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PMC:1140370 / 2949-3281 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T1049 1-6 NN denotes stage
T1053 7-9 IN denotes as
T1054 10-11 DT denotes a
T1055 24-32 NN denotes helicase
T1056 12-23 JJ denotes replicative
T1057 33-34 -LRB- denotes (
T1058 37-39 CD denotes 20
T1059 34-36 CD denotes 19
T1060 36-37 , denotes ,
T1061 39-40 -RRB- denotes )
T1062 40-41 . denotes .
T1063 41-254 sentence denotes Consistent with this notion, the processivity of the Schizosaccharomyces pombe and mouse Mcm4/6/7 complexes is significantly stimulated on forked DNA structures and it can unwind duplex DNA of 400–500 bp (13,14).
T1064 42-52 JJ denotes Consistent
T1065 167-177 VBN denotes stimulated
T1066 53-57 IN denotes with
T1067 58-62 DT denotes this
T1068 63-69 NN denotes notion
T1069 69-71 , denotes ,
T1070 71-74 DT denotes the
T1071 75-87 NN denotes processivity
T1072 88-90 IN denotes of
T1073 91-94 DT denotes the
T1074 140-149 NNS denotes complexes
T1075 95-114 NNP denotes Schizosaccharomyces
T1076 115-120 NNP denotes pombe
T1077 121-124 CC denotes and
T1078 125-130 NN denotes mouse
T1079 131-135 NN denotes Mcm4
T1080 135-136 HYPH denotes /
T1081 136-137 CD denotes 6
T1082 137-138 HYPH denotes /
T1083 138-139 CD denotes 7
T1084 150-152 VBZ denotes is
T1085 153-166 RB denotes significantly
T1086 178-180 IN denotes on
T1087 181-187 VBN denotes forked
T1088 188-191 NN denotes DNA
T1089 192-202 NNS denotes structures
T1090 203-206 CC denotes and
T1091 207-209 PRP denotes it
T1092 214-220 VB denotes unwind
T1093 210-213 MD denotes can
T1094 221-227 NN denotes duplex
T1095 228-231 NN denotes DNA
T1096 232-234 IN denotes of
T1097 235-238 CD denotes 400
T1098 239-242 CD denotes 500
T1099 238-239 SYM denotes –
T1100 243-245 NN denotes bp
T1101 246-247 -LRB- denotes (
T1102 250-252 CD denotes 14
T1103 247-249 CD denotes 13
T1104 249-250 , denotes ,
T1105 252-253 -RRB- denotes )
T1106 253-254 . denotes .
T1108 255-259 NN denotes Mcm4
T1109 264-269 VBZ denotes binds
T1110 259-260 HYPH denotes /
T1111 260-261 CD denotes 6
T1112 261-262 HYPH denotes /
T1113 262-263 CD denotes 7
T1114 270-272 IN denotes to
T1115 273-277 NN denotes fork
T1116 289-299 NNS denotes structures
T1117 278-281 CC denotes and
T1118 282-288 NN denotes bubble
T1119 300-302 IN denotes in
T1120 303-305 DT denotes an
T1121 320-326 NN denotes manner
T1122 306-309 NN denotes ATP
T1123 310-319 JJ denotes dependent
T1124 309-310 HYPH denotes -
T1125 326-328 , denotes ,
T1126 328-331 CC denotes and
R560 T1054 T1055 det a,helicase
R561 T1055 T1053 pobj helicase,as
R562 T1056 T1055 amod replicative,helicase
R563 T1057 T1058 punct (,20
R565 T1059 T1058 nummod 19,20
R566 T1060 T1058 punct ",",20
R567 T1061 T1058 punct ),20
R569 T1064 T1065 advcl Consistent,stimulated
R570 T1066 T1064 prep with,Consistent
R571 T1067 T1068 det this,notion
R572 T1068 T1066 pobj notion,with
R573 T1069 T1065 punct ", ",stimulated
R574 T1070 T1071 det the,processivity
R575 T1071 T1065 nsubjpass processivity,stimulated
R576 T1072 T1071 prep of,processivity
R577 T1073 T1074 det the,complexes
R578 T1074 T1072 pobj complexes,of
R579 T1075 T1076 nmod Schizosaccharomyces,pombe
R580 T1076 T1074 nmod pombe,complexes
R581 T1077 T1076 cc and,pombe
R582 T1078 T1079 compound mouse,Mcm4
R583 T1079 T1076 conj Mcm4,pombe
R584 T1080 T1079 punct /,Mcm4
R585 T1081 T1079 nummod 6,Mcm4
R586 T1082 T1079 punct /,Mcm4
R587 T1083 T1079 nummod 7,Mcm4
R588 T1084 T1065 auxpass is,stimulated
R589 T1085 T1065 advmod significantly,stimulated
R590 T1086 T1065 prep on,stimulated
R591 T1087 T1088 amod forked,DNA
R592 T1088 T1089 compound DNA,structures
R593 T1089 T1086 pobj structures,on
R594 T1090 T1065 cc and,stimulated
R595 T1091 T1092 nsubj it,unwind
R596 T1092 T1065 conj unwind,stimulated
R597 T1093 T1092 aux can,unwind
R598 T1094 T1095 compound duplex,DNA
R599 T1095 T1092 dobj DNA,unwind
R600 T1096 T1095 prep of,DNA
R601 T1097 T1098 quantmod 400,500
R602 T1098 T1100 nummod 500,bp
R603 T1099 T1098 punct –,500
R604 T1100 T1096 pobj bp,of
R605 T1101 T1102 punct (,14
R606 T1102 T1092 parataxis 14,unwind
R607 T1103 T1102 nummod 13,14
R608 T1104 T1102 punct ",",14
R609 T1105 T1102 punct ),14
R610 T1106 T1092 punct .,unwind
R611 T1108 T1109 nsubj Mcm4,binds
R612 T1110 T1108 punct /,Mcm4
R613 T1111 T1108 nummod 6,Mcm4
R614 T1112 T1108 punct /,Mcm4
R615 T1113 T1108 nummod 7,Mcm4
R616 T1114 T1109 prep to,binds
R617 T1115 T1116 nmod fork,structures
R618 T1116 T1114 pobj structures,to
R619 T1117 T1115 cc and,fork
R620 T1118 T1115 conj bubble,fork
R621 T1119 T1109 prep in,binds
R622 T1120 T1121 det an,manner
R623 T1121 T1119 pobj manner,in
R624 T1122 T1123 npadvmod ATP,dependent
R625 T1123 T1121 amod dependent,manner
R626 T1124 T1123 punct -,dependent
R627 T1125 T1109 punct ", ",binds
R628 T1126 T1109 cc and,binds

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T692 12-23 GO:0006260 denotes replicative
T693 24-32 GO_EXT:0004386 denotes helicase
T694 95-120 NCBITaxon:4896 denotes Schizosaccharomyces pombe
T695 125-130 NCBITaxon:10088 denotes mouse
T696 131-135 PR_EXT:000010246 denotes Mcm4
T697 131-149 GO:0097373 denotes Mcm4/6/7 complexes
T698 181-187 GO:0005657 denotes forked
T699 188-191 CHEBI_SO_EXT:DNA denotes DNA
T700 221-231 CHEBI_SO_EXT:double_stranded_DNA denotes duplex DNA
T701 243-245 SO_EXT:0000028 denotes bp
T702 255-259 PR_EXT:000010246 denotes Mcm4
T703 255-263 GO:0097373 denotes Mcm4/6/7
T704 264-269 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes binds
T705 273-277 GO:0005657 denotes fork
T706 306-309 CHEBI_EXT:ATP denotes ATP

craft-ca-core-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T583 12-23 GO:0006260 denotes replicative
T584 95-120 NCBITaxon:4896 denotes Schizosaccharomyces pombe
T585 125-130 NCBITaxon:10088 denotes mouse
T586 131-135 PR:000010246 denotes Mcm4
T587 131-149 GO:0097373 denotes Mcm4/6/7 complexes
T588 181-187 GO:0005657 denotes forked
T589 221-227 SO:0000985 denotes duplex
T590 243-245 SO:0000028 denotes bp
T591 255-259 PR:000010246 denotes Mcm4
T592 255-263 GO:0097373 denotes Mcm4/6/7
T593 273-277 GO:0005657 denotes fork

2_test

Id Subject Object Predicate Lexical cue
15917436-9335335-76775493 34-36 9335335 denotes 19
15917436-10834843-76775494 37-39 10834843 denotes 20
15917436-14609960-76775495 247-249 14609960 denotes 13
15917436-11136247-76775496 250-252 11136247 denotes 14