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PMC:1140370 / 22700-24153 JSONTXT

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Id Subject Object Predicate Lexical cue
T7020 0-3 PRP$ denotes Our
T7021 13-20 NNS denotes studies
T7022 4-12 JJ denotes previous
T7023 26-31 VBN denotes shown
T7024 21-25 VBP denotes have
T7025 32-36 IN denotes that
T7026 149-154 VB denotes serve
T7027 37-40 DT denotes the
T7028 41-50 NNS denotes sequences
T7029 51-61 VBG denotes containing
T7030 62-70 JJ denotes periodic
T7031 77-83 NNS denotes tracts
T7032 71-72 -LRB- denotes (
T7033 75-76 NN denotes n
T7034 72-74 NN denotes dT
T7035 74-75 -RRB- denotes )
T7036 84-91 VBN denotes derived
T7037 92-96 IN denotes from
T7038 97-100 DT denotes the
T7039 116-122 NN denotes origin
T7040 101-106 JJ denotes human
T7041 107-112 NN denotes lamin
T7042 113-115 NN denotes B2
T7043 123-124 -LRB- denotes (
T7044 136-143 NN denotes content
T7045 124-126 CD denotes 48
T7046 126-127 NN denotes %
T7047 128-135 NN denotes thymine
T7048 143-144 -RRB- denotes )
T7049 145-148 MD denotes can
T7050 155-157 IN denotes as
T7051 158-160 DT denotes an
T7052 171-180 NN denotes activator
T7053 161-170 JJ denotes efficient
T7054 181-184 IN denotes for
T7055 185-188 DT denotes the
T7056 193-201 NN denotes helicase
T7057 189-192 NN denotes Mcm
T7058 202-204 IN denotes on
T7059 205-206 DT denotes a
T7060 207-213 NN denotes bubble
T7061 213-215 , denotes ,
T7062 215-218 CC denotes and
T7063 219-230 NN denotes replacement
T7064 257-266 VBD denotes abolished
T7065 231-233 IN denotes of
T7066 234-242 NNS denotes thymines
T7067 243-247 IN denotes with
T7068 248-256 NNS denotes guanines
T7069 267-270 DT denotes the
T7070 280-290 NN denotes activation
T7071 271-279 NN denotes helicase
T7072 291-292 -LRB- denotes (
T7073 295-297 CD denotes 28
T7074 292-294 CD denotes 13
T7075 294-295 , denotes ,
T7076 297-298 -RRB- denotes )
T7077 298-299 . denotes .
T7078 299-657 sentence denotes In order to examine other natural replication origins with different thymine contents for the ability to activate Mcm helicase on a bubble substrate, we constructed new bubble substrates, Bub82/c-myc, containing sequences derived from the DUE (DNA unwinding element) region of the human c-myc origin which is essential for c-myc replicator activity (29,30).
T7079 300-302 IN denotes In
T7080 453-464 VBD denotes constructed
T7081 303-308 NN denotes order
T7082 309-311 TO denotes to
T7083 312-319 VB denotes examine
T7084 320-325 JJ denotes other
T7085 346-353 NNS denotes origins
T7086 326-333 JJ denotes natural
T7087 334-345 NN denotes replication
T7088 354-358 IN denotes with
T7089 359-368 JJ denotes different
T7090 377-385 NNS denotes contents
T7091 369-376 NN denotes thymine
T7092 386-389 IN denotes for
T7093 390-393 DT denotes the
T7094 394-401 NN denotes ability
T7095 402-404 TO denotes to
T7096 405-413 VB denotes activate
T7097 414-417 NN denotes Mcm
T7098 418-426 NN denotes helicase
T7099 427-429 IN denotes on
T7100 430-431 DT denotes a
T7101 439-448 NN denotes substrate
T7102 432-438 NN denotes bubble
T7103 448-450 , denotes ,
T7104 450-452 PRP denotes we
T7105 465-468 JJ denotes new
T7106 476-486 NNS denotes substrates
T7107 469-475 NN denotes bubble
T7108 486-488 , denotes ,
T7109 488-493 NN denotes Bub82
T7110 496-499 NN denotes myc
T7111 493-494 HYPH denotes /
T7112 494-495 NN denotes c
T7113 495-496 HYPH denotes -
T7114 499-501 , denotes ,
T7115 501-511 VBG denotes containing
T7116 512-521 NNS denotes sequences
T7117 522-529 VBN denotes derived
T7118 530-534 IN denotes from
T7119 535-538 DT denotes the
T7120 567-573 NN denotes region
T7121 539-542 NN denotes DUE
T7122 543-544 -LRB- denotes (
T7123 544-547 NN denotes DNA
T7124 558-565 NN denotes element
T7125 548-557 NN denotes unwinding
T7126 565-566 -RRB- denotes )
T7127 574-576 IN denotes of
T7128 577-580 DT denotes the
T7129 593-599 NN denotes origin
T7130 581-586 JJ denotes human
T7131 587-588 NN denotes c
T7132 589-592 NN denotes myc
T7133 588-589 HYPH denotes -
T7134 600-605 WDT denotes which
T7135 606-608 VBZ denotes is
T7136 609-618 JJ denotes essential
T7137 619-622 IN denotes for
T7138 623-624 NN denotes c
T7139 625-628 NN denotes myc
T7140 624-625 HYPH denotes -
T7141 640-648 NN denotes activity
T7142 629-639 NN denotes replicator
T7143 649-650 -LRB- denotes (
T7144 653-655 CD denotes 30
T7145 650-652 CD denotes 29
T7146 652-653 , denotes ,
T7147 655-656 -RRB- denotes )
T7148 656-657 . denotes .
T7149 657-779 sentence denotes The unpaired segment in Bub82/c-myc/DUE contains one strand of DUE and that in Bub82/c-myc/DUE-C contains another strand.
T7150 658-661 DT denotes The
T7151 671-678 NN denotes segment
T7152 662-670 JJ denotes unpaired
T7153 698-706 VBZ denotes contains
T7154 679-681 IN denotes in
T7155 682-687 NN denotes Bub82
T7156 694-697 NN denotes DUE
T7157 687-688 HYPH denotes /
T7158 688-689 NN denotes c
T7159 690-693 NN denotes myc
T7160 689-690 HYPH denotes -
T7161 693-694 HYPH denotes /
T7162 707-710 CD denotes one
T7163 711-717 NN denotes strand
T7164 718-720 IN denotes of
T7165 721-724 NN denotes DUE
T7166 725-728 CC denotes and
T7167 729-733 DT denotes that
T7168 755-763 VBZ denotes contains
T7169 734-736 IN denotes in
T7170 737-742 NN denotes Bub82
T7171 753-754 NN denotes C
T7172 742-743 HYPH denotes /
T7173 743-744 NN denotes c
T7174 745-748 NN denotes myc
T7175 744-745 HYPH denotes -
T7176 748-749 HYPH denotes /
T7177 749-752 NN denotes DUE
T7178 752-753 HYPH denotes -
T7179 764-771 DT denotes another
T7180 772-778 NN denotes strand
T7181 778-779 . denotes .
T7182 779-941 sentence denotes This DUE is believed to coincide with the initially unwound region of the c-myc origin (29), and its deletion substantially reduced the replicator activity (30).
T7183 780-784 DT denotes This
T7184 785-788 NN denotes DUE
T7185 792-800 VBN denotes believed
T7186 789-791 VBZ denotes is
T7187 801-803 TO denotes to
T7188 804-812 VB denotes coincide
T7189 813-817 IN denotes with
T7190 818-821 DT denotes the
T7191 840-846 NN denotes region
T7192 822-831 RB denotes initially
T7193 832-839 JJ denotes unwound
T7194 847-849 IN denotes of
T7195 850-853 DT denotes the
T7196 860-866 NN denotes origin
T7197 854-855 NN denotes c
T7198 856-859 NN denotes myc
T7199 855-856 HYPH denotes -
T7200 867-868 -LRB- denotes (
T7201 868-870 CD denotes 29
T7202 870-871 -RRB- denotes )
T7203 871-873 , denotes ,
T7204 873-876 CC denotes and
T7205 877-880 PRP$ denotes its
T7206 881-889 NN denotes deletion
T7207 904-911 VBD denotes reduced
T7208 890-903 RB denotes substantially
T7209 912-915 DT denotes the
T7210 927-935 NN denotes activity
T7211 916-926 NN denotes replicator
T7212 936-937 -LRB- denotes (
T7213 937-939 CD denotes 30
T7214 939-940 -RRB- denotes )
T7215 940-941 . denotes .
T7216 941-1187 sentence denotes Mcm4/6/7 unwound Bub82/lamin B2 (thymine 48%), Bub82/c-myc/DUE (37%) and Bub82/c-myc/DUE-C (39%) with similar efficiency (Figure 7A), indicating that the sequences from the c-myc origin also can serve as efficient activators of the Mcm helicase.
T7217 942-946 NN denotes Mcm4
T7218 951-958 VBN denotes unwound
T7219 946-947 HYPH denotes /
T7220 947-948 CD denotes 6
T7221 948-949 HYPH denotes /
T7222 949-950 CD denotes 7
T7223 959-964 NN denotes Bub82
T7224 971-973 NN denotes B2
T7225 964-965 HYPH denotes /
T7226 965-970 NN denotes lamin
T7227 974-975 -LRB- denotes (
T7228 985-986 NN denotes %
T7229 975-982 NN denotes thymine
T7230 983-985 CD denotes 48
T7231 986-987 -RRB- denotes )
T7232 987-989 , denotes ,
T7233 989-994 NN denotes Bub82
T7234 1001-1004 NN denotes DUE
T7235 994-995 HYPH denotes /
T7236 995-996 NN denotes c
T7237 997-1000 NN denotes myc
T7238 996-997 HYPH denotes -
T7239 1000-1001 HYPH denotes /
T7240 1005-1006 -LRB- denotes (
T7241 1008-1009 NN denotes %
T7242 1006-1008 CD denotes 37
T7243 1009-1010 -RRB- denotes )
T7244 1011-1014 CC denotes and
T7245 1015-1020 NN denotes Bub82
T7246 1031-1032 NN denotes C
T7247 1020-1021 HYPH denotes /
T7248 1021-1022 NN denotes c
T7249 1023-1026 NN denotes myc
T7250 1022-1023 HYPH denotes -
T7251 1026-1027 HYPH denotes /
T7252 1027-1030 NN denotes DUE
T7253 1030-1031 HYPH denotes -
T7254 1033-1034 -LRB- denotes (
T7255 1036-1037 NN denotes %
T7256 1034-1036 CD denotes 39
T7257 1037-1038 -RRB- denotes )
T7258 1039-1043 IN denotes with
T7259 1044-1051 JJ denotes similar
T7260 1052-1062 NN denotes efficiency
T7261 1063-1064 -LRB- denotes (
T7262 1071-1073 NN denotes 7A
T7263 1064-1070 NN denotes Figure
T7264 1073-1074 -RRB- denotes )
T7265 1074-1076 , denotes ,
T7266 1076-1086 VBG denotes indicating
T7267 1087-1091 IN denotes that
T7268 1137-1142 VB denotes serve
T7269 1092-1095 DT denotes the
T7270 1096-1105 NNS denotes sequences
T7271 1106-1110 IN denotes from
T7272 1111-1114 DT denotes the
T7273 1121-1127 NN denotes origin
T7274 1115-1116 NN denotes c
T7275 1117-1120 NN denotes myc
T7276 1116-1117 HYPH denotes -
T7277 1128-1132 RB denotes also
T7278 1133-1136 MD denotes can
T7279 1143-1145 IN denotes as
T7280 1146-1155 JJ denotes efficient
T7281 1156-1166 NNS denotes activators
T7282 1167-1169 IN denotes of
T7283 1170-1173 DT denotes the
T7284 1178-1186 NN denotes helicase
T7285 1174-1177 NN denotes Mcm
T7286 1186-1187 . denotes .
T7287 1187-1453 sentence denotes This result also indicates that sequences with 37% thymine content can activate Mcm4/6/7 to displace 24 nt duplex on both sides in a bubble substrate, suggesting that the not only thymine content but also the sequence context may affect the Mcm helicase activation.
T7288 1188-1192 DT denotes This
T7289 1193-1199 NN denotes result
T7290 1205-1214 VBZ denotes indicates
T7291 1200-1204 RB denotes also
T7292 1215-1219 IN denotes that
T7293 1259-1267 VB denotes activate
T7294 1220-1229 NNS denotes sequences
T7295 1230-1234 IN denotes with
T7296 1235-1237 CD denotes 37
T7297 1237-1238 NN denotes %
T7298 1247-1254 NN denotes content
T7299 1239-1246 NN denotes thymine
T7300 1255-1258 MD denotes can
T7301 1268-1272 NN denotes Mcm4
T7302 1272-1273 HYPH denotes /
T7303 1273-1274 CD denotes 6
T7304 1274-1275 HYPH denotes /
T7305 1275-1276 CD denotes 7
T7306 1277-1279 TO denotes to
T7307 1280-1288 VB denotes displace
T7308 1289-1291 CD denotes 24
T7309 1292-1294 NN denotes nt
T7310 1295-1301 NN denotes duplex
T7311 1302-1304 IN denotes on
T7312 1305-1309 DT denotes both
T7313 1310-1315 NNS denotes sides
T7314 1316-1318 IN denotes in
T7315 1319-1320 DT denotes a
T7316 1328-1337 NN denotes substrate
T7317 1321-1327 NN denotes bubble
T7318 1337-1339 , denotes ,
T7319 1339-1349 VBG denotes suggesting
T7320 1350-1354 IN denotes that
T7321 1418-1424 VB denotes affect
T7322 1355-1358 DT denotes the
T7323 1376-1383 NN denotes content
T7324 1359-1362 RB denotes not
T7325 1363-1367 RB denotes only
T7326 1368-1375 NN denotes thymine
T7327 1384-1387 CC denotes but
T7328 1388-1392 RB denotes also
T7329 1393-1396 DT denotes the
T7330 1406-1413 NN denotes context
T7331 1397-1405 NN denotes sequence
T7332 1414-1417 MD denotes may
T7333 1425-1428 DT denotes the
T7334 1442-1452 NN denotes activation
T7335 1429-1432 NN denotes Mcm
T7336 1433-1441 NN denotes helicase
T7337 1452-1453 . denotes .
R4721 T7020 T7021 poss Our,studies
R4722 T7021 T7023 nsubj studies,shown
R4723 T7022 T7021 amod previous,studies
R4724 T7024 T7023 aux have,shown
R4725 T7025 T7026 mark that,serve
R4726 T7026 T7023 ccomp serve,shown
R4727 T7027 T7028 det the,sequences
R4728 T7028 T7026 nsubj sequences,serve
R4729 T7029 T7028 acl containing,sequences
R4730 T7030 T7031 amod periodic,tracts
R4731 T7031 T7029 dobj tracts,containing
R4732 T7032 T7033 punct (,n
R4733 T7033 T7031 compound n,tracts
R4734 T7034 T7033 nmod dT,n
R4735 T7035 T7033 punct ),n
R4736 T7036 T7031 acl derived,tracts
R4737 T7037 T7036 prep from,derived
R4738 T7038 T7039 det the,origin
R4739 T7039 T7037 pobj origin,from
R4740 T7040 T7039 amod human,origin
R4741 T7041 T7042 compound lamin,B2
R4742 T7042 T7039 compound B2,origin
R4743 T7043 T7044 punct (,content
R4744 T7044 T7039 parataxis content,origin
R4745 T7045 T7046 nummod 48,%
R4746 T7046 T7044 compound %,content
R4747 T7047 T7044 compound thymine,content
R4748 T7048 T7044 punct ),content
R4749 T7049 T7026 aux can,serve
R4750 T7050 T7026 prep as,serve
R4751 T7051 T7052 det an,activator
R4752 T7052 T7050 pobj activator,as
R4753 T7053 T7052 amod efficient,activator
R4754 T7054 T7052 prep for,activator
R4755 T7055 T7056 det the,helicase
R4756 T7056 T7054 pobj helicase,for
R4757 T7057 T7056 compound Mcm,helicase
R4758 T7058 T7026 prep on,serve
R4759 T7059 T7060 det a,bubble
R4760 T7060 T7058 pobj bubble,on
R4761 T7061 T7023 punct ", ",shown
R4762 T7062 T7023 cc and,shown
R4763 T7063 T7064 nsubj replacement,abolished
R4764 T7064 T7023 conj abolished,shown
R4765 T7065 T7063 prep of,replacement
R4766 T7066 T7065 pobj thymines,of
R4767 T7067 T7063 prep with,replacement
R4768 T7068 T7067 pobj guanines,with
R4769 T7069 T7070 det the,activation
R4770 T7070 T7064 dobj activation,abolished
R4771 T7071 T7070 compound helicase,activation
R4772 T7072 T7073 punct (,28
R4773 T7073 T7064 parataxis 28,abolished
R4774 T7074 T7073 nummod 13,28
R4775 T7075 T7073 punct ",",28
R4776 T7076 T7073 punct ),28
R4777 T7077 T7064 punct .,abolished
R4778 T7079 T7080 prep In,constructed
R4779 T7081 T7079 pobj order,In
R4780 T7082 T7083 aux to,examine
R4781 T7083 T7081 acl examine,order
R4782 T7084 T7085 amod other,origins
R4783 T7085 T7083 dobj origins,examine
R4784 T7086 T7085 amod natural,origins
R4785 T7087 T7085 compound replication,origins
R4786 T7088 T7085 prep with,origins
R4787 T7089 T7090 amod different,contents
R4788 T7090 T7088 pobj contents,with
R4789 T7091 T7090 compound thymine,contents
R4790 T7092 T7083 prep for,examine
R4791 T7093 T7094 det the,ability
R4792 T7094 T7092 pobj ability,for
R4793 T7095 T7096 aux to,activate
R4794 T7096 T7094 acl activate,ability
R4795 T7097 T7098 compound Mcm,helicase
R4796 T7098 T7096 dobj helicase,activate
R4797 T7099 T7096 prep on,activate
R4798 T7100 T7101 det a,substrate
R4799 T7101 T7099 pobj substrate,on
R4800 T7102 T7101 compound bubble,substrate
R4801 T7103 T7080 punct ", ",constructed
R4802 T7104 T7080 nsubj we,constructed
R4803 T7105 T7106 amod new,substrates
R4804 T7106 T7080 dobj substrates,constructed
R4805 T7107 T7106 compound bubble,substrates
R4806 T7108 T7106 punct ", ",substrates
R4807 T7109 T7110 compound Bub82,myc
R4808 T7110 T7106 appos myc,substrates
R4809 T7111 T7110 punct /,myc
R4810 T7112 T7110 compound c,myc
R4811 T7113 T7110 punct -,myc
R4812 T7114 T7106 punct ", ",substrates
R4813 T7115 T7106 acl containing,substrates
R4814 T7116 T7115 dobj sequences,containing
R4815 T7117 T7116 acl derived,sequences
R4816 T7118 T7117 prep from,derived
R4817 T7119 T7120 det the,region
R4818 T7120 T7118 pobj region,from
R4819 T7121 T7120 nmod DUE,region
R4820 T7122 T7121 punct (,DUE
R4821 T7123 T7124 compound DNA,element
R4822 T7124 T7121 appos element,DUE
R4823 T7125 T7124 compound unwinding,element
R4824 T7126 T7120 punct ),region
R4825 T7127 T7120 prep of,region
R4826 T7128 T7129 det the,origin
R4827 T7129 T7127 pobj origin,of
R4828 T7130 T7129 amod human,origin
R4829 T7131 T7132 compound c,myc
R4830 T7132 T7129 compound myc,origin
R4831 T7133 T7132 punct -,myc
R4832 T7134 T7135 dep which,is
R4833 T7135 T7120 relcl is,region
R4834 T7136 T7135 acomp essential,is
R4835 T7137 T7136 prep for,essential
R4836 T7138 T7139 compound c,myc
R4837 T7139 T7141 compound myc,activity
R4838 T7140 T7139 punct -,myc
R4839 T7141 T7137 pobj activity,for
R4840 T7142 T7141 compound replicator,activity
R4841 T7143 T7144 punct (,30
R4842 T7144 T7135 parataxis 30,is
R4843 T7145 T7144 nummod 29,30
R4844 T7146 T7144 punct ",",30
R4845 T7147 T7144 punct ),30
R4846 T7148 T7080 punct .,constructed
R4847 T7150 T7151 det The,segment
R4848 T7151 T7153 nsubj segment,contains
R4849 T7152 T7151 amod unpaired,segment
R4850 T7154 T7151 prep in,segment
R4851 T7155 T7156 compound Bub82,DUE
R4852 T7156 T7154 pobj DUE,in
R4853 T7157 T7156 punct /,DUE
R4854 T7158 T7159 compound c,myc
R4855 T7159 T7156 compound myc,DUE
R4856 T7160 T7159 punct -,myc
R4857 T7161 T7156 punct /,DUE
R4858 T7162 T7163 nummod one,strand
R4859 T7163 T7153 dobj strand,contains
R4860 T7164 T7163 prep of,strand
R4861 T7165 T7164 pobj DUE,of
R4862 T7166 T7153 cc and,contains
R4863 T7167 T7168 nsubj that,contains
R4864 T7168 T7153 conj contains,contains
R4865 T7169 T7167 prep in,that
R4866 T7170 T7171 compound Bub82,C
R4867 T7171 T7169 pobj C,in
R4868 T7172 T7171 punct /,C
R4869 T7173 T7174 compound c,myc
R4870 T7174 T7171 compound myc,C
R4871 T7175 T7174 punct -,myc
R4872 T7176 T7171 punct /,C
R4873 T7177 T7171 compound DUE,C
R4874 T7178 T7171 punct -,C
R4875 T7179 T7180 det another,strand
R4876 T7180 T7168 dobj strand,contains
R4877 T7181 T7168 punct .,contains
R4878 T7183 T7184 det This,DUE
R4879 T7184 T7185 nsubjpass DUE,believed
R4880 T7186 T7185 auxpass is,believed
R4881 T7187 T7188 aux to,coincide
R4882 T7188 T7185 xcomp coincide,believed
R4883 T7189 T7188 prep with,coincide
R4884 T7190 T7191 det the,region
R4885 T7191 T7189 pobj region,with
R4886 T7192 T7193 advmod initially,unwound
R4887 T7193 T7191 amod unwound,region
R4888 T7194 T7191 prep of,region
R4889 T7195 T7196 det the,origin
R4890 T7196 T7194 pobj origin,of
R4891 T7197 T7198 compound c,myc
R4892 T7198 T7196 compound myc,origin
R4893 T7199 T7198 punct -,myc
R4894 T7200 T7201 punct (,29
R4895 T7201 T7188 parataxis 29,coincide
R4896 T7202 T7201 punct ),29
R4897 T7203 T7185 punct ", ",believed
R4898 T7204 T7185 cc and,believed
R4899 T7205 T7206 poss its,deletion
R4900 T7206 T7207 nsubj deletion,reduced
R4901 T7207 T7185 conj reduced,believed
R4902 T7208 T7207 advmod substantially,reduced
R4903 T7209 T7210 det the,activity
R4904 T7210 T7207 dobj activity,reduced
R4905 T7211 T7210 compound replicator,activity
R4906 T7212 T7213 punct (,30
R4907 T7213 T7207 parataxis 30,reduced
R4908 T7214 T7213 punct ),30
R4909 T7215 T7207 punct .,reduced
R4910 T7217 T7218 nsubj Mcm4,unwound
R4911 T7219 T7217 punct /,Mcm4
R4912 T7220 T7217 nummod 6,Mcm4
R4913 T7221 T7217 punct /,Mcm4
R4914 T7222 T7217 nummod 7,Mcm4
R4915 T7223 T7224 compound Bub82,B2
R4916 T7224 T7218 dobj B2,unwound
R4917 T7225 T7224 punct /,B2
R4918 T7226 T7224 compound lamin,B2
R4919 T7227 T7228 punct (,%
R4920 T7228 T7224 parataxis %,B2
R4921 T7229 T7228 nmod thymine,%
R4922 T7230 T7228 nummod 48,%
R4923 T7231 T7228 punct ),%
R4924 T7232 T7224 punct ", ",B2
R4925 T7233 T7234 compound Bub82,DUE
R4926 T7234 T7224 conj DUE,B2
R4927 T7235 T7234 punct /,DUE
R4928 T7236 T7237 compound c,myc
R4929 T7237 T7234 compound myc,DUE
R4930 T7238 T7237 punct -,myc
R4931 T7239 T7234 punct /,DUE
R4932 T7240 T7241 punct (,%
R4933 T7241 T7234 parataxis %,DUE
R4934 T7242 T7241 nummod 37,%
R4935 T7243 T7241 punct ),%
R4936 T7244 T7234 cc and,DUE
R4937 T7245 T7246 compound Bub82,C
R4938 T7246 T7234 conj C,DUE
R4939 T7247 T7246 punct /,C
R4940 T7248 T7249 compound c,myc
R4941 T7249 T7246 compound myc,C
R4942 T7250 T7249 punct -,myc
R4943 T7251 T7246 punct /,C
R4944 T7252 T7246 compound DUE,C
R4945 T7253 T7246 punct -,C
R4946 T7254 T7255 punct (,%
R4947 T7255 T7246 parataxis %,C
R4948 T7256 T7255 nummod 39,%
R4949 T7257 T7255 punct ),%
R4950 T7258 T7218 prep with,unwound
R4951 T7259 T7260 amod similar,efficiency
R4952 T7260 T7258 pobj efficiency,with
R4953 T7261 T7262 punct (,7A
R4954 T7262 T7260 parataxis 7A,efficiency
R4955 T7263 T7262 compound Figure,7A
R4956 T7264 T7262 punct ),7A
R4957 T7265 T7218 punct ", ",unwound
R4958 T7266 T7218 advcl indicating,unwound
R4959 T7267 T7268 mark that,serve
R4960 T7268 T7266 ccomp serve,indicating
R4961 T7269 T7270 det the,sequences
R4962 T7270 T7268 nsubj sequences,serve
R4963 T7271 T7270 prep from,sequences
R4964 T7272 T7273 det the,origin
R4965 T7273 T7271 pobj origin,from
R4966 T7274 T7275 compound c,myc
R4967 T7275 T7273 compound myc,origin
R4968 T7276 T7275 punct -,myc
R4969 T7277 T7268 advmod also,serve
R4970 T7278 T7268 aux can,serve
R4971 T7279 T7268 prep as,serve
R4972 T7280 T7281 amod efficient,activators
R4973 T7281 T7279 pobj activators,as
R4974 T7282 T7281 prep of,activators
R4975 T7283 T7284 det the,helicase
R4976 T7284 T7282 pobj helicase,of
R4977 T7285 T7284 compound Mcm,helicase
R4978 T7286 T7218 punct .,unwound
R4979 T7288 T7289 det This,result
R4980 T7289 T7290 nsubj result,indicates
R4981 T7291 T7290 advmod also,indicates
R4982 T7292 T7293 mark that,activate
R4983 T7293 T7290 ccomp activate,indicates
R4984 T7294 T7293 nsubj sequences,activate
R4985 T7295 T7294 prep with,sequences
R4986 T7296 T7297 nummod 37,%
R4987 T7297 T7298 compound %,content
R4988 T7298 T7295 pobj content,with
R4989 T7299 T7298 compound thymine,content
R4990 T7300 T7293 aux can,activate
R4991 T7301 T7293 dobj Mcm4,activate
R4992 T7302 T7301 punct /,Mcm4
R4993 T7303 T7301 nummod 6,Mcm4
R4994 T7304 T7301 punct /,Mcm4
R4995 T7305 T7301 nummod 7,Mcm4
R4996 T7306 T7307 aux to,displace
R4997 T7307 T7293 advcl displace,activate
R4998 T7308 T7309 nummod 24,nt
R4999 T7309 T7310 compound nt,duplex
R5000 T7310 T7307 dobj duplex,displace
R5001 T7311 T7307 prep on,displace
R5002 T7312 T7313 det both,sides
R5003 T7313 T7311 pobj sides,on
R5004 T7314 T7307 prep in,displace
R5005 T7315 T7316 det a,substrate
R5006 T7316 T7314 pobj substrate,in
R5007 T7317 T7316 compound bubble,substrate
R5008 T7318 T7293 punct ", ",activate
R5009 T7319 T7293 advcl suggesting,activate
R5010 T7320 T7321 mark that,affect
R5011 T7321 T7319 ccomp affect,suggesting
R5012 T7322 T7323 det the,content
R5013 T7323 T7321 nsubj content,affect
R5014 T7324 T7323 preconj not,content
R5015 T7325 T7324 advmod only,not
R5016 T7326 T7323 compound thymine,content
R5017 T7327 T7323 cc but,content
R5018 T7328 T7327 advmod also,but
R5019 T7329 T7330 det the,context
R5020 T7330 T7323 conj context,content
R5021 T7331 T7330 compound sequence,context
R5022 T7332 T7321 aux may,affect
R5023 T7333 T7334 det the,activation
R5024 T7334 T7321 dobj activation,affect
R5025 T7335 T7336 compound Mcm,helicase
R5026 T7336 T7334 compound helicase,activation
R5027 T7337 T7290 punct .,indicates

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T6941 41-50 SO_EXT:biological_sequence denotes sequences
T6942 72-74 CHEBI_EXT:thymine_nucleobase_or_nucleoside_or_nucleotide_molecular_entity_or_group denotes dT
T6943 101-106 NCBITaxon:9606 denotes human
T6944 107-115 PR_EXT:000009861 denotes lamin B2
T6945 116-122 SO_EXT:0000296 denotes origin
T6946 128-135 CHEBI_EXT:thymine_nucleobase_or_nucleoside_or_nucleotide_molecular_entity_or_group denotes thymine
T6947 189-192 GO:0042555 denotes Mcm
T6948 193-201 GO_EXT:0004386 denotes helicase
T6949 219-230 SO_EXT:sequence_substitution_entity_or_process denotes replacement
T6950 234-242 CHEBI_EXT:thymine_nucleobase_or_nucleoside_or_nucleotide_molecular_entity_or_group denotes thymines
T6951 248-256 CHEBI_EXT:guanine_nucleobase_or_nucleoside_or_nucleotide_molecular_entity_or_group denotes guanines
T6952 271-279 GO_EXT:0004386 denotes helicase
T6953 334-345 GO:0006260 denotes replication
T6954 334-353 SO_EXT:0000296 denotes replication origins
T6955 369-376 CHEBI_EXT:thymine_nucleobase_or_nucleoside_or_nucleotide_molecular_entity_or_group denotes thymine
T6956 414-417 GO:0042555 denotes Mcm
T6957 418-426 GO_EXT:0004386 denotes helicase
T6958 494-499 PR_EXT:000000084 denotes c-myc
T6959 512-521 SO_EXT:biological_sequence denotes sequences
T6960 544-547 CHEBI_SO_EXT:DNA denotes DNA
T6961 544-557 GO:0032508 denotes DNA unwinding
T6962 581-586 NCBITaxon:9606 denotes human
T6963 587-592 PR_EXT:000000084 denotes c-myc
T6964 593-599 SO_EXT:0000296 denotes origin
T6965 623-628 PR_EXT:000000084 denotes c-myc
T6966 629-639 GO_EXT:DNA_replicator denotes replicator
T6967 662-670 SO:0000984 denotes unpaired
T6968 688-693 PR_EXT:000000084 denotes c-myc
T6969 743-748 PR_EXT:000000084 denotes c-myc
T6970 854-859 PR_EXT:000000084 denotes c-myc
T6971 860-866 SO_EXT:0000296 denotes origin
T6972 881-889 SO_EXT:sequence_deletion_entity_or_process denotes deletion
T6973 916-926 GO_EXT:DNA_replicator denotes replicator
T6974 942-946 PR_EXT:000010246 denotes Mcm4
T6975 942-950 GO:0097373 denotes Mcm4/6/7
T6976 965-973 PR_EXT:000009861 denotes lamin B2
T6977 975-982 CHEBI_EXT:thymine_nucleobase_or_nucleoside_or_nucleotide_molecular_entity_or_group denotes thymine
T6978 995-1000 PR_EXT:000000084 denotes c-myc
T6979 1021-1026 PR_EXT:000000084 denotes c-myc
T6980 1096-1105 SO_EXT:biological_sequence denotes sequences
T6981 1115-1120 PR_EXT:000000084 denotes c-myc
T6982 1121-1127 SO_EXT:0000296 denotes origin
T6983 1174-1177 GO:0042555 denotes Mcm
T6984 1178-1186 GO_EXT:0004386 denotes helicase
T6985 1220-1229 SO_EXT:biological_sequence denotes sequences
T6986 1239-1246 CHEBI_EXT:thymine_nucleobase_or_nucleoside_or_nucleotide_molecular_entity_or_group denotes thymine
T6987 1268-1272 PR_EXT:000010246 denotes Mcm4
T6988 1268-1276 GO:0097373 denotes Mcm4/6/7
T6989 1292-1294 CHEBI_SO_EXT:nucleotide denotes nt
T6990 1368-1375 CHEBI_EXT:thymine_nucleobase_or_nucleoside_or_nucleotide_molecular_entity_or_group denotes thymine
T6991 1397-1405 SO_EXT:biological_sequence denotes sequence
T6992 1429-1432 GO:0042555 denotes Mcm
T6993 1433-1441 GO_EXT:0004386 denotes helicase

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T6901 101-106 NCBITaxon:9606 denotes human
T6902 107-115 PR:000009861 denotes lamin B2
T6903 116-122 SO:0000296 denotes origin
T6904 189-192 GO:0042555 denotes Mcm
T6905 334-345 GO:0006260 denotes replication
T6906 334-353 SO:0000296 denotes replication origins
T6907 414-417 GO:0042555 denotes Mcm
T6908 494-499 PR:000000084 denotes c-myc
T6909 544-557 GO:0032508 denotes DNA unwinding
T6910 581-586 NCBITaxon:9606 denotes human
T6911 587-592 PR:000000084 denotes c-myc
T6912 593-599 SO:0000296 denotes origin
T6913 623-628 PR:000000084 denotes c-myc
T6914 662-670 SO:0000984 denotes unpaired
T6915 688-693 PR:000000084 denotes c-myc
T6916 743-748 PR:000000084 denotes c-myc
T6917 854-859 PR:000000084 denotes c-myc
T6918 860-866 SO:0000296 denotes origin
T6919 942-946 PR:000010246 denotes Mcm4
T6920 942-950 GO:0097373 denotes Mcm4/6/7
T6921 965-973 PR:000009861 denotes lamin B2
T6922 995-1000 PR:000000084 denotes c-myc
T6923 1021-1026 PR:000000084 denotes c-myc
T6924 1115-1120 PR:000000084 denotes c-myc
T6925 1121-1127 SO:0000296 denotes origin
T6926 1174-1177 GO:0042555 denotes Mcm
T6927 1268-1272 PR:000010246 denotes Mcm4
T6928 1268-1276 GO:0097373 denotes Mcm4/6/7
T6929 1429-1432 GO:0042555 denotes Mcm

2_test

Id Subject Object Predicate Lexical cue
15917436-14609960-76775523 292-294 14609960 denotes 13
15917436-10720330-76775524 295-297 10720330 denotes 28
15917436-7935372-76775525 650-652 7935372 denotes 29
15917436-12589000-76775526 653-655 12589000 denotes 30
15917436-7935372-76775527 868-870 7935372 denotes 29
15917436-12589000-76775528 937-939 12589000 denotes 30