PMC:1140370 / 5936-6308 JSONTXT

{"project":"craft-sa-dev","denotations":[{"id":"T1983","span":{"begin":0,"end":3},"obj":"DT"},{"id":"T1984","span":{"begin":4,"end":13},"obj":"NNS"},{"id":"T1985","span":{"begin":88,"end":94},"obj":"VBN"},{"id":"T1986","span":{"begin":14,"end":17},"obj":"IN"},{"id":"T1987","span":{"begin":18,"end":21},"obj":"PDT"},{"id":"T1988","span":{"begin":26,"end":42},"obj":"NNS"},{"id":"T1989","span":{"begin":22,"end":25},"obj":"DT"},{"id":"T1990","span":{"begin":43,"end":47},"obj":"VBN"},{"id":"T1991","span":{"begin":48,"end":51},"obj":"IN"},{"id":"T1992","span":{"begin":52,"end":65},"obj":"NNS"},{"id":"T1993","span":{"begin":66,"end":68},"obj":"IN"},{"id":"T1994","span":{"begin":69,"end":72},"obj":"NN"},{"id":"T1995","span":{"begin":73,"end":83},"obj":"NNS"},{"id":"T1996","span":{"begin":84,"end":87},"obj":"VBP"},{"id":"T1997","span":{"begin":95,"end":97},"obj":"IN"},{"id":"T1998","span":{"begin":98,"end":104},"obj":"NNS"},{"id":"T1999","span":{"begin":105,"end":106},"obj":"CD"},{"id":"T2000","span":{"begin":107,"end":110},"obj":"CC"},{"id":"T2001","span":{"begin":111,"end":112},"obj":"CD"},{"id":"T2002","span":{"begin":112,"end":113},"obj":"."},{"id":"T2003","span":{"begin":113,"end":265},"obj":"sentence"},{"id":"T2004","span":{"begin":114,"end":117},"obj":"DT"},{"id":"T2005","span":{"begin":139,"end":149},"obj":"NNS"},{"id":"T2006","span":{"begin":118,"end":125},"obj":"JJ"},{"id":"T2007","span":{"begin":126,"end":138},"obj":"NN"},{"id":"T2008","span":{"begin":155,"end":166},"obj":"VBN"},{"id":"T2009","span":{"begin":150,"end":154},"obj":"VBD"},{"id":"T2010","span":{"begin":167,"end":169},"obj":"IN"},{"id":"T2011","span":{"begin":170,"end":179},"obj":"VBG"},{"id":"T2012","span":{"begin":180,"end":187},"obj":"VBN"},{"id":"T2013","span":{"begin":188,"end":204},"obj":"NNS"},{"id":"T2014","span":{"begin":205,"end":209},"obj":"IN"},{"id":"T2015","span":{"begin":210,"end":217},"obj":"NN"},{"id":"T2016","span":{"begin":243,"end":246},"obj":"NN"},{"id":"T2017","span":{"begin":218,"end":224},"obj":"JJ"},{"id":"T2018","span":{"begin":225,"end":233},"obj":"VBN"},{"id":"T2019","span":{"begin":224,"end":225},"obj":"HYPH"},{"id":"T2020","span":{"begin":234,"end":242},"obj":"JJ"},{"id":"T2021","span":{"begin":247,"end":249},"obj":"CC"},{"id":"T2022","span":{"begin":250,"end":253},"obj":"PRP$"},{"id":"T2023","span":{"begin":254,"end":264},"obj":"NN"},{"id":"T2024","span":{"begin":264,"end":265},"obj":"."},{"id":"T2025","span":{"begin":265,"end":372},"obj":"sentence"},{"id":"T2026","span":{"begin":266,"end":269},"obj":"DT"},{"id":"T2027","span":{"begin":278,"end":288},"obj":"NNS"},{"id":"T2028","span":{"begin":270,"end":277},"obj":"VBN"},{"id":"T2029","span":{"begin":294,"end":302},"obj":"VBN"},{"id":"T2030","span":{"begin":289,"end":293},"obj":"VBD"},{"id":"T2031","span":{"begin":303,"end":305},"obj":"IN"},{"id":"T2032","span":{"begin":306,"end":315},"obj":"NN"},{"id":"T2033","span":{"begin":316,"end":320},"obj":"NN"},{"id":"T2034","span":{"begin":328,"end":342},"obj":"NN"},{"id":"T2035","span":{"begin":321,"end":327},"obj":"NN"},{"id":"T2036","span":{"begin":343,"end":344},"obj":"-LRB-"},{"id":"T2037","span":{"begin":363,"end":370},"obj":"NNP"},{"id":"T2038","span":{"begin":344,"end":352},"obj":"NNP"},{"id":"T2039","span":{"begin":353,"end":362},"obj":"NNP"},{"id":"T2040","span":{"begin":370,"end":371},"obj":"-RRB-"},{"id":"T2041","span":{"begin":371,"end":372},"obj":"."}],"relations":[{"id":"R1125","pred":"det","subj":"T1983","obj":"T1984"},{"id":"R1126","pred":"nsubjpass","subj":"T1984","obj":"T1985"},{"id":"R1127","pred":"prep","subj":"T1986","obj":"T1984"},{"id":"R1128","pred":"predet","subj":"T1987","obj":"T1988"},{"id":"R1129","pred":"pobj","subj":"T1988","obj":"T1986"},{"id":"R1130","pred":"det","subj":"T1989","obj":"T1988"},{"id":"R1131","pred":"acl","subj":"T1990","obj":"T1988"},{"id":"R1132","pred":"prep","subj":"T1991","obj":"T1990"},{"id":"R1133","pred":"pobj","subj":"T1992","obj":"T1991"},{"id":"R1134","pred":"prep","subj":"T1993","obj":"T1992"},{"id":"R1135","pred":"compound","subj":"T1994","obj":"T1995"},{"id":"R1136","pred":"pobj","subj":"T1995","obj":"T1993"},{"id":"R1137","pred":"auxpass","subj":"T1996","obj":"T1985"},{"id":"R1138","pred":"prep","subj":"T1997","obj":"T1985"},{"id":"R1139","pred":"nmod","subj":"T1998","obj":"T1999"},{"id":"R1140","pred":"pobj","subj":"T1999","obj":"T1997"},{"id":"R1141","pred":"cc","subj":"T2000","obj":"T1999"},{"id":"R1142","pred":"conj","subj":"T2001","obj":"T1999"},{"id":"R1143","pred":"punct","subj":"T2002","obj":"T1985"},{"id":"R1144","pred":"det","subj":"T2004","obj":"T2005"},{"id":"R1145","pred":"nsubjpass","subj":"T2005","obj":"T2008"},{"id":"R1146","pred":"amod","subj":"T2006","obj":"T2005"},{"id":"R1147","pred":"compound","subj":"T2007","obj":"T2005"},{"id":"R1148","pred":"auxpass","subj":"T2009","obj":"T2008"},{"id":"R1149","pred":"prep","subj":"T2010","obj":"T2008"},{"id":"R1150","pred":"pcomp","subj":"T2011","obj":"T2010"},{"id":"R1151","pred":"amod","subj":"T2012","obj":"T2013"},{"id":"R1152","pred":"dobj","subj":"T2013","obj":"T2011"},{"id":"R1153","pred":"prep","subj":"T2014","obj":"T2011"},{"id":"R1154","pred":"nmod","subj":"T2015","obj":"T2016"},{"id":"R1155","pred":"pobj","subj":"T2016","obj":"T2014"},{"id":"R1156","pred":"amod","subj":"T2017","obj":"T2018"},{"id":"R1157","pred":"amod","subj":"T2018","obj":"T2016"},{"id":"R1158","pred":"punct","subj":"T2019","obj":"T2018"},{"id":"R1159","pred":"amod","subj":"T2020","obj":"T2016"},{"id":"R1160","pred":"cc","subj":"T2021","obj":"T2016"},{"id":"R1161","pred":"poss","subj":"T2022","obj":"T2023"},{"id":"R1162","pred":"conj","subj":"T2023","obj":"T2016"},{"id":"R1163","pred":"punct","subj":"T2024","obj":"T2008"},{"id":"R1164","pred":"det","subj":"T2026","obj":"T2027"},{"id":"R1165","pred":"nsubjpass","subj":"T2027","obj":"T2029"},{"id":"R1166","pred":"amod","subj":"T2028","obj":"T2027"},{"id":"R1167","pred":"auxpass","subj":"T2030","obj":"T2029"},{"id":"R1168","pred":"agent","subj":"T2031","obj":"T2029"},{"id":"R1169","pred":"compound","subj":"T2032","obj":"T2033"},{"id":"R1170","pred":"compound","subj":"T2033","obj":"T2034"},{"id":"R1171","pred":"pobj","subj":"T2034","obj":"T2031"},{"id":"R1172","pred":"compound","subj":"T2035","obj":"T2034"},{"id":"R1173","pred":"punct","subj":"T2036","obj":"T2037"},{"id":"R1174","pred":"parataxis","subj":"T2037","obj":"T2029"},{"id":"R1175","pred":"compound","subj":"T2038","obj":"T2037"},{"id":"R1176","pred":"compound","subj":"T2039","obj":"T2037"},{"id":"R1177","pred":"punct","subj":"T2040","obj":"T2037"},{"id":"R1178","pred":"punct","subj":"T2041","obj":"T2029"}],"text":"The sequences for all the oligonucleotides used for constructions of DNA substrates are listed in Tables 1 and 2. The partial heteroduplex substrates were constructed by annealing labeled oligonucleotides with M13mp18 single-stranded circular DNA or its derivative. The labeled substrates were purified by Sepharose CL4B column chromatography (Amersham Pharmacia Biotech)."}

{"project":"craft-ca-core-ex-dev","denotations":[{"id":"T1898","span":{"begin":4,"end":13},"obj":"SO_EXT:biological_sequence"},{"id":"T1899","span":{"begin":26,"end":42},"obj":"CHEBI_SO_EXT:oligonucleotide"},{"id":"T1900","span":{"begin":69,"end":72},"obj":"CHEBI_SO_EXT:DNA"},{"id":"T1901","span":{"begin":132,"end":138},"obj":"SO:0000985"},{"id":"T1902","span":{"begin":170,"end":179},"obj":"GO:0097617"},{"id":"T1903","span":{"begin":180,"end":187},"obj":"CHEBI_SO_EXT:molecular_label_or_mark_or_tag_process"},{"id":"T1904","span":{"begin":188,"end":204},"obj":"CHEBI_SO_EXT:oligonucleotide"},{"id":"T1905","span":{"begin":218,"end":233},"obj":"_FRAGMENT"},{"id":"T1906","span":{"begin":243,"end":246},"obj":"CHEBI_SO_EXT:single_stranded_DNA"},{"id":"T1907","span":{"begin":234,"end":242},"obj":"SO:0000988"},{"id":"T1908","span":{"begin":270,"end":277},"obj":"CHEBI_SO_EXT:molecular_label_or_mark_or_tag_process"}],"relations":[{"id":"R1119","pred":"_lexicallyChainedTo","subj":"T1906","obj":"T1905"}],"text":"The sequences for all the oligonucleotides used for constructions of DNA substrates are listed in Tables 1 and 2. The partial heteroduplex substrates were constructed by annealing labeled oligonucleotides with M13mp18 single-stranded circular DNA or its derivative. The labeled substrates were purified by Sepharose CL4B column chromatography (Amersham Pharmacia Biotech)."}

{"project":"craft-ca-core-dev","denotations":[{"id":"T1854","span":{"begin":132,"end":138},"obj":"SO:0000985"},{"id":"T1855","span":{"begin":170,"end":179},"obj":"GO:0097617"},{"id":"T1856","span":{"begin":218,"end":233},"obj":"SO:0000984"},{"id":"T1857","span":{"begin":234,"end":242},"obj":"SO:0000988"}],"text":"The sequences for all the oligonucleotides used for constructions of DNA substrates are listed in Tables 1 and 2. The partial heteroduplex substrates were constructed by annealing labeled oligonucleotides with M13mp18 single-stranded circular DNA or its derivative. The labeled substrates were purified by Sepharose CL4B column chromatography (Amersham Pharmacia Biotech)."}