JJ denotes rich
T2127 181-182 HYPH denotes -
T2128 194-196 IN denotes of
T2129 197-200 DT denotes the
T2130 217-223 NN denotes region
T2131 201-206 NN denotes lamin
T2132 207-209 NN denotes B2
T2133 210-216 NN denotes origin
T2134 224-227 VBD denotes was
T2135 240-242 IN denotes as
T2136 254-263 VBN denotes described
T2137 243-253 RB denotes previously
T2138 264-265 -LRB- denotes (
T2139 265-267 CD denotes 13
T2140 267-268 -RRB- denotes )
T2141 268-269 . denotes .
T2143 270-273 DT denotes The
T2144 281-290 NN denotes substrate
T2145 274-280 NN denotes bubble
T2147 290-292 , denotes ,
T2148 292-293 NN denotes c
T2149 294-297 NN denotes myc
T2150 293-294 HYPH denotes -
T2151 298-301 NN denotes DUE
T2152 297-298 HYPH denotes /
R1217 T2084 T2080 punct ),series
R1219 T2087 T2088 aux To,construct
R1220 T2088 T2089 advcl construct,annealed
R1221 T2090 T2091 det the,fork
R1222 T2091 T2088 dobj fork,construct
R1223 T2092 T2091 amod arrested,fork
R1224 T2093 T2091 cc and,fork
R1225 T2094 T2095 nummod 3,substrates
R1226 T2095 T2091 conj substrates,fork
R1227 T2096 T2094 punct ′,3
R1228 T2097 T2094 punct -,3
R1229 T2098 T2094 cc or,3
R1230 T2099 T2094 conj 5,3
R1231 T2100 T2099 punct ′,5
R1232 T2101 T2095 punct -,substrates
R1233 T2102 T2095 compound extension,substrates
R1234 T2103 T2089 punct ", ",annealed
R1235 T2104 T2105 amod various,combinations
R1236 T2105 T2089 nsubjpass combinations,annealed
R1237 T2106 T2105 prep of,combinations
R1238 T2107 T2106 pobj oligonucleotides,of
R1239 T2108 T2107 acl shown,oligonucleotides
R1240 T2109 T2108 prep in,shown
R1241 T2110 T2109 pobj Table,in
R1242 T2111 T2110 nummod 1,Table
R1243 T2112 T2089 auxpass were,annealed
R1244 T2113 T2089 punct .,annealed
R1245 T2115 T2116 nmod Bub,B2
R1246 T2116 T2121 nsubjpass B2,constructed
R1247 T2117 T2116 punct -,B2
R1248 T2118 T2116 nummod 82,B2
R1249 T2119 T2116 punct /,B2
R1250 T2120 T2116 compound lamin,B2
R1251 T2122 T2116 acl containing,B2
R1252 T2123 T2124 det the,strand
R1253 T2124 T2122 dobj strand,containing
R1254 T2125 T2126 npadvmod T,rich
R1255 T2126 T2124 amod rich,strand
R1256 T2127 T2126 punct -,rich
R1257 T2128 T2124 prep of,strand
R1258 T2129 T2130 det the,region
R1259 T2130 T2128 pobj region,of
R1260 T2131 T2132 compound lamin,B2
R1261 T2132 T2130 compound B2,region
R1262 T2133 T2130 compound origin,region
R1263 T2134 T2121 auxpass was,constructed
R1264 T2135 T2136 mark as,described
R1265 T2136 T2121 advcl described,constructed
R1266 T2137 T2136 advmod previously,described
R1267 T2138 T2139 punct (,13
R1268 T2139 T2136 parataxis 13,described
R1269 T2140 T2139 punct ),13
R1270 T2141 T2121 punct .,constructed
R1271 T2143 T2144 det The,substrate
R1273 T2145 T2144 compound bubble,substrate
R1274 T2147 T2144 punct ", ",substrate
R1275 T2148 T2149 compound c,myc
R1276 T2149 T2151 compound myc,DUE
R1277 T2150 T2149 punct -,myc
R1278 T2151 T2144 appos DUE,substrate
R1279 T2152 T2151 punct /,DUE

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T1915 35-39 GO:0005657 denotes fork
T1916 44-47 _FRAGMENT denotes 3′-
T1917 54-63 GO:0006272 denotes extension
T1918 51-63 GO:0006273 denotes 5′-extension
T1919 100-116 CHEBI_SO_EXT:oligonucleotide denotes oligonucleotides
T1920 139-147 GO:0097617 denotes annealed
T1921 156-164 PR_EXT:000009861 denotes lamin B2
T1922 180-181 CHEBI_EXT:thymine_nucleobase_or_nucleoside_or_nucleotide_molecular_entity_or_group denotes T
T1923 201-209 PR_EXT:000009861 denotes lamin B2
T1924 210-216 SO_EXT:0000296 denotes origin
T1925 292-297 PR_EXT:000000084 denotes c-myc
R1120 T1917 T1916 _lexicallyChainedTo extension,3′-

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T1860 35-39 GO:0005657 denotes fork
T1861 44-47 _FRAGMENT denotes 3′-
T1862 54-63 GO:0006272 denotes extension
T1863 51-63 GO:0006273 denotes 5′-extension
T1864 139-147 GO:0097617 denotes annealed
T1865 156-164 PR:000009861 denotes lamin B2
T1866 201-209 PR:000009861 denotes lamin B2
T1867 210-216 SO:0000296 denotes origin
T1868 292-297 PR:000000084 denotes c-myc
R1118 T1862 T1861 _lexicallyChainedTo extension,3′-

2_test

Id Subject Object Predicate Lexical cue
15917436-14609960-76775505 265-267 14609960 denotes 13