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PMC:1140370 / 293-615 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T195 7-10 NN denotes DNA
T199 10-11 . denotes .
T200 11-105 sentence denotes Here, we examined its substrate preference and helicase actions using various synthetic DNAs.
T201 12-16 RB denotes Here
T202 21-29 VBD denotes examined
T203 16-18 , denotes ,
T204 18-20 PRP denotes we
T205 30-33 PRP$ denotes its
T206 44-54 NN denotes preference
T207 34-43 NN denotes substrate
T208 55-58 CC denotes and
T209 59-67 NN denotes helicase
T210 68-75 NNS denotes actions
T211 76-81 VBG denotes using
T212 82-89 JJ denotes various
T213 100-104 NNS denotes DNAs
T214 90-99 JJ denotes synthetic
T215 104-105 . denotes .
T216 105-289 sentence denotes On a bubble substrate, Mcm4/6/7 makes symmetric dual contacts with the 5′-proximal 25 nt single-stranded segments adjacent to the branch points, presumably generating double hexamers.
T217 106-108 IN denotes On
T218 138-143 VBZ denotes makes
T219 109-110 DT denotes a
T220 118-127 NN denotes substrate
T221 111-117 NN denotes bubble
T222 127-129 , denotes ,
T223 129-133 NN denotes Mcm4
T224 133-134 HYPH denotes /
T225 134-135 CD denotes 6
T226 135-136 HYPH denotes /
T227 136-137 CD denotes 7
T228 144-153 JJ denotes symmetric
T229 159-167 NNS denotes contacts
T230 154-158 JJ denotes dual
T231 168-172 IN denotes with
T232 173-176 DT denotes the
T233 211-219 NNS denotes segments
T234 177-178 CD denotes 5
T235 180-188 JJ denotes proximal
T236 178-179 SYM denotes ′
T237 179-180 HYPH denotes -
T238 189-191 CD denotes 25
T239 192-194 NN denotes nt
T240 195-201 JJ denotes single
T241 202-210 VBN denotes stranded
T242 201-202 HYPH denotes -
T243 220-228 JJ denotes adjacent
T244 229-231 IN denotes to
T245 232-235 DT denotes the
T246 243-249 NNS denotes points
T247 236-242 NN denotes branch
T248 249-251 , denotes ,
T249 251-261 RB denotes presumably
T250 262-272 VBG denotes generating
T251 273-279 JJ denotes double
T252 280-288 NNS denotes hexamers
T253 288-289 . denotes .
T255 290-294 NN denotes Loss
T257 295-297 IN denotes of
T258 298-305 NN denotes thymine
T259 306-314 NNS denotes residues
T260 315-319 IN denotes from
R75 T201 T202 advmod Here,examined
R77 T203 T202 punct ", ",examined
R79 T204 T202 nsubj we,examined
R80 T205 T206 poss its,preference
R82 T206 T202 dobj preference,examined
R83 T207 T206 compound substrate,preference
R84 T208 T206 cc and,preference
R86 T209 T210 compound helicase,actions
R87 T210 T206 conj actions,preference
R89 T211 T202 advcl using,examined
R90 T212 T213 amod various,DNAs
R92 T213 T211 dobj DNAs,using
R93 T214 T213 amod synthetic,DNAs
R95 T215 T202 punct .,examined
R96 T217 T218 prep On,makes
R98 T219 T220 det a,substrate
R100 T220 T217 pobj substrate,On
R102 T221 T220 compound bubble,substrate
R103 T222 T218 punct ", ",makes
R104 T223 T218 nsubj Mcm4,makes
R105 T224 T223 punct /,Mcm4
R106 T225 T223 nummod 6,Mcm4
R107 T226 T223 punct /,Mcm4
R109 T227 T223 nummod 7,Mcm4
R110 T228 T229 amod symmetric,contacts
R112 T229 T218 dobj contacts,makes
R113 T230 T229 amod dual,contacts
R114 T231 T229 prep with,contacts
R116 T232 T233 det the,segments
R117 T233 T231 pobj segments,with
R119 T234 T235 npadvmod 5,proximal
R120 T235 T233 amod proximal,segments
R121 T236 T234 punct ′,5
R122 T237 T235 punct -,proximal
R123 T238 T239 nummod 25,nt
R126 T239 T233 nmod nt,segments
R128 T240 T241 amod single,stranded
R129 T241 T233 amod stranded,segments
R131 T242 T241 punct -,stranded
R132 T243 T233 amod adjacent,segments
R134 T244 T243 prep to,adjacent
R135 T245 T246 det the,points
R137 T246 T244 pobj points,to
R138 T247 T246 compound branch,points
R140 T248 T218 punct ", ",makes
R141 T249 T250 advmod presumably,generating
R143 T250 T218 advcl generating,makes
R144 T251 T252 amod double,hexamers
R146 T252 T250 dobj hexamers,generating
R147 T253 T218 punct .,makes
R151 T257 T255 prep of,Loss
R152 T258 T259 compound thymine,residues
R153 T259 T257 pobj residues,of
R156 T260 T255 prep from,Loss

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T102 59-67 GO_EXT:0004386 denotes helicase
T103 100-104 CHEBI_SO_EXT:DNA denotes DNAs
T104 129-133 PR_EXT:000010246 denotes Mcm4
T105 129-137 GO:0097373 denotes Mcm4/6/7
T106 192-194 CHEBI_SO_EXT:nucleotide denotes nt
T107 195-210 SO:0000984 denotes single-stranded
T108 273-288 GO_EXT:double_hexameric_macromolecular_complex denotes double hexamers
T109 298-305 CHEBI_EXT:thymine_nucleobase_or_nucleoside_or_nucleotide_molecular_entity_or_group denotes thymine
T110 306-314 CHEBI_EXT:residue denotes residues

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T64 129-133 PR:000010246 denotes Mcm4
T65 129-137 GO:0097373 denotes Mcm4/6/7
T66 195-210 SO:0000984 denotes single-stranded