Id |
Subject |
Object |
Predicate |
Lexical cue |
T9856 |
0-9 |
NN |
denotes |
Substrate |
T9857 |
23-34 |
NN |
denotes |
requirement |
T9858 |
10-13 |
CC |
denotes |
and |
T9859 |
14-22 |
NN |
denotes |
sequence |
T9860 |
35-38 |
IN |
denotes |
for |
T9861 |
39-43 |
NN |
denotes |
Mcm4 |
T9862 |
57-67 |
NN |
denotes |
activation |
T9863 |
43-44 |
HYPH |
denotes |
/ |
T9864 |
44-45 |
CD |
denotes |
6 |
T9865 |
45-46 |
HYPH |
denotes |
/ |
T9866 |
46-47 |
CD |
denotes |
7 |
T9867 |
48-56 |
NN |
denotes |
helicase |
T9868 |
67-245 |
sentence |
denotes |
DNA binding assays indicate that Mcm4/6/7 binds to those substrates containing single-stranded DNA regions regardless of the presence or absence of single-stranded 3′ or 5′ end. |
T9869 |
68-71 |
NN |
denotes |
DNA |
T9870 |
72-79 |
NN |
denotes |
binding |
T9871 |
80-86 |
NNS |
denotes |
assays |
T9872 |
87-95 |
VBP |
denotes |
indicate |
T9873 |
96-100 |
IN |
denotes |
that |
T9874 |
110-115 |
VBZ |
denotes |
binds |
T9875 |
101-105 |
NN |
denotes |
Mcm4 |
T9876 |
105-106 |
HYPH |
denotes |
/ |
T9877 |
106-107 |
CD |
denotes |
6 |
T9878 |
107-108 |
HYPH |
denotes |
/ |
T9879 |
108-109 |
CD |
denotes |
7 |
T9880 |
116-118 |
IN |
denotes |
to |
T9881 |
119-124 |
DT |
denotes |
those |
T9882 |
125-135 |
NNS |
denotes |
substrates |
T9883 |
136-146 |
VBG |
denotes |
containing |
T9884 |
147-153 |
JJ |
denotes |
single |
T9885 |
154-162 |
VBN |
denotes |
stranded |
T9886 |
153-154 |
HYPH |
denotes |
- |
T9887 |
167-174 |
NNS |
denotes |
regions |
T9888 |
163-166 |
NN |
denotes |
DNA |
T9889 |
175-185 |
RB |
denotes |
regardless |
T9890 |
186-188 |
IN |
denotes |
of |
T9891 |
189-192 |
DT |
denotes |
the |
T9892 |
193-201 |
NN |
denotes |
presence |
T9893 |
202-204 |
CC |
denotes |
or |
T9894 |
205-212 |
NN |
denotes |
absence |
T9895 |
213-215 |
IN |
denotes |
of |
T9896 |
216-222 |
JJ |
denotes |
single |
T9897 |
223-231 |
VBN |
denotes |
stranded |
T9898 |
222-223 |
HYPH |
denotes |
- |
T9899 |
241-244 |
NN |
denotes |
end |
T9900 |
232-233 |
CD |
denotes |
3 |
T9901 |
233-234 |
SYM |
denotes |
′ |
T9902 |
235-237 |
CC |
denotes |
or |
T9903 |
238-239 |
CD |
denotes |
5 |
T9904 |
239-240 |
SYM |
denotes |
′ |
T9905 |
244-245 |
. |
denotes |
. |
T9906 |
245-346 |
sentence |
denotes |
Unwinding of the duplex DNA depends on translocation of single-stranded DNA from 3′ to 5′ direction. |
T9907 |
246-255 |
NN |
denotes |
Unwinding |
T9908 |
274-281 |
VBZ |
denotes |
depends |
T9909 |
256-258 |
IN |
denotes |
of |
T9910 |
259-262 |
DT |
denotes |
the |
T9911 |
270-273 |
NN |
denotes |
DNA |
T9912 |
263-269 |
NN |
denotes |
duplex |
T9913 |
282-284 |
IN |
denotes |
on |
T9914 |
285-298 |
NN |
denotes |
translocation |
T9915 |
299-301 |
IN |
denotes |
of |
T9916 |
302-308 |
JJ |
denotes |
single |
T9917 |
309-317 |
VBN |
denotes |
stranded |
T9918 |
308-309 |
HYPH |
denotes |
- |
T9919 |
318-321 |
NN |
denotes |
DNA |
T9920 |
322-326 |
IN |
denotes |
from |
T9921 |
327-328 |
CD |
denotes |
3 |
T9922 |
328-329 |
SYM |
denotes |
′ |
T9923 |
330-332 |
IN |
denotes |
to |
T9924 |
333-334 |
CD |
denotes |
5 |
T9925 |
334-335 |
SYM |
denotes |
′ |
T9926 |
336-345 |
NN |
denotes |
direction |
T9927 |
345-346 |
. |
denotes |
. |
T9928 |
346-482 |
sentence |
denotes |
This is most clearly shown by its helicase action on A-fork[5′] and 3′-extension but not on A-fork[3′], A-fork[3′,5′] nor 5′-extension. |
T9929 |
347-351 |
DT |
denotes |
This |
T9930 |
368-373 |
VBN |
denotes |
shown |
T9931 |
352-354 |
VBZ |
denotes |
is |
T9932 |
355-359 |
RBS |
denotes |
most |
T9933 |
360-367 |
RB |
denotes |
clearly |
T9934 |
374-376 |
IN |
denotes |
by |
T9935 |
377-380 |
PRP$ |
denotes |
its |
T9936 |
390-396 |
NN |
denotes |
action |
T9937 |
381-389 |
NN |
denotes |
helicase |
T9938 |
397-399 |
IN |
denotes |
on |
T9939 |
400-401 |
NN |
denotes |
A |
T9940 |
402-406 |
NN |
denotes |
fork |
T9941 |
401-402 |
HYPH |
denotes |
- |
T9942 |
418-427 |
NN |
denotes |
extension |
T9943 |
406-407 |
-LRB- |
denotes |
[ |
T9944 |
407-408 |
CD |
denotes |
5 |
T9945 |
408-409 |
SYM |
denotes |
′ |
T9946 |
409-410 |
-RRB- |
denotes |
] |
T9947 |
411-414 |
CC |
denotes |
and |
T9948 |
415-416 |
CD |
denotes |
3 |
T9949 |
416-417 |
SYM |
denotes |
′ |
T9950 |
417-418 |
HYPH |
denotes |
- |
T9951 |
428-431 |
CC |
denotes |
but |
T9952 |
432-435 |
RB |
denotes |
not |
T9953 |
436-438 |
IN |
denotes |
on |
T9954 |
439-440 |
NN |
denotes |
A |
T9955 |
441-445 |
NN |
denotes |
fork |
T9956 |
440-441 |
HYPH |
denotes |
- |
T9957 |
472-481 |
NN |
denotes |
extension |
T9958 |
445-446 |
-LRB- |
denotes |
[ |
T9959 |
446-447 |
CD |
denotes |
3 |
T9960 |
447-448 |
SYM |
denotes |
′ |
T9961 |
448-449 |
-RRB- |
denotes |
] |
T9962 |
449-451 |
, |
denotes |
, |
T9963 |
451-452 |
NN |
denotes |
A |
T9964 |
453-457 |
NN |
denotes |
fork |
T9965 |
452-453 |
HYPH |
denotes |
- |
T9966 |
457-458 |
-LRB- |
denotes |
[ |
T9967 |
458-459 |
CD |
denotes |
3 |
T9968 |
459-460 |
SYM |
denotes |
′ |
T9969 |
460-461 |
, |
denotes |
, |
T9970 |
461-462 |
CD |
denotes |
5 |
T9971 |
462-463 |
SYM |
denotes |
′ |
T9972 |
463-464 |
-RRB- |
denotes |
] |
T9973 |
465-468 |
CC |
denotes |
nor |
T9974 |
469-470 |
CD |
denotes |
5 |
T9975 |
470-471 |
SYM |
denotes |
′ |
T9976 |
471-472 |
HYPH |
denotes |
- |
T9977 |
481-482 |
. |
denotes |
. |
T9978 |
482-643 |
sentence |
denotes |
However, it does not necessarily require 3′ end of single-stranded DNA, since Mcm4/6/7 can displace annealing oligonucleotide on a circular single-stranded DNA. |
T9979 |
483-490 |
RB |
denotes |
However |
T9980 |
516-523 |
VB |
denotes |
require |
T9981 |
490-492 |
, |
denotes |
, |
T9982 |
492-494 |
PRP |
denotes |
it |
T9983 |
495-499 |
VBZ |
denotes |
does |
T9984 |
500-503 |
RB |
denotes |
not |
T9985 |
504-515 |
RB |
denotes |
necessarily |
T9986 |
524-525 |
CD |
denotes |
3 |
T9987 |
527-530 |
NN |
denotes |
end |
T9988 |
525-526 |
SYM |
denotes |
′ |
T9989 |
531-533 |
IN |
denotes |
of |
T9990 |
534-540 |
JJ |
denotes |
single |
T9991 |
541-549 |
VBN |
denotes |
stranded |
T9992 |
540-541 |
HYPH |
denotes |
- |
T9993 |
550-553 |
NN |
denotes |
DNA |
T9994 |
553-555 |
, |
denotes |
, |
T9995 |
555-560 |
IN |
denotes |
since |
T9996 |
574-582 |
VB |
denotes |
displace |
T9997 |
561-565 |
NN |
denotes |
Mcm4 |
T9998 |
565-566 |
HYPH |
denotes |
/ |
T9999 |
566-567 |
CD |
denotes |
6 |
T10000 |
567-568 |
HYPH |
denotes |
/ |
T10001 |
568-569 |
CD |
denotes |
7 |
T10002 |
570-573 |
MD |
denotes |
can |
T10003 |
583-592 |
VBG |
denotes |
annealing |
T10004 |
593-608 |
NN |
denotes |
oligonucleotide |
T10005 |
609-611 |
IN |
denotes |
on |
T10006 |
612-613 |
DT |
denotes |
a |
T10007 |
639-642 |
NN |
denotes |
DNA |
T10008 |
614-622 |
JJ |
denotes |
circular |
T10009 |
623-629 |
JJ |
denotes |
single |
T10010 |
630-638 |
VBN |
denotes |
stranded |
T10011 |
629-630 |
HYPH |
denotes |
- |
T10012 |
642-643 |
. |
denotes |
. |
T10013 |
643-801 |
sentence |
denotes |
The ability of the mouse Mcm4/6/7 to unwind 3′-extension is shared by the archaeal Mcm helicase but not by Mcm4/6/7 from S.pombe and S.cerevisiae (14,26,27). |
T10014 |
644-647 |
DT |
denotes |
The |
T10015 |
648-655 |
NN |
denotes |
ability |
T10016 |
704-710 |
VBN |
denotes |
shared |
T10017 |
656-658 |
IN |
denotes |
of |
T10018 |
659-662 |
DT |
denotes |
the |
T10019 |
669-673 |
NN |
denotes |
Mcm4 |
T10020 |
663-668 |
NN |
denotes |
mouse |
T10021 |
673-674 |
HYPH |
denotes |
/ |
T10022 |
674-675 |
CD |
denotes |
6 |
T10023 |
675-676 |
HYPH |
denotes |
/ |
T10024 |
676-677 |
CD |
denotes |
7 |
T10025 |
678-680 |
TO |
denotes |
to |
T10026 |
681-687 |
VB |
denotes |
unwind |
T10027 |
688-689 |
CD |
denotes |
3 |
T10028 |
691-700 |
NN |
denotes |
extension |
T10029 |
689-690 |
SYM |
denotes |
′ |
T10030 |
690-691 |
HYPH |
denotes |
- |
T10031 |
701-703 |
VBZ |
denotes |
is |
T10032 |
711-713 |
IN |
denotes |
by |
T10033 |
714-717 |
DT |
denotes |
the |
T10034 |
731-739 |
NN |
denotes |
helicase |
T10035 |
718-726 |
JJ |
denotes |
archaeal |
T10036 |
727-730 |
NN |
denotes |
Mcm |
T10037 |
740-743 |
CC |
denotes |
but |
T10038 |
744-747 |
RB |
denotes |
not |
T10039 |
748-750 |
IN |
denotes |
by |
T10040 |
751-755 |
NN |
denotes |
Mcm4 |
T10041 |
755-756 |
HYPH |
denotes |
/ |
T10042 |
756-757 |
CD |
denotes |
6 |
T10043 |
757-758 |
HYPH |
denotes |
/ |
T10044 |
758-759 |
CD |
denotes |
7 |
T10045 |
760-764 |
IN |
denotes |
from |
T10046 |
765-772 |
NNP |
denotes |
S.pombe |
T10047 |
773-776 |
CC |
denotes |
and |
T10048 |
777-789 |
NNP |
denotes |
S.cerevisiae |
T10049 |
790-791 |
-LRB- |
denotes |
( |
T10050 |
797-799 |
CD |
denotes |
27 |
T10051 |
791-793 |
CD |
denotes |
14 |
T10052 |
793-794 |
, |
denotes |
, |
T10053 |
794-796 |
CD |
denotes |
26 |
T10054 |
796-797 |
, |
denotes |
, |
T10055 |
799-800 |
-RRB- |
denotes |
) |
T10056 |
800-801 |
. |
denotes |
. |
T10057 |
801-950 |
sentence |
denotes |
The archaeal Mcm can unwind A-fork[3′] but eukaryotic Mcm4/6/7 cannot, since the former binds to double-stranded DNA but the latter does not (5,27). |
T10058 |
802-805 |
DT |
denotes |
The |
T10059 |
815-818 |
NN |
denotes |
Mcm |
T10060 |
806-814 |
JJ |
denotes |
archaeal |
T10061 |
823-829 |
VB |
denotes |
unwind |
T10062 |
819-822 |
MD |
denotes |
can |
T10063 |
830-831 |
NN |
denotes |
A |
T10064 |
832-836 |
NN |
denotes |
fork |
T10065 |
831-832 |
HYPH |
denotes |
- |
T10066 |
836-837 |
-LRB- |
denotes |
[ |
T10067 |
837-838 |
CD |
denotes |
3 |
T10068 |
838-839 |
SYM |
denotes |
′ |
T10069 |
839-840 |
-RRB- |
denotes |
] |
T10070 |
841-844 |
CC |
denotes |
but |
T10071 |
845-855 |
JJ |
denotes |
eukaryotic |
T10072 |
856-860 |
NN |
denotes |
Mcm4 |
T10073 |
865-868 |
MD |
denotes |
can |
T10074 |
860-861 |
HYPH |
denotes |
/ |
T10075 |
861-862 |
CD |
denotes |
6 |
T10076 |
862-863 |
HYPH |
denotes |
/ |
T10077 |
863-864 |
CD |
denotes |
7 |
T10078 |
868-871 |
RB |
denotes |
not |
T10079 |
871-873 |
, |
denotes |
, |
T10080 |
873-878 |
IN |
denotes |
since |
T10081 |
890-895 |
VBZ |
denotes |
binds |
T10082 |
879-882 |
DT |
denotes |
the |
T10083 |
883-889 |
NN |
denotes |
former |
T10084 |
896-898 |
IN |
denotes |
to |
T10085 |
899-905 |
JJ |
denotes |
double |
T10086 |
906-914 |
VBN |
denotes |
stranded |
T10087 |
905-906 |
HYPH |
denotes |
- |
T10088 |
915-918 |
NN |
denotes |
DNA |
T10089 |
919-922 |
CC |
denotes |
but |
T10090 |
923-926 |
DT |
denotes |
the |
T10091 |
927-933 |
JJ |
denotes |
latter |
T10092 |
946-948 |
CD |
denotes |
27 |
T10093 |
934-938 |
VBZ |
denotes |
does |
T10094 |
939-942 |
RB |
denotes |
not |
T10095 |
943-944 |
-LRB- |
denotes |
( |
T10096 |
944-945 |
CD |
denotes |
5 |
T10097 |
945-946 |
, |
denotes |
, |
T10098 |
948-949 |
-RRB- |
denotes |
) |
T10099 |
949-950 |
. |
denotes |
. |
T10100 |
950-1080 |
sentence |
denotes |
While yeast Mcm helicases can translocate on duplex DNA, such activity was not observed with mammalian Mcm4/6/7 (data not shown). |
T10101 |
951-956 |
IN |
denotes |
While |
T10102 |
981-992 |
VB |
denotes |
translocate |
T10103 |
957-962 |
NN |
denotes |
yeast |
T10104 |
963-966 |
NN |
denotes |
Mcm |
T10105 |
967-976 |
NNS |
denotes |
helicases |
T10106 |
977-980 |
MD |
denotes |
can |
T10107 |
1030-1038 |
VBN |
denotes |
observed |
T10108 |
993-995 |
IN |
denotes |
on |
T10109 |
996-1002 |
NN |
denotes |
duplex |
T10110 |
1003-1006 |
NN |
denotes |
DNA |
T10111 |
1006-1008 |
, |
denotes |
, |
T10112 |
1008-1012 |
JJ |
denotes |
such |
T10113 |
1013-1021 |
NN |
denotes |
activity |
T10114 |
1022-1025 |
VBD |
denotes |
was |
T10115 |
1026-1029 |
RB |
denotes |
not |
T10116 |
1039-1043 |
IN |
denotes |
with |
T10117 |
1044-1053 |
JJ |
denotes |
mammalian |
T10118 |
1054-1058 |
NN |
denotes |
Mcm4 |
T10119 |
1058-1059 |
HYPH |
denotes |
/ |
T10120 |
1059-1060 |
CD |
denotes |
6 |
T10121 |
1060-1061 |
HYPH |
denotes |
/ |
T10122 |
1061-1062 |
CD |
denotes |
7 |
T10123 |
1063-1064 |
-LRB- |
denotes |
( |
T10124 |
1073-1078 |
VBN |
denotes |
shown |
T10125 |
1064-1068 |
NNS |
denotes |
data |
T10126 |
1069-1072 |
RB |
denotes |
not |
T10127 |
1078-1079 |
-RRB- |
denotes |
) |
T10128 |
1079-1080 |
. |
denotes |
. |
T10129 |
1080-1417 |
sentence |
denotes |
Occurrence of AT-rich sequences, with asymmetric distribution of adenine and thymine, near the replication origins, lead us to propose that Mcm may play a role in selection of initiation sites of mammalian DNA replication, and prompted us to examine the ability of sequences from human replication origins to activate Mcm4/6/7 helicase. |
T10130 |
1081-1091 |
NN |
denotes |
Occurrence |
T10131 |
1197-1201 |
VBP |
denotes |
lead |
T10132 |
1092-1094 |
IN |
denotes |
of |
T10133 |
1095-1097 |
NN |
denotes |
AT |
T10134 |
1098-1102 |
JJ |
denotes |
rich |
T10135 |
1097-1098 |
HYPH |
denotes |
- |
T10136 |
1103-1112 |
NNS |
denotes |
sequences |
T10137 |
1112-1114 |
, |
denotes |
, |
T10138 |
1114-1118 |
IN |
denotes |
with |
T10139 |
1119-1129 |
JJ |
denotes |
asymmetric |
T10140 |
1130-1142 |
NN |
denotes |
distribution |
T10141 |
1143-1145 |
IN |
denotes |
of |
T10142 |
1146-1153 |
NN |
denotes |
adenine |
T10143 |
1154-1157 |
CC |
denotes |
and |
T10144 |
1158-1165 |
NN |
denotes |
thymine |
T10145 |
1165-1167 |
, |
denotes |
, |
T10146 |
1167-1171 |
IN |
denotes |
near |
T10147 |
1172-1175 |
DT |
denotes |
the |
T10148 |
1188-1195 |
NNS |
denotes |
origins |
T10149 |
1176-1187 |
NN |
denotes |
replication |
T10150 |
1195-1197 |
, |
denotes |
, |
T10151 |
1202-1204 |
PRP |
denotes |
us |
T10152 |
1205-1207 |
TO |
denotes |
to |
T10153 |
1208-1215 |
VB |
denotes |
propose |
T10154 |
1216-1220 |
IN |
denotes |
that |
T10155 |
1229-1233 |
VB |
denotes |
play |
T10156 |
1221-1224 |
NNP |
denotes |
Mcm |
T10157 |
1225-1228 |
MD |
denotes |
may |
T10158 |
1234-1235 |
DT |
denotes |
a |
T10159 |
1236-1240 |
NN |
denotes |
role |
T10160 |
1241-1243 |
IN |
denotes |
in |
T10161 |
1244-1253 |
NN |
denotes |
selection |
T10162 |
1254-1256 |
IN |
denotes |
of |
T10163 |
1257-1267 |
NN |
denotes |
initiation |
T10164 |
1268-1273 |
NNS |
denotes |
sites |
T10165 |
1274-1276 |
IN |
denotes |
of |
T10166 |
1277-1286 |
JJ |
denotes |
mammalian |
T10167 |
1287-1290 |
NN |
denotes |
DNA |
T10168 |
1291-1302 |
NN |
denotes |
replication |
T10169 |
1302-1304 |
, |
denotes |
, |
T10170 |
1304-1307 |
CC |
denotes |
and |
T10171 |
1308-1316 |
VBD |
denotes |
prompted |
T10172 |
1317-1319 |
PRP |
denotes |
us |
T10173 |
1320-1322 |
TO |
denotes |
to |
T10174 |
1323-1330 |
VB |
denotes |
examine |
T10175 |
1331-1334 |
DT |
denotes |
the |
T10176 |
1335-1342 |
NN |
denotes |
ability |
T10177 |
1343-1345 |
IN |
denotes |
of |
T10178 |
1346-1355 |
NNS |
denotes |
sequences |
T10179 |
1356-1360 |
IN |
denotes |
from |
T10180 |
1361-1366 |
JJ |
denotes |
human |
T10181 |
1379-1386 |
NNS |
denotes |
origins |
T10182 |
1367-1378 |
NN |
denotes |
replication |
T10183 |
1387-1389 |
TO |
denotes |
to |
T10184 |
1390-1398 |
VB |
denotes |
activate |
T10185 |
1399-1403 |
NN |
denotes |
Mcm4 |
T10186 |
1408-1416 |
NN |
denotes |
helicase |
T10187 |
1403-1404 |
HYPH |
denotes |
/ |
T10188 |
1404-1405 |
CD |
denotes |
6 |
T10189 |
1405-1406 |
HYPH |
denotes |
/ |
T10190 |
1406-1407 |
CD |
denotes |
7 |
T10191 |
1416-1417 |
. |
denotes |
. |
T10192 |
1417-1506 |
sentence |
denotes |
Both lamin-B2 and c-myc origins served as efficient activator for Mcm helicase in vitro. |
T10193 |
1418-1422 |
CC |
denotes |
Both |
T10194 |
1429-1431 |
NN |
denotes |
B2 |
T10195 |
1423-1428 |
NN |
denotes |
lamin |
T10196 |
1428-1429 |
HYPH |
denotes |
- |
T10197 |
1442-1449 |
NNS |
denotes |
origins |
T10198 |
1432-1435 |
CC |
denotes |
and |
T10199 |
1436-1437 |
NN |
denotes |
c |
T10200 |
1438-1441 |
NN |
denotes |
myc |
T10201 |
1437-1438 |
HYPH |
denotes |
- |
T10202 |
1450-1456 |
VBD |
denotes |
served |
T10203 |
1457-1459 |
IN |
denotes |
as |
T10204 |
1460-1469 |
JJ |
denotes |
efficient |
T10205 |
1470-1479 |
NN |
denotes |
activator |
T10206 |
1480-1483 |
IN |
denotes |
for |
T10207 |
1484-1487 |
NN |
denotes |
Mcm |
T10208 |
1488-1496 |
NN |
denotes |
helicase |
T10209 |
1497-1499 |
FW |
denotes |
in |
T10210 |
1500-1505 |
FW |
denotes |
vitro |
T10211 |
1505-1506 |
. |
denotes |
. |
T10212 |
1506-1635 |
sentence |
denotes |
Consistent with it, site-specific loading of Mcm in the DNA replication initiation zone of the c-myc was recently reported (33). |
T10213 |
1507-1517 |
JJ |
denotes |
Consistent |
T10214 |
1621-1629 |
VBN |
denotes |
reported |
T10215 |
1518-1522 |
IN |
denotes |
with |
T10216 |
1523-1525 |
PRP |
denotes |
it |
T10217 |
1525-1527 |
, |
denotes |
, |
T10218 |
1527-1531 |
NN |
denotes |
site |
T10219 |
1532-1540 |
JJ |
denotes |
specific |
T10220 |
1531-1532 |
HYPH |
denotes |
- |
T10221 |
1541-1548 |
NN |
denotes |
loading |
T10222 |
1549-1551 |
IN |
denotes |
of |
T10223 |
1552-1555 |
NN |
denotes |
Mcm |
T10224 |
1556-1558 |
IN |
denotes |
in |
T10225 |
1559-1562 |
DT |
denotes |
the |
T10226 |
1590-1594 |
NN |
denotes |
zone |
T10227 |
1563-1566 |
NN |
denotes |
DNA |
T10228 |
1579-1589 |
NN |
denotes |
initiation |
T10229 |
1567-1578 |
NN |
denotes |
replication |
T10230 |
1595-1597 |
IN |
denotes |
of |
T10231 |
1598-1601 |
DT |
denotes |
the |
T10232 |
1604-1607 |
NN |
denotes |
myc |
T10233 |
1602-1603 |
NN |
denotes |
c |
T10234 |
1603-1604 |
HYPH |
denotes |
- |
T10235 |
1608-1611 |
VBD |
denotes |
was |
T10236 |
1612-1620 |
RB |
denotes |
recently |
T10237 |
1630-1631 |
-LRB- |
denotes |
( |
T10238 |
1631-1633 |
CD |
denotes |
33 |
T10239 |
1633-1634 |
-RRB- |
denotes |
) |
T10240 |
1634-1635 |
. |
denotes |
. |
T10241 |
1635-1753 |
sentence |
denotes |
We have examined in detail the effect of sequence context of the single-stranded DNA on the helicase activity of Mcm. |
T10242 |
1636-1638 |
PRP |
denotes |
We |
T10243 |
1644-1652 |
VBN |
denotes |
examined |
T10244 |
1639-1643 |
VBP |
denotes |
have |
T10245 |
1653-1655 |
IN |
denotes |
in |
T10246 |
1656-1662 |
NN |
denotes |
detail |
T10247 |
1663-1666 |
DT |
denotes |
the |
T10248 |
1667-1673 |
NN |
denotes |
effect |
T10249 |
1674-1676 |
IN |
denotes |
of |
T10250 |
1677-1685 |
NN |
denotes |
sequence |
T10251 |
1686-1693 |
NN |
denotes |
context |
T10252 |
1694-1696 |
IN |
denotes |
of |
T10253 |
1697-1700 |
DT |
denotes |
the |
T10254 |
1717-1720 |
NN |
denotes |
DNA |
T10255 |
1701-1707 |
JJ |
denotes |
single |
T10256 |
1708-1716 |
VBN |
denotes |
stranded |
T10257 |
1707-1708 |
HYPH |
denotes |
- |
T10258 |
1721-1723 |
IN |
denotes |
on |
T10259 |
1724-1727 |
DT |
denotes |
the |
T10260 |
1737-1745 |
NN |
denotes |
activity |
T10261 |
1728-1736 |
NN |
denotes |
helicase |
T10262 |
1746-1748 |
IN |
denotes |
of |
T10263 |
1749-1752 |
NN |
denotes |
Mcm |
T10264 |
1752-1753 |
. |
denotes |
. |
T10265 |
1753-1851 |
sentence |
denotes |
The results indicate that thymine content of 50% is sufficient for the maximum helicase activity. |
T10266 |
1754-1757 |
DT |
denotes |
The |
T10267 |
1758-1765 |
NNS |
denotes |
results |
T10268 |
1766-1774 |
VBP |
denotes |
indicate |
T10269 |
1775-1779 |
IN |
denotes |
that |
T10270 |
1803-1805 |
VBZ |
denotes |
is |
T10271 |
1780-1787 |
NN |
denotes |
thymine |
T10272 |
1788-1795 |
NN |
denotes |
content |
T10273 |
1796-1798 |
IN |
denotes |
of |
T10274 |
1799-1801 |
CD |
denotes |
50 |
T10275 |
1801-1802 |
NN |
denotes |
% |
T10276 |
1806-1816 |
JJ |
denotes |
sufficient |
T10277 |
1817-1820 |
IN |
denotes |
for |
T10278 |
1821-1824 |
DT |
denotes |
the |
T10279 |
1842-1850 |
NN |
denotes |
activity |
T10280 |
1825-1832 |
JJ |
denotes |
maximum |
T10281 |
1833-1841 |
NN |
denotes |
helicase |
T10282 |
1850-1851 |
. |
denotes |
. |
T10283 |
1851-1957 |
sentence |
denotes |
The efficiency of displacement decreased as the thymine content of the 3′-tail dropped to 33% (Figure 6). |
T10284 |
1852-1855 |
DT |
denotes |
The |
T10285 |
1856-1866 |
NN |
denotes |
efficiency |
T10286 |
1883-1892 |
VBD |
denotes |
decreased |
T10287 |
1867-1869 |
IN |
denotes |
of |
T10288 |
1870-1882 |
NN |
denotes |
displacement |
T10289 |
1893-1895 |
IN |
denotes |
as |
T10290 |
1931-1938 |
VBD |
denotes |
dropped |
T10291 |
1896-1899 |
DT |
denotes |
the |
T10292 |
1908-1915 |
NN |
denotes |
content |
T10293 |
1900-1907 |
NN |
denotes |
thymine |
T10294 |
1916-1918 |
IN |
denotes |
of |
T10295 |
1919-1922 |
DT |
denotes |
the |
T10296 |
1926-1930 |
NN |
denotes |
tail |
T10297 |
1923-1924 |
CD |
denotes |
3 |
T10298 |
1924-1925 |
SYM |
denotes |
′ |
T10299 |
1925-1926 |
HYPH |
denotes |
- |
T10300 |
1939-1941 |
IN |
denotes |
to |
T10301 |
1942-1944 |
CD |
denotes |
33 |
T10302 |
1944-1945 |
NN |
denotes |
% |
T10303 |
1946-1947 |
-LRB- |
denotes |
( |
T10304 |
1947-1953 |
NN |
denotes |
Figure |
T10305 |
1954-1955 |
CD |
denotes |
6 |
T10306 |
1955-1956 |
-RRB- |
denotes |
) |
T10307 |
1956-1957 |
. |
denotes |
. |
T10308 |
1957-2101 |
sentence |
denotes |
The stretches of thymine residues may not be necessarily required, since repeats of TC dinucleotides served as a potent activator for Mcm4/6/7. |
T10309 |
1958-1961 |
DT |
denotes |
The |
T10310 |
1962-1971 |
NNS |
denotes |
stretches |
T10311 |
2015-2023 |
VBN |
denotes |
required |
T10312 |
1972-1974 |
IN |
denotes |
of |
T10313 |
1975-1982 |
NN |
denotes |
thymine |
T10314 |
1983-1991 |
NNS |
denotes |
residues |
T10315 |
1992-1995 |
MD |
denotes |
may |
T10316 |
1996-1999 |
RB |
denotes |
not |
T10317 |
2000-2002 |
VB |
denotes |
be |
T10318 |
2003-2014 |
RB |
denotes |
necessarily |
T10319 |
2023-2025 |
, |
denotes |
, |
T10320 |
2025-2030 |
IN |
denotes |
since |
T10321 |
2059-2065 |
VBD |
denotes |
served |
T10322 |
2031-2038 |
NNS |
denotes |
repeats |
T10323 |
2039-2041 |
IN |
denotes |
of |
T10324 |
2042-2044 |
NN |
denotes |
TC |
T10325 |
2045-2058 |
NNS |
denotes |
dinucleotides |
T10326 |
2066-2068 |
IN |
denotes |
as |
T10327 |
2069-2070 |
DT |
denotes |
a |
T10328 |
2078-2087 |
NN |
denotes |
activator |
T10329 |
2071-2077 |
JJ |
denotes |
potent |
T10330 |
2088-2091 |
IN |
denotes |
for |
T10331 |
2092-2096 |
NN |
denotes |
Mcm4 |
T10332 |
2096-2097 |
HYPH |
denotes |
/ |
T10333 |
2097-2098 |
CD |
denotes |
6 |
T10334 |
2098-2099 |
HYPH |
denotes |
/ |
T10335 |
2099-2100 |
CD |
denotes |
7 |
T10336 |
2100-2101 |
. |
denotes |
. |
T10337 |
2101-2226 |
sentence |
denotes |
We also noticed that the presence of a secondary structure within the single-stranded DNA is inhibitory for helicase action. |
T10338 |
2102-2104 |
PRP |
denotes |
We |
T10339 |
2110-2117 |
VBD |
denotes |
noticed |
T10340 |
2105-2109 |
RB |
denotes |
also |
T10341 |
2118-2122 |
IN |
denotes |
that |
T10342 |
2192-2194 |
VBZ |
denotes |
is |
T10343 |
2123-2126 |
DT |
denotes |
the |
T10344 |
2127-2135 |
NN |
denotes |
presence |
T10345 |
2136-2138 |
IN |
denotes |
of |
T10346 |
2139-2140 |
DT |
denotes |
a |
T10347 |
2151-2160 |
NN |
denotes |
structure |
T10348 |
2141-2150 |
JJ |
denotes |
secondary |
T10349 |
2161-2167 |
IN |
denotes |
within |
T10350 |
2168-2171 |
DT |
denotes |
the |
T10351 |
2188-2191 |
NN |
denotes |
DNA |
T10352 |
2172-2178 |
JJ |
denotes |
single |
T10353 |
2179-2187 |
VBN |
denotes |
stranded |
T10354 |
2178-2179 |
HYPH |
denotes |
- |
T10355 |
2195-2205 |
JJ |
denotes |
inhibitory |
T10356 |
2206-2209 |
IN |
denotes |
for |
T10357 |
2210-2218 |
NN |
denotes |
helicase |
T10358 |
2219-2225 |
NN |
denotes |
action |
T10359 |
2225-2226 |
. |
denotes |
. |
T10360 |
2226-2338 |
sentence |
denotes |
Nuclease footprinting assays indicated that binding was interfered by the secondary structure (data not shown). |
T10361 |
2227-2235 |
NN |
denotes |
Nuclease |
T10362 |
2236-2248 |
NN |
denotes |
footprinting |
T10363 |
2249-2255 |
NNS |
denotes |
assays |
T10364 |
2256-2265 |
VBD |
denotes |
indicated |
T10365 |
2266-2270 |
IN |
denotes |
that |
T10366 |
2283-2293 |
VBN |
denotes |
interfered |
T10367 |
2271-2278 |
NN |
denotes |
binding |
T10368 |
2279-2282 |
VBD |
denotes |
was |
T10369 |
2294-2296 |
IN |
denotes |
by |
T10370 |
2297-2300 |
DT |
denotes |
the |
T10371 |
2311-2320 |
NN |
denotes |
structure |
T10372 |
2301-2310 |
JJ |
denotes |
secondary |
T10373 |
2321-2322 |
-LRB- |
denotes |
( |
T10374 |
2331-2336 |
VBN |
denotes |
shown |
T10375 |
2322-2326 |
NNS |
denotes |
data |
T10376 |
2327-2330 |
RB |
denotes |
not |
T10377 |
2336-2337 |
-RRB- |
denotes |
) |
T10378 |
2337-2338 |
. |
denotes |
. |
T10379 |
2338-2746 |
sentence |
denotes |
Thus, we have concluded that Mcm4/6/7 helicase is most efficiently activated by non-structured single-stranded DNA with thymine content of 50% or more, although significant stimulation is observed also by DNA with less thymine content (Figure 7), suggesting that the sequence specificity for Mcm helicase activation is rather relaxed and that the extent of the activation may depend on the sequence context. |
T10380 |
2339-2343 |
RB |
denotes |
Thus |
T10381 |
2353-2362 |
VBN |
denotes |
concluded |
T10382 |
2343-2345 |
, |
denotes |
, |
T10383 |
2345-2347 |
PRP |
denotes |
we |
T10384 |
2348-2352 |
VBP |
denotes |
have |
T10385 |
2363-2367 |
IN |
denotes |
that |
T10386 |
2406-2415 |
VBN |
denotes |
activated |
T10387 |
2368-2372 |
NN |
denotes |
Mcm4 |
T10388 |
2377-2385 |
NN |
denotes |
helicase |
T10389 |
2372-2373 |
HYPH |
denotes |
/ |
T10390 |
2373-2374 |
CD |
denotes |
6 |
T10391 |
2374-2375 |
HYPH |
denotes |
/ |
T10392 |
2375-2376 |
CD |
denotes |
7 |
T10393 |
2386-2388 |
VBZ |
denotes |
is |
T10394 |
2389-2393 |
RBS |
denotes |
most |
T10395 |
2394-2405 |
RB |
denotes |
efficiently |
T10396 |
2416-2418 |
IN |
denotes |
by |
T10397 |
2419-2433 |
JJ |
denotes |
non-structured |
T10398 |
2450-2453 |
NN |
denotes |
DNA |
T10399 |
2434-2440 |
JJ |
denotes |
single |
T10400 |
2441-2449 |
VBN |
denotes |
stranded |
T10401 |
2440-2441 |
HYPH |
denotes |
- |
T10402 |
2454-2458 |
IN |
denotes |
with |
T10403 |
2459-2466 |
NN |
denotes |
thymine |
T10404 |
2467-2474 |
NN |
denotes |
content |
T10405 |
2475-2477 |
IN |
denotes |
of |
T10406 |
2478-2480 |
CD |
denotes |
50 |
T10407 |
2480-2481 |
NN |
denotes |
% |
T10408 |
2482-2484 |
CC |
denotes |
or |
T10409 |
2485-2489 |
JJR |
denotes |
more |
T10410 |
2489-2491 |
, |
denotes |
, |
T10411 |
2491-2499 |
IN |
denotes |
although |
T10412 |
2527-2535 |
VBN |
denotes |
observed |
T10413 |
2500-2511 |
JJ |
denotes |
significant |
T10414 |
2512-2523 |
NN |
denotes |
stimulation |
T10415 |
2524-2526 |
VBZ |
denotes |
is |
T10416 |
2536-2540 |
RB |
denotes |
also |
T10417 |
2541-2543 |
IN |
denotes |
by |
T10418 |
2544-2547 |
NN |
denotes |
DNA |
T10419 |
2548-2552 |
IN |
denotes |
with |
T10420 |
2553-2557 |
JJR |
denotes |
less |
T10421 |
2566-2573 |
NN |
denotes |
content |
T10422 |
2558-2565 |
NN |
denotes |
thymine |
T10423 |
2574-2575 |
-LRB- |
denotes |
( |
T10424 |
2575-2581 |
NN |
denotes |
Figure |
T10425 |
2582-2583 |
CD |
denotes |
7 |
T10426 |
2583-2584 |
-RRB- |
denotes |
) |
T10427 |
2584-2586 |
, |
denotes |
, |
T10428 |
2586-2596 |
VBG |
denotes |
suggesting |
T10429 |
2597-2601 |
IN |
denotes |
that |
T10430 |
2655-2657 |
VBZ |
denotes |
is |
T10431 |
2602-2605 |
DT |
denotes |
the |
T10432 |
2615-2626 |
NN |
denotes |
specificity |
T10433 |
2606-2614 |
NN |
denotes |
sequence |
T10434 |
2627-2630 |
IN |
denotes |
for |
T10435 |
2631-2634 |
NN |
denotes |
Mcm |
T10436 |
2635-2643 |
NN |
denotes |
helicase |
T10437 |
2644-2654 |
NN |
denotes |
activation |
T10438 |
2658-2664 |
RB |
denotes |
rather |
T10439 |
2665-2672 |
JJ |
denotes |
relaxed |
T10440 |
2673-2676 |
CC |
denotes |
and |
T10441 |
2677-2681 |
IN |
denotes |
that |
T10442 |
2715-2721 |
VB |
denotes |
depend |
T10443 |
2682-2685 |
DT |
denotes |
the |
T10444 |
2686-2692 |
NN |
denotes |
extent |
T10445 |
2693-2695 |
IN |
denotes |
of |
T10446 |
2696-2699 |
DT |
denotes |
the |
T10447 |
2700-2710 |
NN |
denotes |
activation |
T10448 |
2711-2714 |
MD |
denotes |
may |
T10449 |
2722-2724 |
IN |
denotes |
on |
T10450 |
2725-2728 |
DT |
denotes |
the |
T10451 |
2738-2745 |
NN |
denotes |
context |
T10452 |
2729-2737 |
NN |
denotes |
sequence |
T10453 |
2745-2746 |
. |
denotes |
. |
T10454 |
2746-3044 |
sentence |
denotes |
This would be reasonable given the flexibility and differential regulation of site selection for initiation of DNA replication during development or in various cell types, as well as the variability in initiation potential of each replication origin on the genome even within the single cell type. |
T10455 |
2747-2751 |
DT |
denotes |
This |
T10456 |
2758-2760 |
VB |
denotes |
be |
T10457 |
2752-2757 |
MD |
denotes |
would |
T10458 |
2761-2771 |
JJ |
denotes |
reasonable |
T10459 |
2772-2777 |
VBN |
denotes |
given |
T10460 |
2778-2781 |
DT |
denotes |
the |
T10461 |
2782-2793 |
NN |
denotes |
flexibility |
T10462 |
2794-2797 |
CC |
denotes |
and |
T10463 |
2798-2810 |
JJ |
denotes |
differential |
T10464 |
2811-2821 |
NN |
denotes |
regulation |
T10465 |
2822-2824 |
IN |
denotes |
of |
T10466 |
2825-2829 |
NN |
denotes |
site |
T10467 |
2830-2839 |
NN |
denotes |
selection |
T10468 |
2840-2843 |
IN |
denotes |
for |
T10469 |
2844-2854 |
NN |
denotes |
initiation |
T10470 |
2855-2857 |
IN |
denotes |
of |
T10471 |
2858-2861 |
NN |
denotes |
DNA |
T10472 |
2862-2873 |
NN |
denotes |
replication |
T10473 |
2874-2880 |
IN |
denotes |
during |
T10474 |
2881-2892 |
NN |
denotes |
development |
T10475 |
2893-2895 |
CC |
denotes |
or |
T10476 |
2896-2898 |
IN |
denotes |
in |
T10477 |
2899-2906 |
JJ |
denotes |
various |
T10478 |
2912-2917 |
NNS |
denotes |
types |
T10479 |
2907-2911 |
NN |
denotes |
cell |
T10480 |
2917-2919 |
, |
denotes |
, |
T10481 |
2919-2921 |
RB |
denotes |
as |
T10482 |
2927-2929 |
IN |
denotes |
as |
T10483 |
2922-2926 |
RB |
denotes |
well |
T10484 |
2930-2933 |
DT |
denotes |
the |
T10485 |
2934-2945 |
NN |
denotes |
variability |
T10486 |
2946-2948 |
IN |
denotes |
in |
T10487 |
2949-2959 |
NN |
denotes |
initiation |
T10488 |
2960-2969 |
NN |
denotes |
potential |
T10489 |
2970-2972 |
IN |
denotes |
of |
T10490 |
2973-2977 |
DT |
denotes |
each |
T10491 |
2990-2996 |
NN |
denotes |
origin |
T10492 |
2978-2989 |
NN |
denotes |
replication |
T10493 |
2997-2999 |
IN |
denotes |
on |
T10494 |
3000-3003 |
DT |
denotes |
the |
T10495 |
3004-3010 |
NN |
denotes |
genome |
T10496 |
3011-3015 |
RB |
denotes |
even |
T10497 |
3016-3022 |
IN |
denotes |
within |
T10498 |
3023-3026 |
DT |
denotes |
the |
T10499 |
3039-3043 |
NN |
denotes |
type |
T10500 |
3027-3033 |
JJ |
denotes |
single |
T10501 |
3034-3038 |
NN |
denotes |
cell |
T10502 |
3043-3044 |
. |
denotes |
. |
R6455 |
T9856 |
T9857 |
nmod |
Substrate,requirement |
R6456 |
T9858 |
T9856 |
cc |
and,Substrate |
R6457 |
T9859 |
T9856 |
conj |
sequence,Substrate |
R6458 |
T9860 |
T9857 |
prep |
for,requirement |
R6459 |
T9861 |
T9862 |
nmod |
Mcm4,activation |
R6460 |
T9862 |
T9860 |
pobj |
activation,for |
R6461 |
T9863 |
T9861 |
punct |
/,Mcm4 |
R6462 |
T9864 |
T9861 |
nummod |
6,Mcm4 |
R6463 |
T9865 |
T9861 |
punct |
/,Mcm4 |
R6464 |
T9866 |
T9861 |
nummod |
7,Mcm4 |
R6465 |
T9867 |
T9862 |
compound |
helicase,activation |
R6466 |
T9869 |
T9870 |
compound |
DNA,binding |
R6467 |
T9870 |
T9871 |
compound |
binding,assays |
R6468 |
T9871 |
T9872 |
nsubj |
assays,indicate |
R6469 |
T9873 |
T9874 |
mark |
that,binds |
R6470 |
T9874 |
T9872 |
ccomp |
binds,indicate |
R6471 |
T9875 |
T9874 |
nsubj |
Mcm4,binds |
R6472 |
T9876 |
T9875 |
punct |
/,Mcm4 |
R6473 |
T9877 |
T9875 |
nummod |
6,Mcm4 |
R6474 |
T9878 |
T9875 |
punct |
/,Mcm4 |
R6475 |
T9879 |
T9875 |
nummod |
7,Mcm4 |
R6476 |
T9880 |
T9874 |
prep |
to,binds |
R6477 |
T9881 |
T9882 |
det |
those,substrates |
R6478 |
T9882 |
T9880 |
pobj |
substrates,to |
R6479 |
T9883 |
T9882 |
acl |
containing,substrates |
R6480 |
T9884 |
T9885 |
amod |
single,stranded |
R6481 |
T9885 |
T9887 |
amod |
stranded,regions |
R6482 |
T9886 |
T9885 |
punct |
-,stranded |
R6483 |
T9887 |
T9883 |
dobj |
regions,containing |
R6484 |
T9888 |
T9887 |
compound |
DNA,regions |
R6485 |
T9889 |
T9874 |
advmod |
regardless,binds |
R6486 |
T9890 |
T9889 |
prep |
of,regardless |
R6487 |
T9891 |
T9892 |
det |
the,presence |
R6488 |
T9892 |
T9890 |
pobj |
presence,of |
R6489 |
T9893 |
T9892 |
cc |
or,presence |
R6490 |
T9894 |
T9892 |
conj |
absence,presence |
R6491 |
T9895 |
T9892 |
prep |
of,presence |
R6492 |
T9896 |
T9897 |
amod |
single,stranded |
R6493 |
T9897 |
T9899 |
amod |
stranded,end |
R6494 |
T9898 |
T9897 |
punct |
-,stranded |
R6495 |
T9899 |
T9895 |
pobj |
end,of |
R6496 |
T9900 |
T9899 |
nummod |
3,end |
R6497 |
T9901 |
T9900 |
punct |
′,3 |
R6498 |
T9902 |
T9900 |
cc |
or,3 |
R6499 |
T9903 |
T9900 |
conj |
5,3 |
R6500 |
T9904 |
T9903 |
punct |
′,5 |
R6501 |
T9905 |
T9872 |
punct |
.,indicate |
R6502 |
T9907 |
T9908 |
nsubj |
Unwinding,depends |
R6503 |
T9909 |
T9907 |
prep |
of,Unwinding |
R6504 |
T9910 |
T9911 |
det |
the,DNA |
R6505 |
T9911 |
T9909 |
pobj |
DNA,of |
R6506 |
T9912 |
T9911 |
compound |
duplex,DNA |
R6507 |
T9913 |
T9908 |
prep |
on,depends |
R6508 |
T9914 |
T9913 |
pobj |
translocation,on |
R6509 |
T9915 |
T9914 |
prep |
of,translocation |
R6510 |
T9916 |
T9917 |
amod |
single,stranded |
R6511 |
T9917 |
T9919 |
amod |
stranded,DNA |
R6512 |
T9918 |
T9917 |
punct |
-,stranded |
R6513 |
T9919 |
T9915 |
pobj |
DNA,of |
R6514 |
T9920 |
T9914 |
prep |
from,translocation |
R6515 |
T9921 |
T9920 |
pobj |
3,from |
R6516 |
T9922 |
T9921 |
punct |
′,3 |
R6517 |
T9923 |
T9920 |
prep |
to,from |
R6518 |
T9924 |
T9923 |
pobj |
5,to |
R6519 |
T9925 |
T9924 |
punct |
′,5 |
R6520 |
T9926 |
T9920 |
pobj |
direction,from |
R6521 |
T9927 |
T9908 |
punct |
.,depends |
R6522 |
T9929 |
T9930 |
nsubjpass |
This,shown |
R6523 |
T9931 |
T9930 |
auxpass |
is,shown |
R6524 |
T9932 |
T9933 |
advmod |
most,clearly |
R6525 |
T9933 |
T9930 |
advmod |
clearly,shown |
R6526 |
T9934 |
T9930 |
prep |
by,shown |
R6527 |
T9935 |
T9936 |
poss |
its,action |
R6528 |
T9936 |
T9934 |
pobj |
action,by |
R6529 |
T9937 |
T9936 |
compound |
helicase,action |
R6530 |
T9938 |
T9936 |
prep |
on,action |
R6531 |
T9939 |
T9940 |
nmod |
A,fork |
R6532 |
T9940 |
T9942 |
nmod |
fork,extension |
R6533 |
T9941 |
T9940 |
punct |
-,fork |
R6534 |
T9942 |
T9938 |
pobj |
extension,on |
R6535 |
T9943 |
T9940 |
punct |
[,fork |
R6536 |
T9944 |
T9940 |
appos |
5,fork |
R6537 |
T9945 |
T9944 |
punct |
′,5 |
R6538 |
T9946 |
T9944 |
punct |
],5 |
R6539 |
T9947 |
T9944 |
cc |
and,5 |
R6540 |
T9948 |
T9944 |
conj |
3,5 |
R6541 |
T9949 |
T9948 |
punct |
′,3 |
R6542 |
T9950 |
T9942 |
punct |
-,extension |
R6543 |
T9951 |
T9938 |
cc |
but,on |
R6544 |
T9952 |
T9951 |
neg |
not,but |
R6545 |
T9953 |
T9938 |
conj |
on,on |
R6546 |
T9954 |
T9955 |
nmod |
A,fork |
R6547 |
T9955 |
T9957 |
nmod |
fork,extension |
R6548 |
T9956 |
T9955 |
punct |
-,fork |
R6549 |
T9957 |
T9953 |
pobj |
extension,on |
R6550 |
T9958 |
T9955 |
punct |
[,fork |
R6551 |
T9959 |
T9955 |
nummod |
3,fork |
R6552 |
T9960 |
T9955 |
punct |
′,fork |
R6553 |
T9961 |
T9955 |
punct |
],fork |
R6554 |
T9962 |
T9955 |
punct |
", ",fork |
R6555 |
T9963 |
T9964 |
compound |
A,fork |
R6556 |
T9964 |
T9955 |
conj |
fork,fork |
R6557 |
T9965 |
T9964 |
punct |
-,fork |
R6558 |
T9966 |
T9964 |
punct |
[,fork |
R6559 |
T9967 |
T9964 |
appos |
3,fork |
R6560 |
T9968 |
T9967 |
punct |
′,3 |
R6561 |
T9969 |
T9967 |
punct |
",",3 |
R6562 |
T9970 |
T9967 |
appos |
5,3 |
R6563 |
T9971 |
T9970 |
punct |
′,5 |
R6564 |
T9972 |
T9964 |
punct |
],fork |
R6565 |
T9973 |
T9964 |
cc |
nor,fork |
R6566 |
T9974 |
T9964 |
conj |
5,fork |
R6567 |
T9975 |
T9974 |
punct |
′,5 |
R6568 |
T9976 |
T9957 |
punct |
-,extension |
R6569 |
T9977 |
T9930 |
punct |
.,shown |
R6570 |
T9979 |
T9980 |
advmod |
However,require |
R6571 |
T9981 |
T9980 |
punct |
", ",require |
R6572 |
T9982 |
T9980 |
nsubj |
it,require |
R6573 |
T9983 |
T9980 |
aux |
does,require |
R6574 |
T9984 |
T9980 |
neg |
not,require |
R6575 |
T9985 |
T9980 |
advmod |
necessarily,require |
R6576 |
T9986 |
T9987 |
nummod |
3,end |
R6577 |
T9987 |
T9980 |
dobj |
end,require |
R6578 |
T9988 |
T9986 |
punct |
′,3 |
R6579 |
T9989 |
T9987 |
prep |
of,end |
R6580 |
T9990 |
T9991 |
amod |
single,stranded |
R6581 |
T9991 |
T9993 |
amod |
stranded,DNA |
R6582 |
T9992 |
T9991 |
punct |
-,stranded |
R6583 |
T9993 |
T9989 |
pobj |
DNA,of |
R6584 |
T9994 |
T9980 |
punct |
", ",require |
R6585 |
T9995 |
T9996 |
mark |
since,displace |
R6586 |
T9996 |
T9980 |
advcl |
displace,require |
R6587 |
T9997 |
T9996 |
nsubj |
Mcm4,displace |
R6588 |
T9998 |
T9997 |
punct |
/,Mcm4 |
R6589 |
T9999 |
T9997 |
nummod |
6,Mcm4 |
R6590 |
T10000 |
T9997 |
punct |
/,Mcm4 |
R6591 |
T10001 |
T9997 |
nummod |
7,Mcm4 |
R6592 |
T10002 |
T9996 |
aux |
can,displace |
R6593 |
T10003 |
T10004 |
amod |
annealing,oligonucleotide |
R6594 |
T10004 |
T9996 |
dobj |
oligonucleotide,displace |
R6595 |
T10005 |
T9996 |
prep |
on,displace |
R6596 |
T10006 |
T10007 |
det |
a,DNA |
R6597 |
T10007 |
T10005 |
pobj |
DNA,on |
R6598 |
T10008 |
T10007 |
amod |
circular,DNA |
R6599 |
T10009 |
T10010 |
amod |
single,stranded |
R6600 |
T10010 |
T10007 |
amod |
stranded,DNA |
R6601 |
T10011 |
T10010 |
punct |
-,stranded |
R6602 |
T10012 |
T9980 |
punct |
.,require |
R6603 |
T10014 |
T10015 |
det |
The,ability |
R6604 |
T10015 |
T10016 |
nsubjpass |
ability,shared |
R6605 |
T10017 |
T10015 |
prep |
of,ability |
R6606 |
T10018 |
T10019 |
det |
the,Mcm4 |
R6607 |
T10019 |
T10017 |
pobj |
Mcm4,of |
R6608 |
T10020 |
T10019 |
compound |
mouse,Mcm4 |
R6609 |
T10021 |
T10019 |
punct |
/,Mcm4 |
R6610 |
T10022 |
T10019 |
nummod |
6,Mcm4 |
R6611 |
T10023 |
T10019 |
punct |
/,Mcm4 |
R6612 |
T10024 |
T10019 |
nummod |
7,Mcm4 |
R6613 |
T10025 |
T10026 |
aux |
to,unwind |
R6614 |
T10026 |
T10015 |
acl |
unwind,ability |
R6615 |
T10027 |
T10028 |
nummod |
3,extension |
R6616 |
T10028 |
T10026 |
dobj |
extension,unwind |
R6617 |
T10029 |
T10027 |
punct |
′,3 |
R6618 |
T10030 |
T10028 |
punct |
-,extension |
R6619 |
T10031 |
T10016 |
auxpass |
is,shared |
R6620 |
T10032 |
T10016 |
prep |
by,shared |
R6621 |
T10033 |
T10034 |
det |
the,helicase |
R6622 |
T10034 |
T10032 |
pobj |
helicase,by |
R6623 |
T10035 |
T10034 |
amod |
archaeal,helicase |
R6624 |
T10036 |
T10034 |
compound |
Mcm,helicase |
R6625 |
T10037 |
T10032 |
cc |
but,by |
R6626 |
T10038 |
T10037 |
neg |
not,but |
R6627 |
T10039 |
T10032 |
conj |
by,by |
R6628 |
T10040 |
T10039 |
pobj |
Mcm4,by |
R6629 |
T10041 |
T10040 |
punct |
/,Mcm4 |
R6630 |
T10042 |
T10040 |
nummod |
6,Mcm4 |
R6631 |
T10043 |
T10040 |
punct |
/,Mcm4 |
R6632 |
T10044 |
T10040 |
nummod |
7,Mcm4 |
R6633 |
T10045 |
T10040 |
prep |
from,Mcm4 |
R6634 |
T10046 |
T10045 |
pobj |
S.pombe,from |
R6635 |
T10047 |
T10046 |
cc |
and,S.pombe |
R6636 |
T10048 |
T10046 |
conj |
S.cerevisiae,S.pombe |
R6637 |
T10049 |
T10050 |
punct |
(,27 |
R6638 |
T10050 |
T10016 |
parataxis |
27,shared |
R6639 |
T10051 |
T10050 |
nummod |
14,27 |
R6640 |
T10052 |
T10050 |
punct |
",",27 |
R6641 |
T10053 |
T10050 |
nummod |
26,27 |
R6642 |
T10054 |
T10050 |
punct |
",",27 |
R6643 |
T10055 |
T10050 |
punct |
),27 |
R6644 |
T10056 |
T10016 |
punct |
.,shared |
R6645 |
T10058 |
T10059 |
det |
The,Mcm |
R6646 |
T10059 |
T10061 |
nsubj |
Mcm,unwind |
R6647 |
T10060 |
T10059 |
amod |
archaeal,Mcm |
R6648 |
T10062 |
T10061 |
aux |
can,unwind |
R6649 |
T10063 |
T10064 |
compound |
A,fork |
R6650 |
T10064 |
T10061 |
dobj |
fork,unwind |
R6651 |
T10065 |
T10064 |
punct |
-,fork |
R6652 |
T10066 |
T10064 |
punct |
[,fork |
R6653 |
T10067 |
T10064 |
nummod |
3,fork |
R6654 |
T10068 |
T10064 |
punct |
′,fork |
R6655 |
T10069 |
T10061 |
punct |
],unwind |
R6656 |
T10070 |
T10061 |
cc |
but,unwind |
R6657 |
T10071 |
T10072 |
amod |
eukaryotic,Mcm4 |
R6658 |
T10072 |
T10073 |
nsubj |
Mcm4,can |
R6659 |
T10073 |
T10061 |
conj |
can,unwind |
R6660 |
T10074 |
T10072 |
punct |
/,Mcm4 |
R6661 |
T10075 |
T10072 |
nummod |
6,Mcm4 |
R6662 |
T10076 |
T10072 |
punct |
/,Mcm4 |
R6663 |
T10077 |
T10072 |
nummod |
7,Mcm4 |
R6664 |
T10078 |
T10073 |
neg |
not,can |
R6665 |
T10079 |
T10061 |
punct |
", ",unwind |
R6666 |
T10080 |
T10081 |
mark |
since,binds |
R6667 |
T10081 |
T10061 |
advcl |
binds,unwind |
R6668 |
T10082 |
T10083 |
det |
the,former |
R6669 |
T10083 |
T10081 |
nsubj |
former,binds |
R6670 |
T10084 |
T10081 |
prep |
to,binds |
R6671 |
T10085 |
T10086 |
amod |
double,stranded |
R6672 |
T10086 |
T10088 |
amod |
stranded,DNA |
R6673 |
T10087 |
T10086 |
punct |
-,stranded |
R6674 |
T10088 |
T10084 |
pobj |
DNA,to |
R6675 |
T10089 |
T10081 |
cc |
but,binds |
R6676 |
T10090 |
T10091 |
det |
the,latter |
R6677 |
T10091 |
T10092 |
nsubj |
latter,27 |
R6678 |
T10092 |
T10081 |
conj |
27,binds |
R6679 |
T10093 |
T10092 |
aux |
does,27 |
R6680 |
T10094 |
T10092 |
neg |
not,27 |
R6681 |
T10095 |
T10092 |
punct |
(,27 |
R6682 |
T10096 |
T10092 |
nummod |
5,27 |
R6683 |
T10097 |
T10092 |
punct |
",",27 |
R6684 |
T10098 |
T10092 |
punct |
),27 |
R6685 |
T10099 |
T10061 |
punct |
.,unwind |
R6686 |
T10101 |
T10102 |
mark |
While,translocate |
R6687 |
T10102 |
T10107 |
advcl |
translocate,observed |
R6688 |
T10103 |
T10104 |
compound |
yeast,Mcm |
R6689 |
T10104 |
T10105 |
compound |
Mcm,helicases |
R6690 |
T10105 |
T10102 |
nsubj |
helicases,translocate |
R6691 |
T10106 |
T10102 |
aux |
can,translocate |
R6692 |
T10108 |
T10102 |
prep |
on,translocate |
R6693 |
T10109 |
T10110 |
compound |
duplex,DNA |
R6694 |
T10110 |
T10108 |
pobj |
DNA,on |
R6695 |
T10111 |
T10107 |
punct |
", ",observed |
R6696 |
T10112 |
T10113 |
amod |
such,activity |
R6697 |
T10113 |
T10107 |
nsubjpass |
activity,observed |
R6698 |
T10114 |
T10107 |
auxpass |
was,observed |
R6699 |
T10115 |
T10107 |
neg |
not,observed |
R6700 |
T10116 |
T10107 |
prep |
with,observed |
R6701 |
T10117 |
T10118 |
amod |
mammalian,Mcm4 |
R6702 |
T10118 |
T10116 |
pobj |
Mcm4,with |
R6703 |
T10119 |
T10118 |
punct |
/,Mcm4 |
R6704 |
T10120 |
T10118 |
nummod |
6,Mcm4 |
R6705 |
T10121 |
T10118 |
punct |
/,Mcm4 |
R6706 |
T10122 |
T10118 |
nummod |
7,Mcm4 |
R6707 |
T10123 |
T10124 |
punct |
(,shown |
R6708 |
T10124 |
T10107 |
parataxis |
shown,observed |
R6709 |
T10125 |
T10124 |
nsubj |
data,shown |
R6710 |
T10126 |
T10124 |
neg |
not,shown |
R6711 |
T10127 |
T10124 |
punct |
),shown |
R6712 |
T10128 |
T10107 |
punct |
.,observed |
R6713 |
T10130 |
T10131 |
nsubj |
Occurrence,lead |
R6714 |
T10132 |
T10130 |
prep |
of,Occurrence |
R6715 |
T10133 |
T10134 |
npadvmod |
AT,rich |
R6716 |
T10134 |
T10136 |
amod |
rich,sequences |
R6717 |
T10135 |
T10134 |
punct |
-,rich |
R6718 |
T10136 |
T10132 |
pobj |
sequences,of |
R6719 |
T10137 |
T10130 |
punct |
", ",Occurrence |
R6720 |
T10138 |
T10130 |
prep |
with,Occurrence |
R6721 |
T10139 |
T10140 |
amod |
asymmetric,distribution |
R6722 |
T10140 |
T10138 |
pobj |
distribution,with |
R6723 |
T10141 |
T10140 |
prep |
of,distribution |
R6724 |
T10142 |
T10141 |
pobj |
adenine,of |
R6725 |
T10143 |
T10142 |
cc |
and,adenine |
R6726 |
T10144 |
T10142 |
conj |
thymine,adenine |
R6727 |
T10145 |
T10140 |
punct |
", ",distribution |
R6728 |
T10146 |
T10140 |
prep |
near,distribution |
R6729 |
T10147 |
T10148 |
det |
the,origins |
R6730 |
T10148 |
T10146 |
pobj |
origins,near |
R6731 |
T10149 |
T10148 |
compound |
replication,origins |
R6732 |
T10150 |
T10131 |
punct |
", ",lead |
R6733 |
T10151 |
T10131 |
dobj |
us,lead |
R6734 |
T10152 |
T10153 |
aux |
to,propose |
R6735 |
T10153 |
T10131 |
xcomp |
propose,lead |
R6736 |
T10154 |
T10155 |
mark |
that,play |
R6737 |
T10155 |
T10153 |
ccomp |
play,propose |
R6738 |
T10156 |
T10155 |
nsubj |
Mcm,play |
R6739 |
T10157 |
T10155 |
aux |
may,play |
R6740 |
T10158 |
T10159 |
det |
a,role |
R6741 |
T10159 |
T10155 |
dobj |
role,play |
R6742 |
T10160 |
T10155 |
prep |
in,play |
R6743 |
T10161 |
T10160 |
pobj |
selection,in |
R6744 |
T10162 |
T10161 |
prep |
of,selection |
R6745 |
T10163 |
T10164 |
compound |
initiation,sites |
R6746 |
T10164 |
T10162 |
pobj |
sites,of |
R6747 |
T10165 |
T10164 |
prep |
of,sites |
R6748 |
T10166 |
T10167 |
amod |
mammalian,DNA |
R6749 |
T10167 |
T10168 |
compound |
DNA,replication |
R6750 |
T10168 |
T10165 |
pobj |
replication,of |
R6751 |
T10169 |
T10131 |
punct |
", ",lead |
R6752 |
T10170 |
T10131 |
cc |
and,lead |
R6753 |
T10171 |
T10131 |
conj |
prompted,lead |
R6754 |
T10172 |
T10171 |
dobj |
us,prompted |
R6755 |
T10173 |
T10174 |
aux |
to,examine |
R6756 |
T10174 |
T10171 |
xcomp |
examine,prompted |
R6757 |
T10175 |
T10176 |
det |
the,ability |
R6758 |
T10176 |
T10174 |
dobj |
ability,examine |
R6759 |
T10177 |
T10176 |
prep |
of,ability |
R6760 |
T10178 |
T10177 |
pobj |
sequences,of |
R6761 |
T10179 |
T10178 |
prep |
from,sequences |
R6762 |
T10180 |
T10181 |
amod |
human,origins |
R6763 |
T10181 |
T10179 |
pobj |
origins,from |
R6764 |
T10182 |
T10181 |
compound |
replication,origins |
R6765 |
T10183 |
T10184 |
aux |
to,activate |
R6766 |
T10184 |
T10176 |
acl |
activate,ability |
R6767 |
T10185 |
T10186 |
nmod |
Mcm4,helicase |
R6768 |
T10186 |
T10184 |
dobj |
helicase,activate |
R6769 |
T10187 |
T10185 |
punct |
/,Mcm4 |
R6770 |
T10188 |
T10185 |
nummod |
6,Mcm4 |
R6771 |
T10189 |
T10185 |
punct |
/,Mcm4 |
R6772 |
T10190 |
T10185 |
nummod |
7,Mcm4 |
R6773 |
T10191 |
T10131 |
punct |
.,lead |
R6774 |
T10193 |
T10194 |
preconj |
Both,B2 |
R6775 |
T10194 |
T10197 |
nmod |
B2,origins |
R6776 |
T10195 |
T10194 |
nmod |
lamin,B2 |
R6777 |
T10196 |
T10194 |
punct |
-,B2 |
R6778 |
T10197 |
T10202 |
nsubj |
origins,served |
R6779 |
T10198 |
T10194 |
cc |
and,B2 |
R6780 |
T10199 |
T10200 |
compound |
c,myc |
R6781 |
T10200 |
T10194 |
conj |
myc,B2 |
R6782 |
T10201 |
T10200 |
punct |
-,myc |
R6783 |
T10203 |
T10202 |
prep |
as,served |
R6784 |
T10204 |
T10205 |
amod |
efficient,activator |
R6785 |
T10205 |
T10203 |
pobj |
activator,as |
R6786 |
T10206 |
T10205 |
prep |
for,activator |
R6787 |
T10207 |
T10208 |
compound |
Mcm,helicase |
R6788 |
T10208 |
T10206 |
pobj |
helicase,for |
R6789 |
T10209 |
T10210 |
advmod |
in,vitro |
R6790 |
T10210 |
T10202 |
advmod |
vitro,served |
R6791 |
T10211 |
T10202 |
punct |
.,served |
R6792 |
T10213 |
T10214 |
advcl |
Consistent,reported |
R6793 |
T10215 |
T10213 |
prep |
with,Consistent |
R6794 |
T10216 |
T10215 |
pobj |
it,with |
R6795 |
T10217 |
T10214 |
punct |
", ",reported |
R6796 |
T10218 |
T10219 |
npadvmod |
site,specific |
R6797 |
T10219 |
T10221 |
amod |
specific,loading |
R6798 |
T10220 |
T10219 |
punct |
-,specific |
R6799 |
T10221 |
T10214 |
nsubjpass |
loading,reported |
R6800 |
T10222 |
T10221 |
prep |
of,loading |
R6801 |
T10223 |
T10222 |
pobj |
Mcm,of |
R6802 |
T10224 |
T10221 |
prep |
in,loading |
R6803 |
T10225 |
T10226 |
det |
the,zone |
R6804 |
T10226 |
T10224 |
pobj |
zone,in |
R6805 |
T10227 |
T10228 |
compound |
DNA,initiation |
R6806 |
T10228 |
T10226 |
compound |
initiation,zone |
R6807 |
T10229 |
T10228 |
compound |
replication,initiation |
R6808 |
T10230 |
T10226 |
prep |
of,zone |
R6809 |
T10231 |
T10232 |
det |
the,myc |
R6810 |
T10232 |
T10230 |
pobj |
myc,of |
R6811 |
T10233 |
T10232 |
compound |
c,myc |
R6812 |
T10234 |
T10232 |
punct |
-,myc |
R6813 |
T10235 |
T10214 |
auxpass |
was,reported |
R6814 |
T10236 |
T10214 |
advmod |
recently,reported |
R6815 |
T10237 |
T10238 |
punct |
(,33 |
R6816 |
T10238 |
T10214 |
parataxis |
33,reported |
R6817 |
T10239 |
T10238 |
punct |
),33 |
R6818 |
T10240 |
T10214 |
punct |
.,reported |
R6819 |
T10242 |
T10243 |
nsubj |
We,examined |
R6820 |
T10244 |
T10243 |
aux |
have,examined |
R6821 |
T10245 |
T10243 |
prep |
in,examined |
R6822 |
T10246 |
T10245 |
pobj |
detail,in |
R6823 |
T10247 |
T10248 |
det |
the,effect |
R6824 |
T10248 |
T10243 |
dobj |
effect,examined |
R6825 |
T10249 |
T10248 |
prep |
of,effect |
R6826 |
T10250 |
T10251 |
compound |
sequence,context |
R6827 |
T10251 |
T10249 |
pobj |
context,of |
R6828 |
T10252 |
T10251 |
prep |
of,context |
R6829 |
T10253 |
T10254 |
det |
the,DNA |
R6830 |
T10254 |
T10252 |
pobj |
DNA,of |
R6831 |
T10255 |
T10256 |
amod |
single,stranded |
R6832 |
T10256 |
T10254 |
amod |
stranded,DNA |
R6833 |
T10257 |
T10256 |
punct |
-,stranded |
R6834 |
T10258 |
T10248 |
prep |
on,effect |
R6835 |
T10259 |
T10260 |
det |
the,activity |
R6836 |
T10260 |
T10258 |
pobj |
activity,on |
R6837 |
T10261 |
T10260 |
compound |
helicase,activity |
R6838 |
T10262 |
T10260 |
prep |
of,activity |
R6839 |
T10263 |
T10262 |
pobj |
Mcm,of |
R6840 |
T10264 |
T10243 |
punct |
.,examined |
R6841 |
T10266 |
T10267 |
det |
The,results |
R6842 |
T10267 |
T10268 |
nsubj |
results,indicate |
R6843 |
T10269 |
T10270 |
mark |
that,is |
R6844 |
T10270 |
T10268 |
ccomp |
is,indicate |
R6845 |
T10271 |
T10272 |
compound |
thymine,content |
R6846 |
T10272 |
T10270 |
nsubj |
content,is |
R6847 |
T10273 |
T10272 |
prep |
of,content |
R6848 |
T10274 |
T10275 |
nummod |
50,% |
R6849 |
T10275 |
T10273 |
pobj |
%,of |
R6850 |
T10276 |
T10270 |
acomp |
sufficient,is |
R6851 |
T10277 |
T10276 |
prep |
for,sufficient |
R6852 |
T10278 |
T10279 |
det |
the,activity |
R6853 |
T10279 |
T10277 |
pobj |
activity,for |
R6854 |
T10280 |
T10279 |
amod |
maximum,activity |
R6855 |
T10281 |
T10279 |
compound |
helicase,activity |
R6856 |
T10282 |
T10268 |
punct |
.,indicate |
R6857 |
T10284 |
T10285 |
det |
The,efficiency |
R6858 |
T10285 |
T10286 |
nsubj |
efficiency,decreased |
R6859 |
T10287 |
T10285 |
prep |
of,efficiency |
R6860 |
T10288 |
T10287 |
pobj |
displacement,of |
R6861 |
T10289 |
T10290 |
mark |
as,dropped |
R6862 |
T10290 |
T10286 |
advcl |
dropped,decreased |
R6863 |
T10291 |
T10292 |
det |
the,content |
R6864 |
T10292 |
T10290 |
nsubj |
content,dropped |
R6865 |
T10293 |
T10292 |
compound |
thymine,content |
R6866 |
T10294 |
T10292 |
prep |
of,content |
R6867 |
T10295 |
T10296 |
det |
the,tail |
R6868 |
T10296 |
T10294 |
pobj |
tail,of |
R6869 |
T10297 |
T10296 |
nummod |
3,tail |
R6870 |
T10298 |
T10297 |
punct |
′,3 |
R6871 |
T10299 |
T10296 |
punct |
-,tail |
R6872 |
T10300 |
T10290 |
prep |
to,dropped |
R6873 |
T10301 |
T10302 |
nummod |
33,% |
R6874 |
T10302 |
T10300 |
pobj |
%,to |
R6875 |
T10303 |
T10304 |
punct |
(,Figure |
R6876 |
T10304 |
T10290 |
parataxis |
Figure,dropped |
R6877 |
T10305 |
T10304 |
nummod |
6,Figure |
R6878 |
T10306 |
T10304 |
punct |
),Figure |
R6879 |
T10307 |
T10286 |
punct |
.,decreased |
R6880 |
T10309 |
T10310 |
det |
The,stretches |
R6881 |
T10310 |
T10311 |
nsubjpass |
stretches,required |
R6882 |
T10312 |
T10310 |
prep |
of,stretches |
R6883 |
T10313 |
T10314 |
compound |
thymine,residues |
R6884 |
T10314 |
T10312 |
pobj |
residues,of |
R6885 |
T10315 |
T10311 |
aux |
may,required |
R6886 |
T10316 |
T10311 |
neg |
not,required |
R6887 |
T10317 |
T10311 |
auxpass |
be,required |
R6888 |
T10318 |
T10311 |
advmod |
necessarily,required |
R6889 |
T10319 |
T10311 |
punct |
", ",required |
R6890 |
T10320 |
T10321 |
mark |
since,served |
R6891 |
T10321 |
T10311 |
advcl |
served,required |
R6892 |
T10322 |
T10321 |
nsubj |
repeats,served |
R6893 |
T10323 |
T10322 |
prep |
of,repeats |
R6894 |
T10324 |
T10325 |
compound |
TC,dinucleotides |
R6895 |
T10325 |
T10323 |
pobj |
dinucleotides,of |
R6896 |
T10326 |
T10321 |
prep |
as,served |
R6897 |
T10327 |
T10328 |
det |
a,activator |
R6898 |
T10328 |
T10326 |
pobj |
activator,as |
R6899 |
T10329 |
T10328 |
amod |
potent,activator |
R6900 |
T10330 |
T10328 |
prep |
for,activator |
R6901 |
T10331 |
T10330 |
pobj |
Mcm4,for |
R6902 |
T10332 |
T10331 |
punct |
/,Mcm4 |
R6903 |
T10333 |
T10331 |
nummod |
6,Mcm4 |
R6904 |
T10334 |
T10331 |
punct |
/,Mcm4 |
R6905 |
T10335 |
T10331 |
nummod |
7,Mcm4 |
R6906 |
T10336 |
T10311 |
punct |
.,required |
R6907 |
T10338 |
T10339 |
nsubj |
We,noticed |
R6908 |
T10340 |
T10339 |
advmod |
also,noticed |
R6909 |
T10341 |
T10342 |
mark |
that,is |
R6910 |
T10342 |
T10339 |
ccomp |
is,noticed |
R6911 |
T10343 |
T10344 |
det |
the,presence |
R6912 |
T10344 |
T10342 |
nsubj |
presence,is |
R6913 |
T10345 |
T10344 |
prep |
of,presence |
R6914 |
T10346 |
T10347 |
det |
a,structure |
R6915 |
T10347 |
T10345 |
pobj |
structure,of |
R6916 |
T10348 |
T10347 |
amod |
secondary,structure |
R6917 |
T10349 |
T10347 |
prep |
within,structure |
R6918 |
T10350 |
T10351 |
det |
the,DNA |
R6919 |
T10351 |
T10349 |
pobj |
DNA,within |
R6920 |
T10352 |
T10353 |
amod |
single,stranded |
R6921 |
T10353 |
T10351 |
amod |
stranded,DNA |
R6922 |
T10354 |
T10353 |
punct |
-,stranded |
R6923 |
T10355 |
T10342 |
acomp |
inhibitory,is |
R6924 |
T10356 |
T10355 |
prep |
for,inhibitory |
R6925 |
T10357 |
T10358 |
compound |
helicase,action |
R6926 |
T10358 |
T10356 |
pobj |
action,for |
R6927 |
T10359 |
T10339 |
punct |
.,noticed |
R6928 |
T10361 |
T10362 |
compound |
Nuclease,footprinting |
R6929 |
T10362 |
T10363 |
compound |
footprinting,assays |
R6930 |
T10363 |
T10364 |
nsubj |
assays,indicated |
R6931 |
T10365 |
T10366 |
mark |
that,interfered |
R6932 |
T10366 |
T10364 |
ccomp |
interfered,indicated |
R6933 |
T10367 |
T10366 |
nsubjpass |
binding,interfered |
R6934 |
T10368 |
T10366 |
auxpass |
was,interfered |
R6935 |
T10369 |
T10366 |
agent |
by,interfered |
R6936 |
T10370 |
T10371 |
det |
the,structure |
R6937 |
T10371 |
T10369 |
pobj |
structure,by |
R6938 |
T10372 |
T10371 |
amod |
secondary,structure |
R6939 |
T10373 |
T10374 |
punct |
(,shown |
R6940 |
T10374 |
T10366 |
parataxis |
shown,interfered |
R6941 |
T10375 |
T10374 |
nsubj |
data,shown |
R6942 |
T10376 |
T10374 |
neg |
not,shown |
R6943 |
T10377 |
T10374 |
punct |
),shown |
R6944 |
T10378 |
T10364 |
punct |
.,indicated |
R6945 |
T10380 |
T10381 |
advmod |
Thus,concluded |
R6946 |
T10382 |
T10381 |
punct |
", ",concluded |
R6947 |
T10383 |
T10381 |
nsubj |
we,concluded |
R6948 |
T10384 |
T10381 |
aux |
have,concluded |
R6949 |
T10385 |
T10386 |
mark |
that,activated |
R6950 |
T10386 |
T10381 |
ccomp |
activated,concluded |
R6951 |
T10387 |
T10388 |
nmod |
Mcm4,helicase |
R6952 |
T10388 |
T10386 |
nsubjpass |
helicase,activated |
R6953 |
T10389 |
T10387 |
punct |
/,Mcm4 |
R6954 |
T10390 |
T10387 |
nummod |
6,Mcm4 |
R6955 |
T10391 |
T10387 |
punct |
/,Mcm4 |
R6956 |
T10392 |
T10387 |
nummod |
7,Mcm4 |
R6957 |
T10393 |
T10386 |
auxpass |
is,activated |
R6958 |
T10394 |
T10395 |
advmod |
most,efficiently |
R6959 |
T10395 |
T10386 |
advmod |
efficiently,activated |
R6960 |
T10396 |
T10386 |
agent |
by,activated |
R6961 |
T10397 |
T10398 |
amod |
non-structured,DNA |
R6962 |
T10398 |
T10396 |
pobj |
DNA,by |
R6963 |
T10399 |
T10400 |
amod |
single,stranded |
R6964 |
T10400 |
T10398 |
amod |
stranded,DNA |
R6965 |
T10401 |
T10400 |
punct |
-,stranded |
R6966 |
T10402 |
T10398 |
prep |
with,DNA |
R6967 |
T10403 |
T10404 |
compound |
thymine,content |
R6968 |
T10404 |
T10402 |
pobj |
content,with |
R6969 |
T10405 |
T10404 |
prep |
of,content |
R6970 |
T10406 |
T10407 |
nummod |
50,% |
R6971 |
T10407 |
T10405 |
pobj |
%,of |
R6972 |
T10408 |
T10409 |
cc |
or,more |
R6973 |
T10409 |
T10407 |
nummod |
more,% |
R6974 |
T10410 |
T10386 |
punct |
", ",activated |
R6975 |
T10411 |
T10412 |
mark |
although,observed |
R6976 |
T10412 |
T10386 |
advcl |
observed,activated |
R6977 |
T10413 |
T10414 |
amod |
significant,stimulation |
R6978 |
T10414 |
T10412 |
nsubjpass |
stimulation,observed |
R6979 |
T10415 |
T10412 |
auxpass |
is,observed |
R6980 |
T10416 |
T10412 |
advmod |
also,observed |
R6981 |
T10417 |
T10412 |
agent |
by,observed |
R6982 |
T10418 |
T10417 |
pobj |
DNA,by |
R6983 |
T10419 |
T10418 |
prep |
with,DNA |
R6984 |
T10420 |
T10421 |
amod |
less,content |
R6985 |
T10421 |
T10419 |
pobj |
content,with |
R6986 |
T10422 |
T10421 |
compound |
thymine,content |
R6987 |
T10423 |
T10424 |
punct |
(,Figure |
R6988 |
T10424 |
T10418 |
parataxis |
Figure,DNA |
R6989 |
T10425 |
T10424 |
nummod |
7,Figure |
R6990 |
T10426 |
T10424 |
punct |
),Figure |
R6991 |
T10427 |
T10412 |
punct |
", ",observed |
R6992 |
T10428 |
T10412 |
advcl |
suggesting,observed |
R6993 |
T10429 |
T10430 |
mark |
that,is |
R6994 |
T10430 |
T10428 |
advcl |
is,suggesting |
R6995 |
T10431 |
T10432 |
det |
the,specificity |
R6996 |
T10432 |
T10430 |
nsubj |
specificity,is |
R6997 |
T10433 |
T10432 |
compound |
sequence,specificity |
R6998 |
T10434 |
T10432 |
prep |
for,specificity |
R6999 |
T10435 |
T10436 |
compound |
Mcm,helicase |
R7000 |
T10436 |
T10437 |
compound |
helicase,activation |
R7001 |
T10437 |
T10434 |
pobj |
activation,for |
R7002 |
T10438 |
T10439 |
advmod |
rather,relaxed |
R7003 |
T10439 |
T10430 |
acomp |
relaxed,is |
R7004 |
T10440 |
T10430 |
cc |
and,is |
R7005 |
T10441 |
T10442 |
mark |
that,depend |
R7006 |
T10442 |
T10430 |
conj |
depend,is |
R7007 |
T10443 |
T10444 |
det |
the,extent |
R7008 |
T10444 |
T10442 |
nsubj |
extent,depend |
R7009 |
T10445 |
T10444 |
prep |
of,extent |
R7010 |
T10446 |
T10447 |
det |
the,activation |
R7011 |
T10447 |
T10445 |
pobj |
activation,of |
R7012 |
T10448 |
T10442 |
aux |
may,depend |
R7013 |
T10449 |
T10442 |
prep |
on,depend |
R7014 |
T10450 |
T10451 |
det |
the,context |
R7015 |
T10451 |
T10449 |
pobj |
context,on |
R7016 |
T10452 |
T10451 |
compound |
sequence,context |
R7017 |
T10453 |
T10381 |
punct |
.,concluded |
R7018 |
T10455 |
T10456 |
nsubj |
This,be |
R7019 |
T10457 |
T10456 |
aux |
would,be |
R7020 |
T10458 |
T10456 |
acomp |
reasonable,be |
R7021 |
T10459 |
T10456 |
prep |
given,be |
R7022 |
T10460 |
T10461 |
det |
the,flexibility |
R7023 |
T10461 |
T10459 |
pobj |
flexibility,given |
R7024 |
T10462 |
T10461 |
cc |
and,flexibility |
R7025 |
T10463 |
T10464 |
amod |
differential,regulation |
R7026 |
T10464 |
T10461 |
conj |
regulation,flexibility |
R7027 |
T10465 |
T10461 |
prep |
of,flexibility |
R7028 |
T10466 |
T10467 |
compound |
site,selection |
R7029 |
T10467 |
T10465 |
pobj |
selection,of |
R7030 |
T10468 |
T10461 |
prep |
for,flexibility |
R7031 |
T10469 |
T10468 |
pobj |
initiation,for |
R7032 |
T10470 |
T10469 |
prep |
of,initiation |
R7033 |
T10471 |
T10472 |
compound |
DNA,replication |
R7034 |
T10472 |
T10470 |
pobj |
replication,of |
R7035 |
T10473 |
T10469 |
prep |
during,initiation |
R7036 |
T10474 |
T10473 |
pobj |
development,during |
R7037 |
T10475 |
T10468 |
cc |
or,for |
R7038 |
T10476 |
T10468 |
conj |
in,for |
R7039 |
T10477 |
T10478 |
amod |
various,types |
R7040 |
T10478 |
T10476 |
pobj |
types,in |
R7041 |
T10479 |
T10478 |
compound |
cell,types |
R7042 |
T10480 |
T10461 |
punct |
", ",flexibility |
R7043 |
T10481 |
T10482 |
advmod |
as,as |
R7044 |
T10482 |
T10461 |
cc |
as,flexibility |
R7045 |
T10483 |
T10482 |
advmod |
well,as |
R7046 |
T10484 |
T10485 |
det |
the,variability |
R7047 |
T10485 |
T10461 |
conj |
variability,flexibility |
R7048 |
T10486 |
T10485 |
prep |
in,variability |
R7049 |
T10487 |
T10488 |
compound |
initiation,potential |
R7050 |
T10488 |
T10486 |
pobj |
potential,in |
R7051 |
T10489 |
T10488 |
prep |
of,potential |
R7052 |
T10490 |
T10491 |
det |
each,origin |
R7053 |
T10491 |
T10489 |
pobj |
origin,of |
R7054 |
T10492 |
T10491 |
compound |
replication,origin |
R7055 |
T10493 |
T10491 |
prep |
on,origin |
R7056 |
T10494 |
T10495 |
det |
the,genome |
R7057 |
T10495 |
T10493 |
pobj |
genome,on |
R7058 |
T10496 |
T10497 |
advmod |
even,within |
R7059 |
T10497 |
T10485 |
prep |
within,variability |
R7060 |
T10498 |
T10499 |
det |
the,type |
R7061 |
T10499 |
T10497 |
pobj |
type,within |
R7062 |
T10500 |
T10499 |
amod |
single,type |
R7063 |
T10501 |
T10499 |
compound |
cell,type |
R7064 |
T10502 |
T10456 |
punct |
.,be |